Mercurial > repos > bgruening > hicexplorer_hicaggregatecontacts

comparison test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed @ 6:f922a8d5e897 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author bgruening
date Wed, 05 Feb 2020 19:45:52 -0500
parents ce16a538ab46
children
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5:ce16a538ab46 6:f922a8d5e897
1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
2 # This file contains the p-values computed by fisher test 2 # This file contains the p-values computed by fisher test
3 # To test the smoothed (float) values they were rounded up to the next integer 3 # To test the smoothed (float) values they were rounded up to the next integer
4 # 4 #
5 # Alpha level 0.5 5 # Alpha level 0.5
6 # Degrees of freedom 1 6 # Degrees of freedom 1
7 # 7 #
8 # FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
9 # MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
11 chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00366 11 chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.23380
12 chr1 14285000 14308000 Eya1 7000 673.00000 389.40000 832.00000 479.80000 0.96586
13 chr1 14310000 14322000 Eya1 21000 673.00000 54.80000 832.00000 52.80000 0.23002
14 chr1 14361000 14407000 Eya1 106000 673.00000 21.20000 832.00000 36.00000 0.34706
15 chr1 14426000 14432000 Eya1 131000 673.00000 2.40000 832.00000 9.00000 0.24523
16 chr1 14447000 14455000 Eya1 154000 673.00000 4.40000 832.00000 12.40000 0.23210
17 chr1 14460000 14465000 Eya1 164000 673.00000 3.20000 832.00000 7.60000 0.56425
18 chr1 14491000 14500000 Eya1 199000 673.00000 17.65000 832.00000 15.75000 0.38515