Mercurial > repos > bgruening > hicexplorer_hicbuildmatrixmicroc

annotate test-data/hicDifferentialTAD/accepted.txt @ 0:0c22e9361298 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 63179f3d35e5dec09cdd01c07c6a4e8af3da777d
author bgruening
date Thu, 05 Dec 2024 21:42:17 +0000
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0c22e9361298 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 63179f3d35e5dec09cdd01c07c6a4e8af3da777d
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1 # Created with HiCExplorer's hicDifferentialTAD version 3.7.6
0c22e9361298 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 63179f3d35e5dec09cdd01c07c6a4e8af3da777d
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2 # H0 'regions are equal' H0 is accepted for all p-value greater the user given p-value threshold; i.e. regions in this file are not considered as differential.
0c22e9361298 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 63179f3d35e5dec09cdd01c07c6a4e8af3da777d
bgruening
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3 # Accepted regions with Wilcoxon rank-sum test to p-value: 1.0 with used mode: all and modeReject: one
0c22e9361298 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 63179f3d35e5dec09cdd01c07c6a4e8af3da777d
bgruening
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4 # Chromosome start end name score strand p-value left-inter-TAD p-value right-inter-TAD p-value intra-TAD W left-inter-TAD W right-inter-TAD W intra-TAD