Mercurial > repos > bgruening > hicexplorer_hicaggregatecontacts
view test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.bed @ 5:ce16a538ab46 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
author | bgruening |
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date | Mon, 16 Dec 2019 15:27:02 -0500 |
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children | f922a8d5e897 |
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.2-dev # This file contains the p-values computed by fisher test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # # FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 # MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value chr1 4472000 4503000 Sox17 15000 810.00000 566.20000 978.00000 724.40000 0.44082 chr1 4507000 4516000 Sox17 28000 810.00000 38.80000 978.00000 19.00000 0.00117 chr1 4520000 4531000 Sox17 43000 810.00000 10.40000 978.00000 22.20000 0.16402 chr1 4533000 4543000 Sox17 55000 810.00000 6.80000 978.00000 12.20000 0.37847 chr1 4562000 4593000 Sox17 105000 810.00000 25.00000 978.00000 23.20000 0.46860 chr1 4664000 4669000 Sox17 181000 810.00000 1.20000 978.00000 5.40000 0.30594