# HG changeset patch
# User bgruening
# Date 1733434937 0
# Node ID 0c22e9361298aa26faf8005ac9e75db973ce8dcd
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 63179f3d35e5dec09cdd01c07c6a4e8af3da777d
diff -r 000000000000 -r 0c22e9361298 hicBuildMatrixMicroC.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/hicBuildMatrixMicroC.xml Thu Dec 05 21:42:17 2024 +0000
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+
+ create a contact matrix
+
+ hicBuildMatrixMicroC
+ macros.xml
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+ outBam
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diff -r 000000000000 -r 0c22e9361298 macros.xml
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml Thu Dec 05 21:42:17 2024 +0000
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+
+ \${GALAXY_SLOTS:-4}
+ 3.7.6
+ 1
+ 23.0
+
+ #if $use_range.select_use_range == "yes_use_range":
+ --range $use_range.range_min:$use_range.range_max
+ #end if
+
+
+
+
+ hicexplorer
+
+
+ @BINARY@ --version
+
+
+
+ #if $chromosome_list:
+ #set $chromosomes = []
+ #for $chrom in $chromosome_list:
+ #silent $chromosomes.append("'%s'" % $chrom.chromosomes)
+ #end for
+ #set $chromosome_string = ' '.join($chromosomes)
+ --chromosomes $chromosome_string
+ #end if
+
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+ 10.1093/nar/gkaa220
+ 10.1093/nar/gky504
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+ ^(?:[ATCGatcg]+(?:\s[ATCGatcg]+)*)?$
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+ ^(?:[ATCGatcg]+(?:\s[ATCGatcg]+)*)?$
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+ #set $matrices = []
+ #set $mlabels = []
+ #for $counter, $i in enumerate($input_files):
+ ln -s '$i.matrix' '${counter}_matrix.$i.matrix.ext';
+ #silent $matrices.append( '\'%s_matrix.%s\'' % ($counter, $i.matrix.ext))
+
+ #if str($i.mlabel.value) != "":
+ #set $mlabels += ['\'%s\'' % ($i.mlabel.value)]
+ #else
+ #set $mlabels += ['\'%s\'' % ($i.matrix.name)]
+ #end if
+ #end for
+ #set $mlabels = ' '.join($mlabels)
+ #set $matrices = ' '.join($matrices)
+
+
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+
+ not value or value.replace(':', '').replace('-', '').isalnum()
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+ #if $advancedOpt.used_multiple_regions.used_multiple_regions_options == 'no':
+ #if $advancedOpt.used_multiple_regions.clustering.clustering_options == 'kmeans':
+ #if int($advancedOpt.used_multiple_regions.clustering.k_kmeans) > 0:
+ --kmeans $advancedOpt.used_multiple_regions.clustering.k_kmeans
+ #end if
+ #end if
+ #end if
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+ value.replace(' ', '').isnumeric()
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+ value.replace(' ', '').isnumeric()
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+ value.replace(' ', '').isnumeric()
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+
+.. class:: infomark
+
+For more information on the tools, please visit our `help site`_.
+
+If you would like to give us feedback or you run into any trouble, please send an email to deeptools@googlegroups.com
+
+This tool is developed by the `Bioinformatics and Deep-Sequencing Unit`_ at the `Max Planck Institute for Immunobiology and Epigenetics`_.
+
+.. _Bioinformatics and Deep-Sequencing Unit: http://www3.ie-freiburg.mpg.de/facilities/research-facilities/bioinformatics-and-deep-sequencing-unit/
+.. _Max Planck Institute for Immunobiology and Epigenetics: http://www3.ie-freiburg.mpg.de
+.. _help site: https://hicexplorer.readthedocs.org
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+ value.isalnum()
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+ value.isalnum()
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+
+ #import tempfile
+ #set $temp_dir = os.path.abspath(tempfile.mkdtemp())
+ #set files=[]
+ #set labels=[]
+ #for $i in $input_files:
+ #set $temp_input_handle = tempfile.NamedTemporaryFile( dir=$temp_dir )
+ #set $temp_input_path = $temp_input_handle.name
+ #silent $temp_input_handle.close()
+ #silent os.system("ln -s %s %s.bam" % (str($i.bamfile), $temp_input_path))
+ #silent os.system("ln -s %s %s.bam.bai" % (str($i.bamfile.metadata.bam_index), $temp_input_path))
+ #silent $files.append('%s.bam' % $temp_input_path)
+
+ ##set $files += [str($i.bamfile)]
+ #if str($i.label.value) != "":
+ #set $labels += ["\"%s\"" % ($i.label.value)]
+ #else
+ #set $labels += ["\"%s\"" % ($i.bamfile.name)]
+ #end if
+ #end for
+
+
+
+ #import tempfile
+ #set $temp_dir = os.path.abspath(tempfile.mkdtemp())
+ #set files=[]
+ #set labels=[]
+ #for $i in $input_files:
+ #set $temp_input_handle = tempfile.NamedTemporaryFile( dir=$temp_dir )
+ #set $temp_input_path = $temp_input_handle.name
+ #silent $temp_input_handle.close()
+ #silent os.system("ln -s %s %s.bw" % (str($i.bigwigfile), $temp_input_path))
+ #silent $files.append('%s.bw' % $temp_input_path)
+
+ ##set $files += [str($i.bigwigfile)]
+ #if str($i.label.value) != "":
+ #set $labels += ["\"%s\"" % ($i.label.value)]
+ #else
+ #set $labels += ["\"%s\"" % ($i.bigwigfile.name)]
+ #end if
+ #end for
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+ #if $source.ref_source=="history":
+ --genome $source.input1
+ #else:
+ --genome "${source.input1_2bit.fields.path}"
+ #end if
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+ ((
+ output['showOutputSettings'] == 'yes' and
+ output['saveMatrix'] is True
+ ))
+
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+ ((
+ output['showOutputSettings'] == 'yes' and
+ output['saveData'] is True
+ ))
+
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+ ((
+ output['showOutputSettings'] == 'yes' and
+ output['saveSortedRegions'] is True
+ ))
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+ value.isalnum()
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diff -r 000000000000 -r 0c22e9361298 static/images/SRR027956.svg
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/static/images/SRR027956.svg Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,678 @@
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diff -r 000000000000 -r 0c22e9361298 static/images/SRR0279XX_perChr_eigenvector1.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicAggregateContacts.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicCompareMatrices_QC_log2_m50_matrix_plot.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicCompareMatrices_m1bp_over_gst_log2_m50_matrix_plot.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicCorrelate_spearman.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicDetectLoops.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicPCA.png
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diff -r 000000000000 -r 0c22e9361298 static/images/hicQC_unmappable_and_non_unique.png
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diff -r 000000000000 -r 0c22e9361298 static/images/z-score.svg
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/static/images/z-score.svg Thu Dec 05 21:42:17 2024 +0000
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+
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/DpnII_10k.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/DpnII_10k.bed Thu Dec 05 21:42:17 2024 +0000
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+chr2L 79 83 . 0 +
+chr2L 228 232 . 0 +
+chr2L 369 373 . 0 +
+chr2L 537 541 . 0 +
+chr2L 686 690 . 0 +
+chr2L 827 831 . 0 +
+chr2L 995 999 . 0 +
+chr2L 1144 1148 . 0 +
+chr2L 1285 1289 . 0 +
+chr2L 1453 1457 . 0 +
+chr2L 1602 1606 . 0 +
+chr2L 1743 1747 . 0 +
+chr2L 1911 1915 . 0 +
+chr2L 2060 2064 . 0 +
+chr2L 2201 2205 . 0 +
+chr2L 2369 2373 . 0 +
+chr2L 2518 2522 . 0 +
+chr2L 2659 2663 . 0 +
+chr2L 2827 2831 . 0 +
+chr2L 2976 2980 . 0 +
+chr2L 3117 3121 . 0 +
+chr2L 3285 3289 . 0 +
+chr2L 3434 3438 . 0 +
+chr2L 3575 3579 . 0 +
+chr2L 3743 3747 . 0 +
+chr2L 3892 3896 . 0 +
+chr2L 4033 4037 . 0 +
+chr2L 4201 4205 . 0 +
+chr2L 4350 4354 . 0 +
+chr2L 4491 4495 . 0 +
+chr2L 4659 4663 . 0 +
+chr2L 4808 4812 . 0 +
+chr2L 4949 4953 . 0 +
+chr2L 5117 5121 . 0 +
+chr2L 5151 5155 . 0 +
+chr2L 5300 5304 . 0 +
+chr2L 6022 6026 . 0 +
+chr2L 6878 6882 . 0 +
+chr2L 6920 6924 . 0 +
+chr2L 7691 7695 . 0 +
+chr2L 7714 7718 . 0 +
+chr2L 8550 8554 . 0 +
+chr2L 8794 8798 . 0 +
+chr2L 9692 9696 . 0 +
+chr2L 9745 9749 . 0 +
+chr2L 9800 9804 . 0 +
+chr2L 12439 12443 . 0 +
+chr2L 12691 12695 . 0 +
+chr2L 12712 12716 . 0 +
+chr2L 13064 13068 . 0 +
+chr2L 13291 13295 . 0 +
+chr2L 13321 13325 . 0 +
+chr2L 13563 13567 . 0 +
+chr2L 13719 13723 . 0 +
+chr2L 13807 13811 . 0 +
+chr2L 14019 14023 . 0 +
+chr2L 14035 14039 . 0 +
+chr2L 14065 14069 . 0 +
+chr2L 14230 14234 . 0 +
+chr2L 14665 14669 . 0 +
+chr2L 14818 14822 . 0 +
+chr2L 14871 14875 . 0 +
+chr2L 14972 14976 . 0 +
+chr2L 15073 15077 . 0 +
+chr2L 15371 15375 . 0 +
+chr2L 15662 15666 . 0 +
+chr2L 15837 15841 . 0 +
+chr2L 16091 16095 . 0 +
+chr2L 16173 16177 . 0 +
+chr2L 16954 16958 . 0 +
+chr2L 17447 17451 . 0 +
+chr2L 17583 17587 . 0 +
+chr2L 18026 18030 . 0 +
+chr2L 18551 18555 . 0 +
+chr2L 18815 18819 . 0 +
+chr2L 19786 19790 . 0 +
+chr2L 20256 20260 . 0 +
+chr2L 20388 20392 . 0 +
+chr2L 20831 20835 . 0 +
+chr2L 21356 21360 . 0 +
+chr2L 21641 21645 . 0 +
+chr2L 22094 22098 . 0 +
+chr2L 22350 22354 . 0 +
+chr2L 22504 22508 . 0 +
+chr2L 22669 22673 . 0 +
+chr2L 22730 22734 . 0 +
+chr2L 22734 22738 . 0 +
+chr2L 23026 23030 . 0 +
+chr2L 24357 24361 . 0 +
+chr2L 25083 25087 . 0 +
+chr2L 26560 26564 . 0 +
+chr2L 26684 26688 . 0 +
+chr2L 27423 27427 . 0 +
+chr2L 27495 27499 . 0 +
+chr2L 28150 28154 . 0 +
+chr2L 28208 28212 . 0 +
+chr2L 28346 28350 . 0 +
+chr2L 28561 28565 . 0 +
+chr2L 28705 28709 . 0 +
+chr2L 29021 29025 . 0 +
+chr2L 29720 29724 . 0 +
+chr2L 29912 29916 . 0 +
+chr2L 30346 30350 . 0 +
+chr2L 31057 31061 . 0 +
+chr2L 31074 31078 . 0 +
+chr2L 31399 31403 . 0 +
+chr2L 31487 31491 . 0 +
+chr2L 31531 31535 . 0 +
+chr2L 32017 32021 . 0 +
+chr2L 32453 32457 . 0 +
+chr2L 32487 32491 . 0 +
+chr2L 32833 32837 . 0 +
+chr2L 33597 33601 . 0 +
+chr2L 33755 33759 . 0 +
+chr2L 33988 33992 . 0 +
+chr2L 34487 34491 . 0 +
+chr2L 34579 34583 . 0 +
+chr2L 36694 36698 . 0 +
+chr2L 36710 36714 . 0 +
+chr2L 37054 37058 . 0 +
+chr2L 38499 38503 . 0 +
+chr2L 38558 38562 . 0 +
+chr2L 38619 38623 . 0 +
+chr2L 39245 39249 . 0 +
+chr2L 39324 39328 . 0 +
+chr2L 40179 40183 . 0 +
+chr2L 40563 40567 . 0 +
+chr2L 40786 40790 . 0 +
+chr2L 41461 41465 . 0 +
+chr2L 41888 41892 . 0 +
+chr2L 42002 42006 . 0 +
+chr2L 43327 43331 . 0 +
+chr2L 43420 43424 . 0 +
+chr2L 44351 44355 . 0 +
+chr2L 44544 44548 . 0 +
+chr2L 45260 45264 . 0 +
+chr2L 47323 47327 . 0 +
+chr2L 47590 47594 . 0 +
+chr2L 47613 47617 . 0 +
+chr2L 48097 48101 . 0 +
+chr2L 48239 48243 . 0 +
+chr2L 48539 48543 . 0 +
+chr2L 48791 48795 . 0 +
+chr2L 49070 49074 . 0 +
+chr2L 49160 49164 . 0 +
+chr2L 49642 49646 . 0 +
+chr2L 50006 50010 . 0 +
+chr2L 50518 50522 . 0 +
+chr2L 50535 50539 . 0 +
+chr2L 50932 50936 . 0 +
+chr2L 50968 50972 . 0 +
+chr2L 51060 51064 . 0 +
+chr2L 51150 51154 . 0 +
+chr2L 51786 51790 . 0 +
+chr2L 52032 52036 . 0 +
+chr2L 52038 52042 . 0 +
+chr2L 52461 52465 . 0 +
+chr2L 52497 52501 . 0 +
+chr2L 53141 53145 . 0 +
+chr2L 53244 53248 . 0 +
