Mercurial > repos > bgruening > hicexplorer_hicaggregatecontacts
diff test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.bed @ 6:f922a8d5e897 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author | bgruening |
---|---|
date | Wed, 05 Feb 2020 19:45:52 -0500 |
parents | ce16a538ab46 |
children |
line wrap: on
line diff
--- a/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.bed Mon Dec 16 15:27:02 2019 -0500 +++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.bed Wed Feb 05 19:45:52 2020 -0500 @@ -1,16 +1,13 @@ -# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.2-dev +# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 # This file contains the p-values computed by fisher test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # -# FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 -# MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 +# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 +# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value -chr1 4472000 4503000 Sox17 15000 810.00000 566.20000 978.00000 724.40000 0.44082 -chr1 4507000 4516000 Sox17 28000 810.00000 38.80000 978.00000 19.00000 0.00117 -chr1 4520000 4531000 Sox17 43000 810.00000 10.40000 978.00000 22.20000 0.16402 -chr1 4533000 4543000 Sox17 55000 810.00000 6.80000 978.00000 12.20000 0.37847 -chr1 4562000 4593000 Sox17 105000 810.00000 25.00000 978.00000 23.20000 0.46860 -chr1 4664000 4669000 Sox17 181000 810.00000 1.20000 978.00000 5.40000 0.30594 +chr1 4512000 4529000 Sox17 41000 810.00000 24.80000 978.00000 33.20000 0.69177 +chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.37830 +chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.12513