Mercurial > repos > bgruening > hicexplorer_hicbuildmatrix
diff test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed @ 14:76b189fd277b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author | bgruening |
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date | Wed, 05 Feb 2020 19:58:45 -0500 |
parents | 4b85ea34afae |
children |
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--- a/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed Mon Dec 16 15:44:31 2019 -0500 +++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed Wed Feb 05 19:58:45 2020 -0500 @@ -1,18 +1,11 @@ -# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3 +# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 # This file contains the p-values computed by chi2 test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # -# FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 -# MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 +# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 +# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value -chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335 -chr1 14285000 14308000 Eya1 7000 673.00000 389.40000 832.00000 479.80000 0.96904 -chr1 14310000 14322000 Eya1 21000 673.00000 54.80000 832.00000 52.80000 0.21097 -chr1 14361000 14407000 Eya1 106000 673.00000 21.20000 832.00000 36.00000 0.25281 -chr1 14426000 14432000 Eya1 131000 673.00000 2.40000 832.00000 9.00000 0.10924 -chr1 14447000 14455000 Eya1 154000 673.00000 4.40000 832.00000 12.40000 0.12863 -chr1 14460000 14465000 Eya1 164000 673.00000 3.20000 832.00000 7.60000 0.32025 -chr1 14491000 14500000 Eya1 199000 673.00000 17.65000 832.00000 15.75000 0.35033 +chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.17177