+chr2L 53319 53323 . 0 +
+chr2L 53396 53400 . 0 +
+chr2L 53944 53948 . 0 +
+chr2L 54049 54053 . 0 +
+chr2L 55592 55596 . 0 +
+chr2L 55633 55637 . 0 +
+chr2L 56325 56329 . 0 +
+chr2L 56929 56933 . 0 +
+chr2L 57479 57483 . 0 +
+chr2L 57889 57893 . 0 +
+chr2L 58750 58754 . 0 +
+chr2L 58762 58766 . 0 +
+chr2L 59730 59734 . 0 +
+chr2L 59818 59822 . 0 +
+chr2L 60340 60344 . 0 +
+chr2L 62772 62776 . 0 +
+chr2L 63125 63129 . 0 +
+chr2L 63345 63349 . 0 +
+chr2L 63666 63670 . 0 +
+chr2L 64480 64484 . 0 +
+chr2L 64662 64666 . 0 +
+chr2L 64703 64707 . 0 +
+chr2L 64716 64720 . 0 +
+chr2L 65315 65319 . 0 +
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\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/Li_et_al_2015.cool
Binary file test-data/Li_et_al_2015.cool has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/FL-E13-5_chr1.cool
Binary file test-data/cHi-C/FL-E13-5_chr1.cool has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/MB-E10-5_chr1.cool
Binary file test-data/cHi-C/MB-E10-5_chr1.cool has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate.tar.gz
Binary file test-data/cHi-C/aggregate.tar.gz has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_FL-E13-5_chr1_chr1_Eya1_aggregate.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_FL-E13-5_chr1_chr1_Eya1_aggregate.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# Chromosome Start End Gene Sum of interactions Relative position Raw
+chr1 14274000 14278000 Eya1 673.000000000000 -23000 5.600000000000
+chr1 14295000 14298000 Eya1 673.000000000000 -3000 44.400000000000
+chr1 14314000 14319000 Eya1 673.000000000000 18000 24.200000000000
+chr1 14426000 14432000 Eya1 673.000000000000 131000 2.400000000000
+chr1 14447000 14455000 Eya1 673.000000000000 154000 4.400000000000
+chr1 14460000 14465000 Eya1 673.000000000000 164000 3.200000000000
+chr1 14480000 14488000 Eya1 673.000000000000 187000 7.600000000000
+chr1 14491000 14501000 Eya1 673.000000000000 200000 20.650000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_FL-E13-5_chr1_chr1_Sox17_aggregate.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_FL-E13-5_chr1_chr1_Sox17_aggregate.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# Chromosome Start End Gene Sum of interactions Relative position Raw
+chr1 4481000 4488000 Sox17 810.000000000000 0 297.800000000000
+chr1 4499000 4502000 Sox17 810.000000000000 14000 20.400000000000
+chr1 4509000 4515000 Sox17 810.000000000000 27000 27.800000000000
+chr1 4561000 4567000 Sox17 810.000000000000 79000 11.600000000000
+chr1 4585000 4590000 Sox17 810.000000000000 102000 8.000000000000
+chr1 4652000 4658000 Sox17 810.000000000000 170000 6.000000000000
+chr1 4664000 4669000 Sox17 810.000000000000 181000 1.200000000000
+chr1 4674000 4679000 Sox17 810.000000000000 191000 1.600000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_FL-E13-5_chr1_chr1_Tfap2d_aggregate.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_FL-E13-5_chr1_chr1_Tfap2d_aggregate.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Chromosome Start End Gene Sum of interactions Relative position Raw
+chr1 19078000 19081000 Tfap2d 472.000000000000 -13000 0.000000000000
+chr1 19086000 19091000 Tfap2d 472.000000000000 -3000 32.800000000000
+chr1 19104000 19106000 Tfap2d 472.000000000000 12000 10.600000000000
+chr1 19109000 19114000 Tfap2d 472.000000000000 20000 18.600000000000
+chr1 19125000 19129000 Tfap2d 472.000000000000 35000 7.800000000000
+chr1 19133000 19139000 Tfap2d 472.000000000000 45000 10.000000000000
+chr1 19182000 19185000 Tfap2d 472.000000000000 91000 1.000000000000
+chr1 19189000 19238000 Tfap2d 472.000000000000 144000 25.800000000000
+chr1 19254000 19261000 Tfap2d 472.000000000000 167000 6.400000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_MB-E10-5_chr1_chr1_Eya1_aggregate.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_MB-E10-5_chr1_chr1_Eya1_aggregate.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# Chromosome Start End Gene Sum of interactions Relative position Raw
+chr1 14274000 14278000 Eya1 832.000000000000 -23000 0.000000000000
+chr1 14295000 14298000 Eya1 832.000000000000 -3000 49.800000000000
+chr1 14314000 14319000 Eya1 832.000000000000 18000 23.400000000000
+chr1 14426000 14432000 Eya1 832.000000000000 131000 9.000000000000
+chr1 14447000 14455000 Eya1 832.000000000000 154000 12.400000000000
+chr1 14460000 14465000 Eya1 832.000000000000 164000 7.600000000000
+chr1 14480000 14488000 Eya1 832.000000000000 187000 3.200000000000
+chr1 14491000 14501000 Eya1 832.000000000000 200000 18.750000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_MB-E10-5_chr1_chr1_Sox17_aggregate.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_MB-E10-5_chr1_chr1_Sox17_aggregate.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# Chromosome Start End Gene Sum of interactions Relative position Raw
+chr1 4481000 4488000 Sox17 978.000000000000 0 400.400000000000
+chr1 4499000 4502000 Sox17 978.000000000000 14000 21.000000000000
+chr1 4509000 4515000 Sox17 978.000000000000 27000 13.200000000000
+chr1 4561000 4567000 Sox17 978.000000000000 79000 12.400000000000
+chr1 4585000 4590000 Sox17 978.000000000000 102000 2.400000000000
+chr1 4652000 4658000 Sox17 978.000000000000 170000 5.000000000000
+chr1 4664000 4669000 Sox17 978.000000000000 181000 5.400000000000
+chr1 4674000 4679000 Sox17 978.000000000000 191000 5.200000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_MB-E10-5_chr1_chr1_Tfap2d_aggregate.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/aggregate/FL-E13-5_chr1_MB-E10-5_chr1_MB-E10-5_chr1_chr1_Tfap2d_aggregate.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Chromosome Start End Gene Sum of interactions Relative position Raw
+chr1 19078000 19081000 Tfap2d 800.000000000000 -13000 9.000000000000
+chr1 19086000 19091000 Tfap2d 800.000000000000 -3000 88.600000000000
+chr1 19104000 19106000 Tfap2d 800.000000000000 12000 14.800000000000
+chr1 19109000 19114000 Tfap2d 800.000000000000 20000 22.200000000000
+chr1 19125000 19129000 Tfap2d 800.000000000000 35000 8.800000000000
+chr1 19133000 19139000 Tfap2d 800.000000000000 45000 12.800000000000
+chr1 19182000 19185000 Tfap2d 800.000000000000 91000 5.000000000000
+chr1 19189000 19238000 Tfap2d 800.000000000000 144000 126.600000000000
+chr1 19254000 19261000 Tfap2d 800.000000000000 167000 1.400000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/background.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/background.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1002 @@
+Relative position size nbinom prob nbinom max value mean value
+-500000 137.858473011804 0.995405146787 1.333333333333 0.000543195980
+-499000 147.229076328303 0.996053553980 1.500000000000 0.000497929648
+-498000 157.681167397960 0.997075439230 1.200000000000 0.000394787078
+-497000 162.845011818209 0.997421060405 1.000000000000 0.000359407866
+-496000 131.489161266395 0.997174285891 0.800000000000 0.000318157645
+-495000 139.387908705363 0.997380157213 0.800000000000 0.000311747258
+-494000 127.546293271132 0.997238202254 1.000000000000 0.000305871070
+-493000 138.234947009504 0.997287467570 1.000000000000 0.000319169812
+-492000 118.867084591776 0.996746150847 1.200000000000 0.000333308009
+-491000 136.692711366757 0.997596976644 1.000000000000 0.000279357932
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/aggregate.hdf5
Binary file test-data/cHi-C/chicAggregateStatistic/aggregate.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode.tar
Binary file test-data/cHi-C/chicAggregateStatistic/batch_mode.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 14274000 14279000 Eya1 673.0 -22000 7.00000
+chr1 14290000 14439000 Eya1 673.0 138000 523.00000
+chr1 14444000 14467000 Eya1 673.0 166000 10.00000
+chr1 14476000 14501000 Eya1 673.0 200000 30.25000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,5 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 19077000 19118000 Tfap2d 472.0 24000 349.00000
+chr1 19120000 19274000 Tfap2d 472.0 180000 86.00000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,5 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 4480000 4549000 Sox17 810.0 61000 640.00000
+chr1 4555000 4688000 Sox17 810.0 200000 73.18333
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 14274000 14279000 Eya1 832.0 -22000 0.00000
+chr1 14290000 14439000 Eya1 832.0 138000 645.00000
+chr1 14444000 14467000 Eya1 832.0 166000 25.00000
+chr1 14476000 14501000 Eya1 832.0 200000 26.15000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,5 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 19077000 19118000 Tfap2d 800.0 24000 534.00000
+chr1 19120000 19274000 Tfap2d 800.0 180000 214.00000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode/MB-E10-5_chr1_chr1_4487435_4487435_Sox17_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode/MB-E10-5_chr1_chr1_4487435_4487435_Sox17_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,5 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 4480000 4549000 Sox17 978.0 61000 798.00000
+chr1 4555000 4688000 Sox17 978.0 200000 82.93333
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/batch_mode_file_names.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/batch_mode_file_names.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,6 @@
+FL-E13-5_chr1_chr1_4487435_4487435_Sox17_aggregated.txt
+MB-E10-5_chr1_chr1_4487435_4487435_Sox17_aggregated.txt
+FL-E13-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt
+MB-E10-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt
+FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_aggregated.txt
+MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_aggregated.txt
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/regular_mode/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/regular_mode/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 14274000 14279000 Eya1 673.0 -22000 7.00000
+chr1 14290000 14439000 Eya1 673.0 138000 523.00000
+chr1 14444000 14467000 Eya1 673.0 166000 10.00000
+chr1 14476000 14501000 Eya1 673.0 200000 30.25000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicAggregateStatistic/regular_mode/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicAggregateStatistic/regular_mode/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_aggregated.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# Aggregated file, created with HiCExplorer's chicAggregateStatistic version 3.4.3
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Sum of interactions Relative distance Raw target
+chr1 14274000 14279000 Eya1 832.0 -22000 0.00000
+chr1 14290000 14439000 Eya1 832.0 138000 645.00000
+chr1 14444000 14467000 Eya1 832.0 166000 25.00000
+chr1 14476000 14501000 Eya1 832.0 200000 26.15000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2.tar
Binary file test-data/cHi-C/chicDifferentialTest/batch_mode_chi2.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 0.97540
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,13 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335
+chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.05733
+chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.18635
