Mercurial > repos > bgruening > hicexplorer_hicaggregatecontacts

changeset 12:e30485c5e93b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
author iuc
date Tue, 10 Jan 2023 19:13:28 +0000
parents ee370ade24cd
children f0216498a666
files hicAggregateContacts.xml macros.xml
diffstat 2 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/hicAggregateContacts.xml	Tue Mar 16 15:21:53 2021 +0000
+++ b/hicAggregateContacts.xml	Tue Jan 10 19:13:28 2023 +0000
@@ -182,10 +182,10 @@
         <collection name="matrix_values" type="list" label="${tool.name} on ${on_string}: Matrix values">
             <discover_datasets pattern="matrix_values_(?P&lt;designation&gt;.*)\..*" directory="./" format="tabular" />
         </collection>
-        <collection name="contact_positions" type="list" label="${tool.name} on ${on_string}: Matrix values">
+        <collection name="contact_positions" type="list" label="${tool.name} on ${on_string}: Contact positions">
             <discover_datasets pattern="contact_positions_(?P&lt;designation&gt;.*)\..*" directory="./" format="tabular" />
         </collection>
-        <collection name="heatmap" type="list" label="${tool.name} on ${on_string}: Matrix values">
+        <collection name="heatmap" type="list" label="${tool.name} on ${on_string}: Heatmap">
             <discover_datasets pattern="heatmap_(?P&lt;designation&gt;.*)\..*" directory="./" format="tabular" />
         </collection>
         <data name="matrix_obs_exp_output" from_work_dir="matrix" format="h5" label="${tool.name} MATRIX on ${on_string}">
--- a/macros.xml	Tue Mar 16 15:21:53 2021 +0000
+++ b/macros.xml	Tue Jan 10 19:13:28 2023 +0000
@@ -1,7 +1,7 @@
 <macros>
     <token name="@THREADS@">\${GALAXY_SLOTS:-4}</token>
     <token name="@TOOL_VERSION@">3.6</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@USE_RANGE@">
         #if $use_range.select_use_range == "yes_use_range":
             --range $use_range.range_min:$use_range.range_max
@@ -333,7 +333,7 @@
         <param name="scaleFactor2" type="float" value="1" label="Scale factor for input" help="(--scaleFactors)" />
     </xml>
     <xml name="xMax">
-        <param argument="--xMax" name="xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" />
+        <param argument="--xMax" type="integer" optional="true" value="" label="Max value for the x-axis in counts per bin" />
     </xml>
     <xml name="filterThreshold">
         <param argument="--filterThreshold" name="filterThreshold_low" type="float" value="-1.5" label="Remove bins of low coverage" help="e.g. -1.5; Both Thresholds needs to be set to take effect." />