Mercurial > repos > bgruening > hicexplorer_hicaggregatecontacts
view test-data/cHi-C/chicQualityControl/new_referencepoints.bed_report @ 15:63c8377c58b3 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 79133bc3739fbcc6c2055d589679aae312161d03
author | iuc |
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date | Tue, 05 Nov 2024 00:10:46 +0000 |
parents | b05f662f9f35 |
children | 30677e95bc89 |
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# Created with chicQualityControl version 3.7.5 # QC report for matrices: 0_matrix.cool 1_matrix.cool #Sparsity threshold for rejection: sparsity <= 0.05 are rejected. Number of reference points: 43 Number of accepted reference points: 35 Number of rejected reference points: 8 Number of faulty reference points: 0 A faulty reference point is caused by the non-presence of the chromosome in one of the given matrices. It can also be caused by the non-presence of valid Hi-C reads in a region, especially at the chromosome ends. Please check the results of hicInfo to validate this for your data.