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,14 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335
+chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 0.97540
+chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.05733
+chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.18635
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,12 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 19077000 19118000 Tfap2d 24000 472.00000 349.00000 800.00000 534.00000 0.25577
+chr1 19120000 19274000 Tfap2d 180000 472.00000 86.00000 800.00000 214.00000 0.00599
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,12 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 19077000 19118000 Tfap2d 24000 472.00000 349.00000 800.00000 534.00000 0.25577
+chr1 19120000 19274000 Tfap2d 180000 472.00000 86.00000 800.00000 214.00000 0.00599
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,12 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 4480000 4549000 Sox17 61000 810.00000 640.00000 978.00000 798.00000 0.65155
+chr1 4555000 4688000 Sox17 200000 810.00000 73.18333 978.00000 82.93333 0.70460
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,12 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by chi2 test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 4480000 4549000 Sox17 61000 810.00000 640.00000 978.00000 798.00000 0.65155
+chr1 4555000 4688000 Sox17 200000 810.00000 73.18333 978.00000 82.93333 0.70460
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile.tar
Binary file test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.23380
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.23380
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 19122000 19131000 Tfap2d 37000 472.00000 10.20000 800.00000 15.80000 0.69206
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 19188000 19232000 Tfap2d 138000 472.00000 23.40000 800.00000 115.00000 0.00000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,12 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 19122000 19131000 Tfap2d 37000 472.00000 10.20000 800.00000 15.80000 0.69206
+chr1 19188000 19232000 Tfap2d 138000 472.00000 23.40000 800.00000 115.00000 0.00000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 4512000 4529000 Sox17 41000 810.00000 24.80000 978.00000 33.20000 0.69177
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,12 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.37830
+chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.12513
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,13 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 4512000 4529000 Sox17 41000 810.00000 24.80000 978.00000 33.20000 0.69177
+chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.37830
+chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.12513
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/differential.hdf5
Binary file test-data/cHi-C/chicDifferentialTest/differential.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 1.00000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,13 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00366
+chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.06013
+chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.22603
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,14 @@
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
+chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00366
+chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 1.00000
+chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.06013
+chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.22603
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicDifferentialTest/rejectedFilesList.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/rejectedFilesList.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt
+FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.txt
+FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.txt
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/aggregate.tar.gz
Binary file test-data/cHi-C/chicExportData/aggregate.tar.gz has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/oneGene/FL-E13-5_chr1_genes_Eya1.bigwig
Binary file test-data/cHi-C/chicExportData/oneGene/FL-E13-5_chr1_genes_Eya1.bigwig has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/oneGene/FL-E13-5_chr1_genes_Eya1_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicExportData/oneGene/FL-E13-5_chr1_genes_Eya1_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,402 @@
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+chr1 14100000 14101000 Eya1 673.000000000000 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14101000 14102000 Eya1 673.000000000000 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14102000 14103000 Eya1 673.000000000000 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14103000 14104000 Eya1 673.000000000000 -197000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14104000 14105000 Eya1 673.000000000000 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14105000 14106000 Eya1 673.000000000000 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14106000 14107000 Eya1 673.000000000000 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14107000 14108000 Eya1 673.000000000000 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14108000 14109000 Eya1 673.000000000000 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14109000 14110000 Eya1 673.000000000000 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14110000 14111000 Eya1 673.000000000000 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14111000 14112000 Eya1 673.000000000000 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14112000 14113000 Eya1 673.000000000000 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14113000 14114000 Eya1 673.000000000000 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14114000 14115000 Eya1 673.000000000000 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14115000 14116000 Eya1 673.000000000000 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14116000 14117000 Eya1 673.000000000000 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14117000 14118000 Eya1 673.000000000000 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14118000 14119000 Eya1 673.000000000000 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14119000 14120000 Eya1 673.000000000000 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14120000 14121000 Eya1 673.000000000000 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14121000 14122000 Eya1 673.000000000000 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14122000 14123000 Eya1 673.000000000000 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14123000 14124000 Eya1 673.000000000000 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14124000 14125000 Eya1 673.000000000000 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14125000 14126000 Eya1 673.000000000000 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14126000 14127000 Eya1 673.000000000000 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14127000 14128000 Eya1 673.000000000000 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14128000 14129000 Eya1 673.000000000000 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14129000 14130000 Eya1 673.000000000000 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14130000 14131000 Eya1 673.000000000000 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14131000 14132000 Eya1 673.000000000000 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14132000 14133000 Eya1 673.000000000000 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14133000 14134000 Eya1 673.000000000000 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14134000 14135000 Eya1 673.000000000000 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14135000 14136000 Eya1 673.000000000000 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14136000 14137000 Eya1 673.000000000000 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14137000 14138000 Eya1 673.000000000000 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14138000 14139000 Eya1 673.000000000000 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14139000 14140000 Eya1 673.000000000000 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14140000 14141000 Eya1 673.000000000000 -160000 0.000891530461 0.012107544045 4.242405017910 0.600000000000
+chr1 14141000 14142000 Eya1 673.000000000000 -159000 0.000891530461 0.012107544045 4.789812097144 0.600000000000
+chr1 14142000 14143000 Eya1 673.000000000000 -158000 0.000891530461 0.012107544045 4.303889149198 0.600000000000
+chr1 14143000 14144000 Eya1 673.000000000000 -157000 0.000891530461 0.012107544045 4.367181637306 0.600000000000
+chr1 14144000 14145000 Eya1 673.000000000000 -156000 0.000891530461 0.012107544045 5.120143967809 0.600000000000
+chr1 14145000 14146000 Eya1 673.000000000000 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14146000 14147000 Eya1 673.000000000000 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14147000 14148000 Eya1 673.000000000000 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14148000 14149000 Eya1 673.000000000000 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14149000 14150000 Eya1 673.000000000000 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14150000 14151000 Eya1 673.000000000000 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14151000 14152000 Eya1 673.000000000000 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14152000 14153000 Eya1 673.000000000000 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14153000 14154000 Eya1 673.000000000000 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14154000 14155000 Eya1 673.000000000000 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14155000 14156000 Eya1 673.000000000000 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14156000 14157000 Eya1 673.000000000000 -144000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14157000 14158000 Eya1 673.000000000000 -143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14158000 14159000 Eya1 673.000000000000 -142000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14159000 14160000 Eya1 673.000000000000 -141000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14160000 14161000 Eya1 673.000000000000 -140000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14161000 14162000 Eya1 673.000000000000 -139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14162000 14163000 Eya1 673.000000000000 -138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14163000 14164000 Eya1 673.000000000000 -137000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14164000 14165000 Eya1 673.000000000000 -136000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14165000 14166000 Eya1 673.000000000000 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14166000 14167000 Eya1 673.000000000000 -134000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14167000 14168000 Eya1 673.000000000000 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14168000 14169000 Eya1 673.000000000000 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14169000 14170000 Eya1 673.000000000000 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14170000 14171000 Eya1 673.000000000000 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14171000 14172000 Eya1 673.000000000000 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14172000 14173000 Eya1 673.000000000000 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14173000 14174000 Eya1 673.000000000000 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14368000 14369000 Eya1 673.000000000000 68000 0.000594353640 0.000000000000 0.493712968658 0.400000000000
