view test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.bed @ 5:ce16a538ab46 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
author bgruening
date Mon, 16 Dec 2019 15:27:02 -0500
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children f922a8d5e897
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.2-dev
# This file contains the p-values computed by fisher test
# To test the smoothed (float) values they were rounded up to the next integer
#
# Alpha level 0.5
# Degrees of freedom 1
#
# FL-E13-5_chr1.cool	chr1_19093103_19093103	18.89  Mbp	19.29  Mbp	Tfap2d	Sum of interactions in fixate range: 472.0
# MB-E10-5_chr1.cool	chr1_19093103_19093103	18.89  Mbp	19.29  Mbp	Tfap2d	Sum of interactions in fixate range: 800.0
#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
chr1	19077000	19114000	Tfap2d	20000	472.00000	344.80000	800.00000	527.80000		0.27744
chr1	19125000	19129000	Tfap2d	35000	472.00000	7.80000	800.00000	8.80000		0.45206
chr1	19134000	19139000	Tfap2d	45000	472.00000	8.40000	800.00000	11.20000		0.65094
chr1	19141000	19238000	Tfap2d	144000	472.00000	47.40000	800.00000	163.00000		0.00005