comparison test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.txt @ 2:4b6a36c18e5e draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 4b602d427e0fc0da5353a4510798349de98e4ae4"
author iuc
date Wed, 11 Mar 2020 17:05:58 -0400
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1:d4aa0255c1eb 2:4b6a36c18e5e
1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
2 # This file contains the p-values computed by fisher test
3 # To test the smoothed (float) values they were rounded up to the next integer
4 #
5 # Alpha level 0.5
6 # Degrees of freedom 1
7 #
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
11 chr1 19122000 19131000 Tfap2d 37000 472.00000 10.20000 800.00000 15.80000 0.69206
12 chr1 19188000 19232000 Tfap2d 138000 472.00000 23.40000 800.00000 115.00000 0.00000