+chr1 14369000 14370000 Eya1 673.000000000000 69000 0.000594353640 0.000000000000 0.488836791153 0.400000000000
+chr1 14370000 14371000 Eya1 673.000000000000 70000 0.000594353640 0.000000000000 0.479367797551 0.400000000000
+chr1 14371000 14372000 Eya1 673.000000000000 71000 0.000594353640 0.000000000000 0.463650820834 0.400000000000
+chr1 14372000 14373000 Eya1 673.000000000000 72000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14373000 14374000 Eya1 673.000000000000 73000 0.000297176820 0.000000000000 0.245023391610 0.200000000000
+chr1 14374000 14375000 Eya1 673.000000000000 74000 0.000297176820 0.000000000000 0.235689167288 0.200000000000
+chr1 14375000 14376000 Eya1 673.000000000000 75000 0.001188707281 0.000000000000 0.918695593883 0.800000000000
+chr1 14376000 14377000 Eya1 673.000000000000 76000 0.001188707281 0.000000000000 0.912345163461 0.800000000000
+chr1 14377000 14378000 Eya1 673.000000000000 77000 0.001188707281 0.000000000000 0.883834376891 0.800000000000
+chr1 14378000 14379000 Eya1 673.000000000000 78000 0.000891530461 0.000000000000 0.729651967113 0.600000000000
+chr1 14379000 14380000 Eya1 673.000000000000 79000 0.000891530461 0.000000000000 0.740569452986 0.600000000000
+chr1 14380000 14381000 Eya1 673.000000000000 80000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14381000 14382000 Eya1 673.000000000000 81000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14382000 14383000 Eya1 673.000000000000 82000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14383000 14384000 Eya1 673.000000000000 83000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14384000 14385000 Eya1 673.000000000000 84000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14390000 14391000 Eya1 673.000000000000 90000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14392000 14393000 Eya1 673.000000000000 92000 0.000891530461 0.000000000000 0.785630557626 0.600000000000
+chr1 14393000 14394000 Eya1 673.000000000000 93000 0.000891530461 0.000000000000 0.815847117037 0.600000000000
+chr1 14394000 14395000 Eya1 673.000000000000 94000 0.000891530461 0.000000000000 0.748031110000 0.600000000000
+chr1 14395000 14396000 Eya1 673.000000000000 95000 0.001485884101 0.000000000000 1.195524760780 1.000000000000
+chr1 14396000 14397000 Eya1 673.000000000000 96000 0.001783060921 0.000000000000 1.394217609153 1.200000000000
+chr1 14397000 14398000 Eya1 673.000000000000 97000 0.001485884101 0.000000000000 1.204251218952 1.000000000000
+chr1 14398000 14399000 Eya1 673.000000000000 98000 0.001783060921 0.000000000000 1.410776013193 1.200000000000
+chr1 14399000 14400000 Eya1 673.000000000000 99000 0.002080237741 0.000000000000 1.767668754158 1.400000000000
+chr1 14400000 14401000 Eya1 673.000000000000 100000 0.001485884101 0.000000000000 1.410106128595 1.000000000000
+chr1 14401000 14402000 Eya1 673.000000000000 101000 0.000594353640 0.000000000000 0.603594208412 0.400000000000
+chr1 14402000 14403000 Eya1 673.000000000000 102000 0.000594353640 0.000000000000 0.587474482247 0.400000000000
+chr1 14403000 14404000 Eya1 673.000000000000 103000 0.000297176820 0.000000000000 0.324555574533 0.200000000000
+chr1 14404000 14405000 Eya1 673.000000000000 104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14405000 14406000 Eya1 673.000000000000 105000 0.000594353640 0.000000000000 0.592751199195 0.400000000000
+chr1 14406000 14407000 Eya1 673.000000000000 106000 0.000594353640 0.000000000000 0.578885673960 0.400000000000
+chr1 14407000 14408000 Eya1 673.000000000000 107000 0.000594353640 0.000000000000 0.556120506836 0.400000000000
+chr1 14408000 14409000 Eya1 673.000000000000 108000 0.000891530461 0.000000000000 0.813611919440 0.600000000000
+chr1 14409000 14410000 Eya1 673.000000000000 109000 0.000891530461 0.000000000000 0.843660087147 0.600000000000
+chr1 14410000 14411000 Eya1 673.000000000000 110000 0.000297176820 0.000000000000 0.291145441917 0.200000000000
+chr1 14411000 14412000 Eya1 673.000000000000 111000 0.000297176820 0.000000000000 0.275736630113 0.200000000000
+chr1 14412000 14413000 Eya1 673.000000000000 112000 0.000297176820 0.000000000000 0.282827000656 0.200000000000
+chr1 14413000 14414000 Eya1 673.000000000000 113000 0.000297176820 0.000000000000 0.290291642960 0.200000000000
+chr1 14414000 14415000 Eya1 673.000000000000 114000 0.000297176820 0.000000000000 0.286096676989 0.200000000000
+chr1 14415000 14416000 Eya1 673.000000000000 115000 0.000297176820 0.000000000000 0.288598980306 0.200000000000
+chr1 14416000 14417000 Eya1 673.000000000000 116000 0.000594353640 0.000000000000 0.664358726512 0.400000000000
+chr1 14417000 14418000 Eya1 673.000000000000 117000 0.000891530461 0.000000000000 1.017014899996 0.600000000000
+chr1 14418000 14419000 Eya1 673.000000000000 118000 0.000594353640 0.000000000000 0.687426738036 0.400000000000
+chr1 14419000 14420000 Eya1 673.000000000000 119000 0.000594353640 0.000000000000 0.671114917005 0.400000000000
+chr1 14420000 14421000 Eya1 673.000000000000 120000 0.000594353640 0.000000000000 0.662136790955 0.400000000000
+chr1 14421000 14422000 Eya1 673.000000000000 121000 0.000297176820 0.000000000000 0.325623191563 0.200000000000
+chr1 14422000 14423000 Eya1 673.000000000000 122000 0.000594353640 0.000000000000 0.668847636862 0.400000000000
+chr1 14423000 14424000 Eya1 673.000000000000 123000 0.000594353640 0.000000000000 0.682685863943 0.400000000000
+chr1 14424000 14425000 Eya1 673.000000000000 124000 0.000594353640 0.000000000000 0.725197437366 0.400000000000
+chr1 14425000 14426000 Eya1 673.000000000000 125000 0.000594353640 0.000000000000 0.791915602137 0.400000000000
+chr1 14426000 14427000 Eya1 673.000000000000 126000 0.001188707281 0.000000000000 1.477454480806 0.800000000000
+chr1 14427000 14428000 Eya1 673.000000000000 127000 0.000594353640 0.000000000000 0.755644658251 0.400000000000
+chr1 14428000 14429000 Eya1 673.000000000000 128000 0.000594353640 0.000000000000 0.791915602137 0.400000000000
+chr1 14429000 14430000 Eya1 673.000000000000 129000 0.000594353640 0.000000000000 0.764397299148 0.400000000000
+chr1 14430000 14431000 Eya1 673.000000000000 130000 0.000594353640 0.000000000000 0.714725272130 0.400000000000
+chr1 14431000 14432000 Eya1 673.000000000000 131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14432000 14433000 Eya1 673.000000000000 132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14433000 14434000 Eya1 673.000000000000 133000 0.000297176820 0.000000000000 0.358657428234 0.200000000000
+chr1 14434000 14435000 Eya1 673.000000000000 134000 0.000297176820 0.000000000000 0.373545095179 0.200000000000
+chr1 14435000 14436000 Eya1 673.000000000000 135000 0.000297176820 0.000000000000 0.391262649240 0.200000000000
+chr1 14436000 14437000 Eya1 673.000000000000 136000 0.000297176820 0.000000000000 0.358657428234 0.200000000000
+chr1 14437000 14438000 Eya1 673.000000000000 137000 0.000297176820 0.000000000000 0.334423818431 0.200000000000
+chr1 14438000 14439000 Eya1 673.000000000000 138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14439000 14440000 Eya1 673.000000000000 139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14443000 14444000 Eya1 673.000000000000 143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14446000 14447000 Eya1 673.000000000000 146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14447000 14448000 Eya1 673.000000000000 147000 0.000594353640 0.000000000000 0.868328510517 0.400000000000
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+chr1 14457000 14458000 Eya1 673.000000000000 157000 0.000594353640 0.000000000000 0.821489212945 0.400000000000
+chr1 14458000 14459000 Eya1 673.000000000000 158000 0.001188707281 0.000000000000 1.583831204275 0.800000000000
+chr1 14459000 14460000 Eya1 673.000000000000 159000 0.000594353640 0.000000000000 0.770345916308 0.400000000000
+chr1 14460000 14461000 Eya1 673.000000000000 160000 0.001188707281 0.000000000000 1.517079697070 0.800000000000
+chr1 14461000 14462000 Eya1 673.000000000000 161000 0.001188707281 0.000000000000 1.429450544260 0.800000000000
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+chr1 14463000 14464000 Eya1 673.000000000000 163000 0.000594353640 0.000000000000 0.821489212945 0.400000000000
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+chr1 14495000 14496000 Eya1 673.000000000000 195000 0.003268945022 0.000000000000 6.680269651133 2.200000000000
+chr1 14496000 14497000 Eya1 673.000000000000 196000 0.002971768202 0.000000000000 6.072972410121 2.000000000000
+chr1 14497000 14498000 Eya1 673.000000000000 197000 0.002080237741 0.000000000000 3.937080406684 1.400000000000
+chr1 14498000 14499000 Eya1 673.000000000000 198000 0.002971768202 0.000000000000 4.852424033528 2.000000000000
+chr1 14499000 14500000 Eya1 673.000000000000 199000 0.003343239227 0.000000000000 5.830530441735 2.250000000000
+chr1 14500000 14501000 Eya1 673.000000000000 200000 0.004457652303 0.000000000000 7.575723225668 3.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/oneGene/MB-E10-5_chr1_genes_Eya1.bigwig
Binary file test-data/cHi-C/chicExportData/oneGene/MB-E10-5_chr1_genes_Eya1.bigwig has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/oneGene/MB-E10-5_chr1_genes_Eya1_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicExportData/oneGene/MB-E10-5_chr1_genes_Eya1_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,402 @@
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+chr1 14100000 14101000 Eya1 832.000000000000 -200000 0.000400641026 0.028365821799 2.426424093120 0.333333333333
+chr1 14101000 14102000 Eya1 832.000000000000 -199000 0.000300480769 0.036748857670 1.429857059822 0.250000000000
+chr1 14102000 14103000 Eya1 832.000000000000 -198000 0.000240384615 0.042850447268 0.931069711724 0.200000000000
+chr1 14103000 14104000 Eya1 832.000000000000 -197000 0.000240384615 0.042850447268 0.889688835341 0.200000000000
+chr1 14104000 14105000 Eya1 832.000000000000 -196000 0.000240384615 0.042850447268 0.976487746811 0.200000000000
