comparison test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt @ 2:4b6a36c18e5e draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 4b602d427e0fc0da5353a4510798349de98e4ae4"
author iuc
date Wed, 11 Mar 2020 17:05:58 -0400
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1:d4aa0255c1eb 2:4b6a36c18e5e
1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
2 # This file contains the p-values computed by fisher test
3 # To test the smoothed (float) values they were rounded up to the next integer
4 #
5 # Alpha level 0.5
6 # Degrees of freedom 1
7 #
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
11 chr1 4512000 4529000 Sox17 41000 810.00000 24.80000 978.00000 33.20000 0.69177
12 chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.37830
13 chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.12513