Mercurial > repos > bgruening > hicexplorer_chicsignificantinteractions
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed @ 0:2f279a01f3ff draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
| author | bgruening |
|---|---|
| date | Mon, 16 Dec 2019 15:37:16 -0500 |
| parents | |
| children | 1db84db797b1 |
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| -1:000000000000 | 0:2f279a01f3ff |
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| 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3 | |
| 2 # This file contains the p-values computed by chi2 test | |
| 3 # To test the smoothed (float) values they were rounded up to the next integer | |
| 4 # | |
| 5 # Alpha level 0.5 | |
| 6 # Degrees of freedom 1 | |
| 7 # | |
| 8 # FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 | |
| 9 # MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 | |
| 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | |
| 11 chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335 | |
| 12 chr1 14285000 14308000 Eya1 7000 673.00000 389.40000 832.00000 479.80000 0.96904 | |
| 13 chr1 14310000 14322000 Eya1 21000 673.00000 54.80000 832.00000 52.80000 0.21097 | |
| 14 chr1 14361000 14407000 Eya1 106000 673.00000 21.20000 832.00000 36.00000 0.25281 | |
| 15 chr1 14426000 14432000 Eya1 131000 673.00000 2.40000 832.00000 9.00000 0.10924 | |
| 16 chr1 14447000 14455000 Eya1 154000 673.00000 4.40000 832.00000 12.40000 0.12863 | |
| 17 chr1 14460000 14465000 Eya1 164000 673.00000 3.20000 832.00000 7.60000 0.32025 | |
| 18 chr1 14491000 14500000 Eya1 199000 673.00000 17.65000 832.00000 15.75000 0.35033 |