+chr1 14105000 14106000 Eya1 832.000000000000 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14106000 14107000 Eya1 832.000000000000 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14107000 14108000 Eya1 832.000000000000 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14108000 14109000 Eya1 832.000000000000 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14109000 14110000 Eya1 832.000000000000 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14110000 14111000 Eya1 832.000000000000 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14111000 14112000 Eya1 832.000000000000 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14112000 14113000 Eya1 832.000000000000 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14113000 14114000 Eya1 832.000000000000 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14114000 14115000 Eya1 832.000000000000 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14115000 14116000 Eya1 832.000000000000 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14116000 14117000 Eya1 832.000000000000 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14117000 14118000 Eya1 832.000000000000 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14118000 14119000 Eya1 832.000000000000 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14119000 14120000 Eya1 832.000000000000 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14120000 14121000 Eya1 832.000000000000 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14121000 14122000 Eya1 832.000000000000 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14122000 14123000 Eya1 832.000000000000 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14123000 14124000 Eya1 832.000000000000 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14124000 14125000 Eya1 832.000000000000 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14125000 14126000 Eya1 832.000000000000 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14126000 14127000 Eya1 832.000000000000 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14127000 14128000 Eya1 832.000000000000 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14128000 14129000 Eya1 832.000000000000 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14129000 14130000 Eya1 832.000000000000 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14130000 14131000 Eya1 832.000000000000 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14131000 14132000 Eya1 832.000000000000 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14132000 14133000 Eya1 832.000000000000 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14133000 14134000 Eya1 832.000000000000 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14134000 14135000 Eya1 832.000000000000 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14135000 14136000 Eya1 832.000000000000 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14136000 14137000 Eya1 832.000000000000 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14137000 14138000 Eya1 832.000000000000 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14138000 14139000 Eya1 832.000000000000 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14139000 14140000 Eya1 832.000000000000 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14140000 14141000 Eya1 832.000000000000 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14141000 14142000 Eya1 832.000000000000 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14142000 14143000 Eya1 832.000000000000 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14143000 14144000 Eya1 832.000000000000 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14144000 14145000 Eya1 832.000000000000 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14145000 14146000 Eya1 832.000000000000 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14146000 14147000 Eya1 832.000000000000 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14147000 14148000 Eya1 832.000000000000 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14148000 14149000 Eya1 832.000000000000 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14149000 14150000 Eya1 832.000000000000 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14150000 14151000 Eya1 832.000000000000 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14151000 14152000 Eya1 832.000000000000 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14152000 14153000 Eya1 832.000000000000 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14153000 14154000 Eya1 832.000000000000 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14154000 14155000 Eya1 832.000000000000 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/oneGene/background_FL-E13-5_chr1_genes_Eya1_interactions.bigwig
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicExportData/oneGene/background_MB-E10-5_chr1_genes_Eya1_interactions.bigwig
Binary file test-data/cHi-C/chicExportData/oneGene/background_MB-E10-5_chr1_genes_Eya1_interactions.bigwig has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicPlotViewpoint/FL-E13-5_chr1_chr1_14300280_14300280_Eya1.png
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicPlotViewpoint/batchMode/plots.tar
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicPlotViewpoint/batchMode/two/Sox17_FL-E13-5_MB-E10-5_chr1_chr1_4487435.png
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicPlotViewpoint/batchMode/two/Tfap2d_FL-E13-5_MB-E10-5_chr1_chr1_19093103.png
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/histogram.png
Binary file test-data/cHi-C/chicQualityControl/histogram.png has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/new_referencepoints.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicQualityControl/new_referencepoints.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,35 @@
+chr1 4487435 4487435 Sox17
+chr1 14300280 14300280 Eya1
+chr1 19093103 19093103 Tfap2d
+chr1 24202042 24202042 Col9a1
+chr1 33776741 33776741 Rab23
+chr1 38684089 38684089 Aff3
+chr1 42753991 42753991 Pou3f3
+chr1 52176282 52176282 Stat1
+chr1 53118507 53118507 Mstn
+chr1 57028178 57028178 Satb2
+chr1 59821123 59821123 Bmpr2
+chr1 66991630 66991630 Myl1
+chr1 74648029 74648029 Stk36
+chr1 74818466 74818466 Wnt6
+chr1 75356867 75356867 Des
+chr1 77511663 77511663 Epha4
+chr1 78193711 78193711 Pax3
+chr1 89102386 89102386 Chrng
+chr1 93355905 93355905 Per2
+chr1 93698054 93698054 Twist2
+chr1 107677300 107677300 Tnfrsf11a
+chr1 120950196 120950196 Gli2
+chr1 122499064 122499064 En1
+chr1 127808791 127808791 Lypd1
+chr1 135934092 135934092 Fmod
+chr1 136186581 136186581 MyoG
+chr1 164004278 164006270 mm712
+chr1 164147754 164147754 Dnm3os
+chr1 165243781 165243781 Prrx1
+chr1 165333772 165333772 Gorab
+chr1 169619689 169619689 Lmx1a
+chr1 182823250 182823250 Lefty2
+chr1 182865170 182865170 Lefty1
+chr1 188529871 188529871 Tgfb2
+chr1 194979306 194979306 Irf6
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/new_referencepoints.bed_failed_reference_points
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/new_referencepoints.bed_raw_filter
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicQualityControl/new_referencepoints.bed_raw_filter Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,47 @@
+# Created with chicQualityControl version 3.7.6
+# A sparsity of -1.0 indicates a faulty reference point e.g. no data for this reference point was in the matrix.
+# Used Matrices 0_matrix.cool 1_matrix.cool
+# Chromosome Start End Sparsity 0_matrix.cool Sparsity 1_matrix.cool
+chr1 4487435 4487435 Sox17 0.14485514485514486 0.16083916083916083
+chr1 14300280 14300280 Eya1 0.14285714285714285 0.1938061938061938
+chr1 19093103 19093103 Tfap2d 0.1048951048951049 0.16683316683316685
+chr1 19198995 19198995 Tfap2b 0.01898101898101898 0.016983016983016984
+chr1 24202042 24202042 Col9a1 0.10589410589410589 0.12787212787212787
+chr1 33776741 33776741 Rab23 0.15484515484515485 0.2137862137862138
+chr1 38684089 38684089 Aff3 0.11588411588411589 0.11388611388611389
+chr1 42753991 42753991 Pou3f3 0.04995004995004995 0.07592407592407592
+chr1 52176282 52176282 Stat1 0.19080919080919082 0.22777222777222778
+chr1 52557292 52557292 Nab1 0.02197802197802198 0.024975024975024976
+chr1 53118507 53118507 Mstn 0.3116883116883117 0.37462537462537465
+chr1 57028178 57028178 Satb2 0.12287712287712288 0.14385614385614387
+chr1 59821123 59821123 Bmpr2 0.14085914085914086 0.16983016983016982
+chr1 66991630 66991630 Myl1 0.0919080919080919 0.09290709290709291
+chr1 74648029 74648029 Stk36 0.2777222777222777 0.3356643356643357
+chr1 74818466 74818466 Wnt6 0.29270729270729273 0.34165834165834164
+chr1 74838593 74838593 Wnt10a 0.00999000999000999 0.008991008991008992
+chr1 74998246 74998246 Ihh 0.008991008991008992 0.003996003996003996
+chr1 75356867 75356867 Des 0.18081918081918083 0.21678321678321677
+chr1 77511663 77511663 Epha4 0.15684315684315683 0.22277722277722278
+chr1 78193711 78193711 Pax3 0.24375624375624375 0.3096903096903097
+chr1 89102386 89102386 Chrng 0.16783216783216784 0.2217782217782218
+chr1 93355905 93355905 Per2 0.15384615384615385 0.16483516483516483
+chr1 93698054 93698054 Twist2 0.22277722277722278 0.23476523476523475
+chr1 94076918 94076918 Hdac4 0.0 0.0
+chr1 107677300 107677300 Tnfrsf11a 0.14685314685314685 0.16383616383616384
+chr1 120950196 120950196 Gli2 0.13986013986013987 0.2007992007992008
+chr1 122499064 122499064 En1 0.1008991008991009 0.11988011988011989
+chr1 127808791 127808791 Lypd1 0.18681318681318682 0.22977022977022976
+chr1 135934092 135934092 Fmod 0.3516483516483517 0.4145854145854146
+chr1 136186581 136186581 MyoG 0.07392607392607392 0.09090909090909091
+chr1 152313295 152313295 Prg4 0.00999000999000999 0.006993006993006993
+chr1 164004278 164006270 mm712 0.26173826173826176 0.2867132867132867
+chr1 164147754 164147754 Dnm3os 0.24875124875124874 0.24675324675324675
+chr1 165243781 165243781 Prrx1 0.36063936063936064 0.34065934065934067
+chr1 165333772 165333772 Gorab 0.36863136863136864 0.3956043956043956
+chr1 169619689 169619689 Lmx1a 0.11888111888111888 0.16783216783216784
+chr1 170362300 170362300 Pbx1 0.003996003996003996 0.002997002997002997
+chr1 180249284 180249284 Gm16586 0.0 0.0
+chr1 182823250 182823250 Lefty2 0.27472527472527475 0.33266733266733267
+chr1 182865170 182865170 Lefty1 0.25674325674325676 0.3086913086913087
+chr1 188529871 188529871 Tgfb2 0.13486513486513488 0.16583416583416583
+chr1 194979306 194979306 Irf6 0.12987012987012986 0.15284715284715283
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/new_referencepoints.bed_rejected_filter
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicQualityControl/new_referencepoints.bed_rejected_filter Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+chr1 19198995 19198995 Tfap2b
+chr1 52557292 52557292 Nab1
+chr1 74838593 74838593 Wnt10a
+chr1 74998246 74998246 Ihh
+chr1 94076918 94076918 Hdac4
+chr1 152313295 152313295 Prg4
+chr1 170362300 170362300 Pbx1
+chr1 180249284 180249284 Gm16586
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/new_referencepoints.bed_report
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicQualityControl/new_referencepoints.bed_report Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,13 @@
+# Created with chicQualityControl version 3.7.6
+# QC report for matrices: 0_matrix.cool 1_matrix.cool
+#Sparsity threshold for rejection: sparsity <= 0.05 are rejected.
+
+Number of reference points: 43
+Number of accepted reference points: 35
+Number of rejected reference points: 8
+Number of faulty reference points: 0
+
+
+A faulty reference point is caused by the non-presence of the chromosome in one of the given matrices.
+It can also be caused by the non-presence of valid Hi-C reads in a region, especially at the chromosome ends.
+Please check the results of hicInfo to validate this for your data.
