Mercurial > repos > bgruening > hicexplorer_chicsignificantinteractions

view test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_accepted.bed @ 1:1db84db797b1 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author bgruening
date Wed, 05 Feb 2020 19:52:52 -0500
parents 2f279a01f3ff
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
# This file contains the p-values computed by fisher test
# To test the smoothed (float) values they were rounded up to the next integer
#
# Alpha level 0.5
# Degrees of freedom 1
#
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool	chr1_19093103_19093103	18.89  Mbp	19.29  Mbp	Tfap2d	Sum of interactions in fixate range: 472.0
# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool	chr1_19093103_19093103	18.89  Mbp	19.29  Mbp	Tfap2d	Sum of interactions in fixate range: 800.0
#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
chr1	19122000	19131000	Tfap2d	37000	472.00000	10.20000	800.00000	15.80000		0.69206