Mercurial > repos > bgruening > hicexplorer_chicsignificantinteractions
view test-data/cHi-C/chicQualityControl/new_referencepoints.bed_raw_filter @ 8:640e0e45518a draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 07802a6bd441d9da888cfb8283f8c2135704f7c9
author | iuc |
---|---|
date | Wed, 18 Oct 2023 10:52:55 +0000 |
parents | 6001400eed99 |
children | 45a386d18509 |
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# Created with chicQualityControl version 3.7.2 # A sparsity of -1.0 indicates a faulty reference point e.g. no data for this reference point was in the matrix. # Used Matrices 0_matrix.cool 1_matrix.cool # Chromosome Start End Sparsity 0_matrix.cool Sparsity 1_matrix.cool chr1 4487435 4487435 Sox17 0.14485514485514486 0.16083916083916083 chr1 14300280 14300280 Eya1 0.14285714285714285 0.1938061938061938 chr1 19093103 19093103 Tfap2d 0.1048951048951049 0.16683316683316685 chr1 19198995 19198995 Tfap2b 0.01898101898101898 0.016983016983016984 chr1 24202042 24202042 Col9a1 0.10589410589410589 0.12787212787212787 chr1 33776741 33776741 Rab23 0.15484515484515485 0.2137862137862138 chr1 38684089 38684089 Aff3 0.11588411588411589 0.11388611388611389 chr1 42753991 42753991 Pou3f3 0.04995004995004995 0.07592407592407592 chr1 52176282 52176282 Stat1 0.19080919080919082 0.22777222777222778 chr1 52557292 52557292 Nab1 0.02197802197802198 0.024975024975024976 chr1 53118507 53118507 Mstn 0.3116883116883117 0.37462537462537465 chr1 57028178 57028178 Satb2 0.12287712287712288 0.14385614385614387 chr1 59821123 59821123 Bmpr2 0.14085914085914086 0.16983016983016982 chr1 66991630 66991630 Myl1 0.0919080919080919 0.09290709290709291 chr1 74648029 74648029 Stk36 0.2777222777222777 0.3356643356643357 chr1 74818466 74818466 Wnt6 0.29270729270729273 0.34165834165834164 chr1 74838593 74838593 Wnt10a 0.00999000999000999 0.008991008991008992 chr1 74998246 74998246 Ihh 0.008991008991008992 0.003996003996003996 chr1 75356867 75356867 Des 0.18081918081918083 0.21678321678321677 chr1 77511663 77511663 Epha4 0.15684315684315683 0.22277722277722278 chr1 78193711 78193711 Pax3 0.24375624375624375 0.3096903096903097 chr1 89102386 89102386 Chrng 0.16783216783216784 0.2217782217782218 chr1 93355905 93355905 Per2 0.15384615384615385 0.16483516483516483 chr1 93698054 93698054 Twist2 0.22277722277722278 0.23476523476523475 chr1 94076918 94076918 Hdac4 0.0 0.0 chr1 107677300 107677300 Tnfrsf11a 0.14685314685314685 0.16383616383616384 chr1 120950196 120950196 Gli2 0.13986013986013987 0.2007992007992008 chr1 122499064 122499064 En1 0.1008991008991009 0.11988011988011989 chr1 127808791 127808791 Lypd1 0.18681318681318682 0.22977022977022976 chr1 135934092 135934092 Fmod 0.3516483516483517 0.4145854145854146 chr1 136186581 136186581 MyoG 0.07392607392607392 0.09090909090909091 chr1 152313295 152313295 Prg4 0.00999000999000999 0.006993006993006993 chr1 164004278 164006270 mm712 0.26173826173826176 0.2867132867132867 chr1 164147754 164147754 Dnm3os 0.24875124875124874 0.24675324675324675 chr1 165243781 165243781 Prrx1 0.36063936063936064 0.34065934065934067 chr1 165333772 165333772 Gorab 0.36863136863136864 0.3956043956043956 chr1 169619689 169619689 Lmx1a 0.11888111888111888 0.16783216783216784 chr1 170362300 170362300 Pbx1 0.003996003996003996 0.002997002997002997 chr1 180249284 180249284 Gm16586 0.0 0.0 chr1 182823250 182823250 Lefty2 0.27472527472527475 0.33266733266733267 chr1 182865170 182865170 Lefty1 0.25674325674325676 0.3086913086913087 chr1 188529871 188529871 Tgfb2 0.13486513486513488 0.16583416583416583 chr1 194979306 194979306 Irf6 0.12987012987012986 0.15284715284715283