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicQualityControl/sparsity.png
Binary file test-data/cHi-C/chicQualityControl/sparsity.png has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_1/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_1/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,6 @@
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14274000 14278000 Eya1 673.0 -26000 0.00832095096400000019 0.00283251424532149354 7.81112575817000021061 5.59999999999999964473
+chr1 14296000 14298000 Eya1 673.0 -3000 0.05794947993999999963 0.00000000000000000000 3.78135593591500018817 39.00000000000000000000
+chr1 14314000 14316000 Eya1 673.0 14000 0.01515601783000000008 0.00001082770154392509 3.19033393500999995496 10.19999999999999928946
+chr1 14317000 14319000 Eya1 673.0 17000 0.01456166419000000031 0.00008828123932902443 3.51709033858399999772 9.80000000000000071054
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_1_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_1_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.3.1
+# /tmp/output_target_8dty7wuh/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.bed
+# Mode: x-fold background with 1.5
+# Used p-value: 0.2
+#
+chr1 14274000 14278000
+chr1 14296000 14298000
+chr1 14314000 14319000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_2/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_2/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14274000 14279000 Eya1 673.0 -26000 0.01040118870499999980 0.00284160000885891328 9.15400589712000112286 7.00000000000000000000
+chr1 14285000 14303000 Eya1 673.0 -1000 0.50282317979099999672 0.00136523720299208673 11.07298757284899970443 338.40000000000003410605
+chr1 14304000 14308000 Eya1 673.0 4000 0.05438335809800000364 0.04630738638109899163 4.54925916911999994596 36.60000000000000142109
+chr1 14310000 14322000 Eya1 673.0 11000 0.08142644873500000380 0.00000295000019367997 16.90046348151199850918 54.79999999999999715783
+chr1 14361000 14395000 Eya1 673.0 61000 0.01872213967299999823 0.00000368259652272496 14.85031269307799917101 12.60000000000000142109
+chr1 14491000 14500000 Eya1 673.0 199000 0.02622585438099999874 0.00000000000000932587 49.39210160776001146132 17.64999999999999857891
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_2_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_2_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.2-dev
+# targetFolder/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.bed
+# Mode: loose p-value with 0.5
+# Used p-value: 0.2
+#
+chr1 14274000 14279000
+chr1 14285000 14308000
+chr1 14310000 14322000
+chr1 14361000 14395000
+chr1 14491000 14500000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_3/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_3/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14274000 14278000 Eya1 673.0 -26000 0.00832095096400000019 0.00706210137955387562 7.81112575817000021061 5.59999999999999964473
+chr1 14296000 14298000 Eya1 673.0 -3000 0.05794947993999999963 0.10178166638720864690 3.78135593591500018817 39.00000000000000000000
+chr1 14314000 14316000 Eya1 673.0 14000 0.01515601783000000008 0.04060984916018672841 3.19033393500999995496 10.19999999999999928946
+chr1 14317000 14319000 Eya1 673.0 17000 0.01456166419000000031 0.02428991556274540109 3.51709033858399999772 9.80000000000000071054
+chr1 14480000 14488000 Eya1 673.0 184000 0.01129271916799999900 0.00000047362266253348 19.28508294646199772160 7.59999999999999875655
+chr1 14491000 14501000 Eya1 673.0 200000 0.03068350668399999828 0.00000000000000011102 56.96782483342801128856 20.64999999999999857891
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_3/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_3/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14295000 14298000 Eya1 832.0 -3000 0.05985576923100000002 0.05859241166597439765 4.79015312599299925012 49.79999999999999715783
+chr1 14426000 14432000 Eya1 832.0 130000 0.01081730769300000110 0.00000042985602988210 13.72351582211000042832 9.00000000000000000000
+chr1 14447000 14455000 Eya1 832.0 149000 0.01490384615199999950 0.00000000000003774758 22.36493893927400122834 12.39999999999999857891
+chr1 14460000 14465000 Eya1 832.0 162000 0.00913461538499999934 0.00000409886448993202 12.15366029908999934150 7.59999999999999964473
+chr1 14491000 14501000 Eya1 832.0 200000 0.02253605769199999720 0.00000000000000011102 41.39757163433100117800 18.75000000000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_3_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_3_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.6
+# targetFolder/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt
+# Mode: x-fold background with 1.5
+# Used p-value: 0.2
+#
+chr1 14274000 14278000
+chr1 14296000 14298000
+chr1 14314000 14319000
+chr1 14480000 14488000
+chr1 14491000 14501000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_3_target/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_3_target/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.6
+# targetFolder/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt
+# Mode: x-fold background with 1.5
+# Used p-value: 0.2
+#
+chr1 14295000 14298000
+chr1 14426000 14432000
+chr1 14447000 14455000
+chr1 14460000 14465000
+chr1 14491000 14501000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,6 @@
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14274000 14278000 Eya1 673.0 -26000 0.00832095096400000019 0.00283251424532149354 7.81112575817000021061 5.59999999999999964473
+chr1 14296000 14298000 Eya1 673.0 -3000 0.05794947993999999963 0.00000000000000000000 3.78135593591500018817 39.00000000000000000000
+chr1 14314000 14316000 Eya1 673.0 14000 0.01515601783000000008 0.00001082770154392509 3.19033393500999995496 10.19999999999999928946
+chr1 14317000 14319000 Eya1 673.0 17000 0.01456166419000000031 0.00008828123932902443 3.51709033858399999772 9.80000000000000071054
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 19089000 19091000 Tfap2d 472.0 -3000 0.06101694915199999680 0.00000000000000000000 4.06818820852600016025 28.80000000000000071054
+chr1 19104000 19106000 Tfap2d 472.0 11000 0.02245762711799999950 0.00000021753312740014 3.62722049649999966903 10.59999999999999964473
+chr1 19109000 19114000 Tfap2d 472.0 18000 0.03940677966200000631 0.00000013791919284412 9.61739201792699915927 18.60000000000000142109
+chr1 19125000 19129000 Tfap2d 472.0 33000 0.01652542372999999884 0.19640940181488197869 7.28507499155399962376 7.79999999999999982236
+chr1 19227000 19233000 Tfap2d 472.0 137000 0.01186440677899999914 0.19195463066672580066 14.41899403645599875290 5.59999999999999964473
+chr1 19097000 19098000 Tfap2d 472.0 4000 0.02542372881399999895 0.00000000000002398082 1.62514514601700010843 12.00000000000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_output_significant.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_output_significant.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 4509000 4515000 Sox17 810.0 23000 0.03432098765399999724 0.00000000034537894766 11.55191083898800030738 27.80000000000000071054
+chr1 4585000 4590000 Sox17 810.0 98000 0.00987654320999999807 0.08235176084316242484 8.98479195802099894763 8.00000000000000000000
+chr1 4484000 4485000 Sox17 810.0 -3000 0.03283950617300000069 0.00000000000000000000 1.52393745982299999575 26.60000000000000142109
+chr1 4499000 4500000 Sox17 810.0 12000 0.00987654320999999981 0.00000762924143549171 1.65903762227799989049 8.00000000000000000000
+chr1 4501000 4502000 Sox17 810.0 14000 0.00765432098799999957 0.00092861255189025105 1.57677828943600006895 6.20000000000000017764
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4_significant_files.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4_significant_files.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+FL-E13-5_chr1_chr1_4487435_4487435_Sox17_output_significant.txt
+FL-E13-5_chr1_chr1_14300280_14300280_Eya1_output_significant.txt
+FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_output_significant.txt
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4_target/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.3.1
+# /tmp/output_target_83sqy1lg/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.bed
+# Mode: x-fold background with 1.5
+# Used p-value: 0.2
+#
+chr1 14274000 14278000
+chr1 14296000 14298000
+chr1 14314000 14319000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4_target/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4_target/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,11 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.3.1
+# /tmp/output_target_83sqy1lg/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_target.bed
+# Mode: x-fold background with 1.5
+# Used p-value: 0.2
+#
+chr1 19089000 19091000
+chr1 19097000 19098000
+chr1 19104000 19106000
+chr1 19109000 19114000
+chr1 19125000 19129000
+chr1 19227000 19233000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4_target/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4_target/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.3.1
+# /tmp/output_target_83sqy1lg/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_target.bed
+# Mode: x-fold background with 1.5
+# Used p-value: 0.2
+#
+chr1 4484000 4485000
+chr1 4499000 4502000
+chr1 4509000 4515000
+chr1 4585000 4590000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_4_target_list.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_4_target_list.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+FL-E13-5_chr1_chr1_4487435_4487435_Sox17_target.txt
+FL-E13-5_chr1_chr1_14300280_14300280_Eya1_target.txt
+FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_significant_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5/FL-E13-5_chr1_chr1_14300280_14300280_Eya1_significant_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14274000 14279000 Eya1 673.0 -26000 0.01040118870499999980 0.00132401127244263783 9.15400589712000112286 7.00000000000000000000
+chr1 14295000 14372000 Eya1 673.0 -1000 0.73997028231099992723 0.00000273538672768137 71.55022378473699973256 497.99999999999977262632
+chr1 14391000 14404000 Eya1 673.0 99000 0.01485884100899999803 0.00000099822649402004 12.71460890380599906280 10.00000000000000000000
+chr1 14405000 14431000 Eya1 673.0 126000 0.01485884100399999762 0.00000000706881753132 16.50018487636599928692 10.00000000000000532907
+chr1 14447000 14465000 Eya1 673.0 150000 0.01485884100799999760 0.00000000163091362637 20.98645213257099939597 10.00000000000000177636
+chr1 14476000 14501000 Eya1 673.0 200000 0.04494799405200000653 0.00000000000000011102 81.22289233532099217427 30.24999999999999644729
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_significant_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_significant_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 19088000 19093000 Tfap2d 472.0 -1000 0.25550847457600001089 0.10302839603584690309 8.11832748109999968733 120.59999999999999431566
+chr1 19094000 19118000 Tfap2d 472.0 1000 0.38686440678100009194 0.02157410618457478169 32.83428528261499934615 182.60000000000005115908
+chr1 19124000 19141000 Tfap2d 472.0 33000 0.04661016949300000184 0.00000000000393274302 22.39995010446000023308 22.00000000000000000000
+chr1 19143000 19150000 Tfap2d 472.0 52000 0.01059322034000000079 0.01905738347386221054 7.00310519245599927274 5.00000000000000000000
+chr1 19153000 19185000 Tfap2d 472.0 65000 0.03177966102100000800 0.00000000000269295697 24.96572554191800108470 14.99999999999999467093
+chr1 19186000 19210000 Tfap2d 472.0 108000 0.03177966101800000498 0.00000001275562755421 29.45424687062300250773 15.00000000000000000000
+chr1 19215000 19251000 Tfap2d 472.0 137000 0.04237288135900001140 0.00000000000112376775 56.40252329690899557590 19.99999999999999644729
+chr1 19252000 19264000 Tfap2d 472.0 163000 0.01694915254200000249 0.00000062934133893133 24.34766306781100198009 8.00000000000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_significant_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5/FL-E13-5_chr1_chr1_4487435_4487435_Sox17_significant_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 4480000 4518000 Sox17 810.0 0 0.76049382715799984656 0.00000000602330973987 45.61581246979399395514 616.00000000000011368684
+chr1 4520000 4549000 Sox17 810.0 44000 0.02962962962900000247 0.00000000000001332268 17.03851209048299963911 24.00000000000000710543
+chr1 4557000 4578000 Sox17 810.0 75000 0.02592592592600001522 0.00000000000051858517 20.41795056780900097237 21.00000000000000355271
+chr1 4582000 4590000 Sox17 810.0 98000 0.01111111110999999860 0.00013740149648666655 9.96981855628800062163 9.00000000000000000000
+chr1 4592000 4634000 Sox17 810.0 116000 0.02839506171900002887 0.00000000000000011102 32.07927393785299585716 22.99999999999999289457
+chr1 4641000 4670000 Sox17 810.0 169000 0.01604938270900000546 0.00000000034415081895 23.33313824700799798961 12.99999999999999644729
+chr1 4671000 4688000 Sox17 810.0 191000 0.00763374485400000052 0.00000023615040700697 14.23725687309200438335 6.18333333333300050327
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_significant_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5/MB-E10-5_chr1_chr1_14300280_14300280_Eya1_significant_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,5 @@
+# MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 14290000 14439000 Eya1 832.0 -1000 0.77524038462200028921 0.00000003592597119795 124.40376311550902244107 645.00000000000000000000
+chr1 14444000 14467000 Eya1 832.0 149000 0.03004807692100000191 0.00000000000000011102 43.43355247431500032462 25.00000000000000000000
+chr1 14484000 14501000 Eya1 832.0 200000 0.02902644230799999656 0.00000000000000011102 53.10190206687700253951 24.15000000000000213163
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_significant_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_significant_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,6 @@
+# MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 19077000 19083000 Tfap2d 800.0 -15000 0.01875000000000000278 0.00009145581248537482 9.05078678760400023862 15.00000000000000000000
+chr1 19084000 19118000 Tfap2d 800.0 0 0.64874999999999971578 0.00000005045883955113 44.36507725070399033029 518.99999999999988631316
+chr1 19120000 19249000 Tfap2d 800.0 105000 0.25625000000000008882 0.00000000000000011102 244.06286621622496113559 204.99999999999994315658
+chr1 19258000 19274000 Tfap2d 800.0 169000 0.01000000000000000021 0.00000152506365280747 14.62211731845800244400 8.00000000000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5/MB-E10-5_chr1_chr1_4487435_4487435_Sox17_significant_interactions.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5/MB-E10-5_chr1_chr1_4487435_4487435_Sox17_significant_interactions.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+#Chromosome Start End Gene Sum of interactions Relative position Relative interactions p-value x-fold Raw target
+chr1 4480000 4549000 Sox17 978.0 0 0.81595092025199977837 0.00000000000956168478 62.24249077437998067808 797.99999999999988631316
+chr1 4555000 4575000 Sox17 978.0 78000 0.02147239264300000727 0.00000000000005484502 17.04008783523400438753 21.00000000000000000000
+chr1 4577000 4591000 Sox17 978.0 93000 0.00715746421499999924 0.00023632212134716557 6.23881980673299985085 6.99999999999999911182
+chr1 4599000 4632000 Sox17 978.0 128000 0.01738241309700000112 0.00000000000000011102 20.66516512408400174650 16.99999999999999289457
+chr1 4634000 4662000 Sox17 978.0 169000 0.01635991820800000371 0.00000000000171385128 23.27331220218900398322 15.99999999999999644729
+chr1 4663000 4688000 Sox17 978.0 200000 0.02242672120499999977 0.00000000000000011102 39.41625174041998747043 21.93333333333300316781
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5_significant_files.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5_significant_files.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,6 @@
+FL-E13-5_chr1_chr1_4487435_4487435_Sox17_significant_interactions.txt
+MB-E10-5_chr1_chr1_4487435_4487435_Sox17_significant_interactions.txt
+FL-E13-5_chr1_chr1_14300280_14300280_Eya1_significant_interactions.txt
+MB-E10-5_chr1_chr1_14300280_14300280_Eya1_significant_interactions.txt
+FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d_significant_interactions.txt
+MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_significant_interactions.txt
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5_target/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5_target/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,9 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.6
+# targetFolder/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt
+# Mode: loose p-value with 0.5
+# Used p-value: 0.2
+#
+chr1 14274000 14279000
+chr1 14290000 14439000
+chr1 14444000 14467000
+chr1 14484000 14501000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5_target/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5_target/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.6
+# targetFolder/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt
+# Mode: loose p-value with 0.5
+# Used p-value: 0.2
+#
+chr1 19077000 19118000
+chr1 19120000 19274000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5_target/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_target.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5_target/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_target.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# Significant interactions result file of HiCExplorer's chicSignificantInteractions version 3.6
+# targetFolder/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_target.txt
+# Mode: loose p-value with 0.5
+# Used p-value: 0.2
+#
+chr1 4480000 4549000
+chr1 4555000 4688000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/output_5_target_list.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicSignificantInteractions/output_5_target_list.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_target.txt
+FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_target.txt
+FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_target.txt
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/significantFilesFolder.tar
Binary file test-data/cHi-C/chicSignificantInteractions/significantFilesFolder.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/significantInteractions_dual.hdf5
Binary file test-data/cHi-C/chicSignificantInteractions/significantInteractions_dual.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/significantInteractions_single.hdf5
Binary file test-data/cHi-C/chicSignificantInteractions/significantInteractions_single.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/targetFile_dual.hdf5
Binary file test-data/cHi-C/chicSignificantInteractions/targetFile_dual.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/targetFile_single.hdf5
Binary file test-data/cHi-C/chicSignificantInteractions/targetFile_single.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicSignificantInteractions/targetFolder.tar
Binary file test-data/cHi-C/chicSignificantInteractions/targetFolder.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/fileNames_one_matrix.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/fileNames_one_matrix.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+FL-E13-5_chr1_chr1_4487435_4487435_Sox17.txt
+FL-E13-5_chr1_chr1_14300280_14300280_Eya1.txt
+FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d.txt
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/fileNames_two_matrices.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/fileNames_two_matrices.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,6 @@
+FL-E13-5_chr1_chr1_4487435_4487435_Sox17.txt
+MB-E10-5_chr1_chr1_4487435_4487435_Sox17.txt
+FL-E13-5_chr1_chr1_14300280_14300280_Eya1.txt
+MB-E10-5_chr1_chr1_14300280_14300280_Eya1.txt
+FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d.txt
+MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d.txt
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1.tar
Binary file test-data/cHi-C/chicViewpoint/output_1.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1/FL-E13-5_chr1_chr1_14300280_14300280_Eya1.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_1/FL-E13-5_chr1_chr1_14300280_14300280_Eya1.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.3.1
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 14100000 14101000 Eya1 673.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14101000 14102000 Eya1 673.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14102000 14103000 Eya1 673.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14103000 14104000 Eya1 673.0 -197000 0.000000000000 0.999999994943 0.000000000000 0.000000000000
+chr1 14104000 14105000 Eya1 673.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14105000 14106000 Eya1 673.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14106000 14107000 Eya1 673.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14107000 14108000 Eya1 673.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14108000 14109000 Eya1 673.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14109000 14110000 Eya1 673.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14110000 14111000 Eya1 673.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14111000 14112000 Eya1 673.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14112000 14113000 Eya1 673.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14113000 14114000 Eya1 673.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14114000 14115000 Eya1 673.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14115000 14116000 Eya1 673.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14116000 14117000 Eya1 673.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14117000 14118000 Eya1 673.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14118000 14119000 Eya1 673.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14119000 14120000 Eya1 673.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14120000 14121000 Eya1 673.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14121000 14122000 Eya1 673.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14122000 14123000 Eya1 673.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14123000 14124000 Eya1 673.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14124000 14125000 Eya1 673.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14125000 14126000 Eya1 673.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14126000 14127000 Eya1 673.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14127000 14128000 Eya1 673.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14128000 14129000 Eya1 673.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14129000 14130000 Eya1 673.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14130000 14131000 Eya1 673.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14131000 14132000 Eya1 673.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14132000 14133000 Eya1 673.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14133000 14134000 Eya1 673.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14134000 14135000 Eya1 673.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14135000 14136000 Eya1 673.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14136000 14137000 Eya1 673.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14137000 14138000 Eya1 673.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14138000 14139000 Eya1 673.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14139000 14140000 Eya1 673.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14140000 14141000 Eya1 673.0 -160000 0.000891530461 1.000000000000 4.242405017910 0.600000000000
+chr1 14141000 14142000 Eya1 673.0 -159000 0.000891530461 1.000000000000 4.789812097144 0.600000000000
+chr1 14142000 14143000 Eya1 673.0 -158000 0.000891530461 1.000000000000 4.303889149198 0.600000000000
+chr1 14143000 14144000 Eya1 673.0 -157000 0.000891530461 1.000000000000 4.367181637306 0.600000000000
+chr1 14144000 14145000 Eya1 673.0 -156000 0.000891530461 1.000000000000 5.120143967809 0.600000000000
+chr1 14145000 14146000 Eya1 673.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14146000 14147000 Eya1 673.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14147000 14148000 Eya1 673.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14148000 14149000 Eya1 673.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_1/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.3.1
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 18893000 18894000 Tfap2d 472.0 -200000 0.001412429379 1.000000000000 8.554173074049 0.666666666667
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+chr1 18896000 18897000 Tfap2d 472.0 -197000 0.000847457627 0.999999994943 3.136530131373 0.400000000000
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1/FL-E13-5_chr1_chr1_4487435_4487435_Sox17.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_1/FL-E13-5_chr1_chr1_4487435_4487435_Sox17.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.3.1
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 4287000 4288000 Sox17 810.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4288000 4289000 Sox17 810.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4289000 4290000 Sox17 810.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4290000 4291000 Sox17 810.0 -197000 0.000000000000 0.999999994943 0.000000000000 0.000000000000
+chr1 4291000 4292000 Sox17 810.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4292000 4293000 Sox17 810.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4293000 4294000 Sox17 810.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4294000 4295000 Sox17 810.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4295000 4296000 Sox17 810.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4296000 4297000 Sox17 810.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4297000 4298000 Sox17 810.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4298000 4299000 Sox17 810.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4299000 4300000 Sox17 810.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4300000 4301000 Sox17 810.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4301000 4302000 Sox17 810.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4302000 4303000 Sox17 810.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4303000 4304000 Sox17 810.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4304000 4305000 Sox17 810.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4305000 4306000 Sox17 810.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4306000 4307000 Sox17 810.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4307000 4308000 Sox17 810.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4308000 4309000 Sox17 810.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4309000 4310000 Sox17 810.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4310000 4311000 Sox17 810.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4311000 4312000 Sox17 810.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4312000 4313000 Sox17 810.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4313000 4314000 Sox17 810.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4314000 4315000 Sox17 810.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4315000 4316000 Sox17 810.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4316000 4317000 Sox17 810.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4317000 4318000 Sox17 810.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4318000 4319000 Sox17 810.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4319000 4320000 Sox17 810.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4320000 4321000 Sox17 810.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4321000 4322000 Sox17 810.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4322000 4323000 Sox17 810.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4323000 4324000 Sox17 810.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4324000 4325000 Sox17 810.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4325000 4326000 Sox17 810.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4326000 4327000 Sox17 810.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4327000 4328000 Sox17 810.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4328000 4329000 Sox17 810.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4329000 4330000 Sox17 810.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4330000 4331000 Sox17 810.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4331000 4332000 Sox17 810.0 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4332000 4333000 Sox17 810.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4333000 4334000 Sox17 810.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4334000 4335000 Sox17 810.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4335000 4336000 Sox17 810.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4336000 4337000 Sox17 810.0 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4337000 4338000 Sox17 810.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4338000 4339000 Sox17 810.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4339000 4340000 Sox17 810.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4340000 4341000 Sox17 810.0 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4341000 4342000 Sox17 810.0 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4342000 4343000 Sox17 810.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4343000 4344000 Sox17 810.0 -144000 0.000000000000 0.941276100920 0.000000000000 0.000000000000
+chr1 4344000 4345000 Sox17 810.0 -143000 0.000000000000 0.772370955375 0.000000000000 0.000000000000
+chr1 4345000 4346000 Sox17 810.0 -142000 0.000000000000 0.571035127843 0.000000000000 0.000000000000
+chr1 4346000 4347000 Sox17 810.0 -141000 0.000000000000 0.562577575480 0.000000000000 0.000000000000
+chr1 4347000 4348000 Sox17 810.0 -140000 0.000000000000 0.845939027270 0.000000000000 0.000000000000
+chr1 4348000 4349000 Sox17 810.0 -139000 0.000000000000 0.993879662368 0.000000000000 0.000000000000
+chr1 4349000 4350000 Sox17 810.0 -138000 0.000000000000 0.935848644545 0.000000000000 0.000000000000
+chr1 4350000 4351000 Sox17 810.0 -137000 0.000000000000 0.934280976005 0.000000000000 0.000000000000
+chr1 4351000 4352000 Sox17 810.0 -136000 0.000000000000 0.765933322800 0.000000000000 0.000000000000
+chr1 4352000 4353000 Sox17 810.0 -135000 0.000000000000 0.494942888612 0.000000000000 0.000000000000
+chr1 4353000 4354000 Sox17 810.0 -134000 0.000000000000 0.675370356213 0.000000000000 0.000000000000
+chr1 4354000 4355000 Sox17 810.0 -133000 0.000000000000 0.740631235201 0.000000000000 0.000000000000
+chr1 4355000 4356000 Sox17 810.0 -132000 0.000000000000 0.812828874743 0.000000000000 0.000000000000
+chr1 4356000 4357000 Sox17 810.0 -131000 0.000000000000 0.815309879139 0.000000000000 0.000000000000
+chr1 4357000 4358000 Sox17 810.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4358000 4359000 Sox17 810.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4359000 4360000 Sox17 810.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4360000 4361000 Sox17 810.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4361000 4362000 Sox17 810.0 -126000 0.000000000000 0.999908856025 0.000000000000 0.000000000000
+chr1 4362000 4363000 Sox17 810.0 -125000 0.000000000000 0.989373291152 0.000000000000 0.000000000000
+chr1 4363000 4364000 Sox17 810.0 -124000 0.000000000000 0.788439708299 0.000000000000 0.000000000000
+chr1 4364000 4365000 Sox17 810.0 -123000 0.000000000000 0.576822673654 0.000000000000 0.000000000000
+chr1 4365000 4366000 Sox17 810.0 -122000 0.000000000000 0.829253917560 0.000000000000 0.000000000000
+chr1 4366000 4367000 Sox17 810.0 -121000 0.000000000000 0.851570390317 0.000000000000 0.000000000000
+chr1 4367000 4368000 Sox17 810.0 -120000 0.000000000000 0.892626485998 0.000000000000 0.000000000000
+chr1 4368000 4369000 Sox17 810.0 -119000 0.000000000000 0.997932461760 0.000000000000 0.000000000000
+chr1 4369000 4370000 Sox17 810.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4370000 4371000 Sox17 810.0 -117000 0.000000000000 0.998582513568 0.000000000000 0.000000000000
+chr1 4371000 4372000 Sox17 810.0 -116000 0.000000000000 0.947207785640 0.000000000000 0.000000000000
+chr1 4372000 4373000 Sox17 810.0 -115000 0.000000000000 0.956546267618 0.000000000000 0.000000000000
+chr1 4373000 4374000 Sox17 810.0 -114000 0.000000000000 0.888274895550 0.000000000000 0.000000000000
+chr1 4374000 4375000 Sox17 810.0 -113000 0.000000000000 0.999715613680 0.000000000000 0.000000000000
+chr1 4375000 4376000 Sox17 810.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4376000 4377000 Sox17 810.0 -111000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4377000 4378000 Sox17 810.0 -110000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4378000 4379000 Sox17 810.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4379000 4380000 Sox17 810.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4380000 4381000 Sox17 810.0 -107000 0.000000000000 0.999980833478 0.000000000000 0.000000000000
+chr1 4381000 4382000 Sox17 810.0 -106000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4382000 4383000 Sox17 810.0 -105000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4383000 4384000 Sox17 810.0 -104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4384000 4385000 Sox17 810.0 -103000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4385000 4386000 Sox17 810.0 -102000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4386000 4387000 Sox17 810.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4387000 4388000 Sox17 810.0 -100000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4388000 4389000 Sox17 810.0 -99000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4389000 4390000 Sox17 810.0 -98000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4390000 4391000 Sox17 810.0 -97000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4391000 4392000 Sox17 810.0 -96000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4392000 4393000 Sox17 810.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4393000 4394000 Sox17 810.0 -94000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4394000 4395000 Sox17 810.0 -93000 0.000000000000 0.999999644322 0.000000000000 0.000000000000
+chr1 4395000 4396000 Sox17 810.0 -92000 0.000000000000 0.450093508063 0.000000000000 0.000000000000
+chr1 4396000 4397000 Sox17 810.0 -91000 0.000000000000 0.335809734233 0.000000000000 0.000000000000
+chr1 4397000 4398000 Sox17 810.0 -90000 0.000000000000 0.293149326843 0.000000000000 0.000000000000
+chr1 4398000 4399000 Sox17 810.0 -89000 0.000000000000 0.238944983633 0.000000000000 0.000000000000
+chr1 4399000 4400000 Sox17 810.0 -88000 0.000000000000 0.283561106217 0.000000000000 0.000000000000
+chr1 4400000 4401000 Sox17 810.0 -87000 0.000000000000 0.604628072385 0.000000000000 0.000000000000
+chr1 4401000 4402000 Sox17 810.0 -86000 0.000000000000 0.704711576028 0.000000000000 0.000000000000
+chr1 4402000 4403000 Sox17 810.0 -85000 0.000000000000 0.539378374195 0.000000000000 0.000000000000
+chr1 4403000 4404000 Sox17 810.0 -84000 0.000000000000 0.380536780988 0.000000000000 0.000000000000
+chr1 4404000 4405000 Sox17 810.0 -83000 0.000000000000 0.509684490139 0.000000000000 0.000000000000
+chr1 4405000 4406000 Sox17 810.0 -82000 0.000000000000 0.507952063410 0.000000000000 0.000000000000
+chr1 4406000 4407000 Sox17 810.0 -81000 0.000000000000 0.634773536281 0.000000000000 0.000000000000
+chr1 4407000 4408000 Sox17 810.0 -80000 0.000000000000 0.825366169254 0.000000000000 0.000000000000
+chr1 4408000 4409000 Sox17 810.0 -79000 0.000000000000 0.999999874355 0.000000000000 0.000000000000
+chr1 4409000 4410000 Sox17 810.0 -78000 0.000000000000 0.999999901815 0.000000000000 0.000000000000
+chr1 4410000 4411000 Sox17 810.0 -77000 0.000000000000 0.768775222592 0.000000000000 0.000000000000
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+chr1 4418000 4419000 Sox17 810.0 -69000 0.000000000000 0.999999999930 0.000000000000 0.000000000000
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1/MB-E10-5_chr1_chr1_14300280_14300280_Eya1.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_1/MB-E10-5_chr1_chr1_14300280_14300280_Eya1.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.3.1
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 14100000 14101000 Eya1 832.0 -200000 0.000400641026 1.000000000000 2.426424093120 0.333333333333
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+chr1 14102000 14103000 Eya1 832.0 -198000 0.000240384615 1.000000000000 0.931069711724 0.200000000000
+chr1 14103000 14104000 Eya1 832.0 -197000 0.000240384615 0.999999994943 0.889688835341 0.200000000000
+chr1 14104000 14105000 Eya1 832.0 -196000 0.000240384615 1.000000000000 0.976487746811 0.200000000000
+chr1 14105000 14106000 Eya1 832.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14106000 14107000 Eya1 832.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14107000 14108000 Eya1 832.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14108000 14109000 Eya1 832.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14109000 14110000 Eya1 832.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14482000 14483000 Eya1 832.0 182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14483000 14484000 Eya1 832.0 183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14484000 14485000 Eya1 832.0 184000 0.000240384615 1.000000000000 0.390595098725 0.200000000000
+chr1 14485000 14486000 Eya1 832.0 185000 0.000961538462 1.000000000000 1.539846062099 0.800000000000
+chr1 14486000 14487000 Eya1 832.0 186000 0.000961538462 1.000000000000 1.703659471393 0.800000000000
+chr1 14487000 14488000 Eya1 832.0 187000 0.000961538462 1.000000000000 1.731286381939 0.800000000000
+chr1 14488000 14489000 Eya1 832.0 188000 0.001201923077 0.000000000000 2.140962437394 1.000000000000
+chr1 14489000 14490000 Eya1 832.0 189000 0.001442307692 0.000000000000 2.793209135173 1.200000000000
+chr1 14490000 14491000 Eya1 832.0 190000 0.000721153846 1.000000000000 1.404771845823 0.600000000000
+chr1 14491000 14492000 Eya1 832.0 191000 0.001442307692 0.000000000000 2.669066506024 1.200000000000
+chr1 14492000 14493000 Eya1 832.0 192000 0.002403846154 0.000000000000 4.399560174407 2.000000000000
+chr1 14493000 14494000 Eya1 832.0 193000 0.002163461538 0.000000000000 4.289571172663 1.800000000000
+chr1 14494000 14495000 Eya1 832.0 194000 0.001682692308 0.000000000000 3.239907320421 1.400000000000
+chr1 14495000 14496000 Eya1 832.0 195000 0.002163461538 0.000000000000 4.421153111551 1.800000000000
+chr1 14496000 14497000 Eya1 832.0 196000 0.001682692308 0.000000000000 3.438674642317 1.400000000000
+chr1 14497000 14498000 Eya1 832.0 197000 0.001442307692 0.000000000000 2.729727108893 1.200000000000
+chr1 14498000 14499000 Eya1 832.0 198000 0.002644230769 0.000000000000 4.317607586564 2.200000000000
+chr1 14499000 14500000 Eya1 832.0 199000 0.003305288462 0.000000000000 5.764345200343 2.750000000000
+chr1 14500000 14501000 Eya1 832.0 200000 0.003605769231 0.000000000000 6.127958811148 3.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_1/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.3.1
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 18893000 18894000 Tfap2d 800.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18894000 18895000 Tfap2d 800.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18895000 18896000 Tfap2d 800.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18896000 18897000 Tfap2d 800.0 -197000 0.000000000000 0.999999994943 0.000000000000 0.000000000000
+chr1 18897000 18898000 Tfap2d 800.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18898000 18899000 Tfap2d 800.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18899000 18900000 Tfap2d 800.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18900000 18901000 Tfap2d 800.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18901000 18902000 Tfap2d 800.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18902000 18903000 Tfap2d 800.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18903000 18904000 Tfap2d 800.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18904000 18905000 Tfap2d 800.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18905000 18906000 Tfap2d 800.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18906000 18907000 Tfap2d 800.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18907000 18908000 Tfap2d 800.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18908000 18909000 Tfap2d 800.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18909000 18910000 Tfap2d 800.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18910000 18911000 Tfap2d 800.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18911000 18912000 Tfap2d 800.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18912000 18913000 Tfap2d 800.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18913000 18914000 Tfap2d 800.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18914000 18915000 Tfap2d 800.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18915000 18916000 Tfap2d 800.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18916000 18917000 Tfap2d 800.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18917000 18918000 Tfap2d 800.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18918000 18919000 Tfap2d 800.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18919000 18920000 Tfap2d 800.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18920000 18921000 Tfap2d 800.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18921000 18922000 Tfap2d 800.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18922000 18923000 Tfap2d 800.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18923000 18924000 Tfap2d 800.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18924000 18925000 Tfap2d 800.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18925000 18926000 Tfap2d 800.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18926000 18927000 Tfap2d 800.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18927000 18928000 Tfap2d 800.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18928000 18929000 Tfap2d 800.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18929000 18930000 Tfap2d 800.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18930000 18931000 Tfap2d 800.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18931000 18932000 Tfap2d 800.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18932000 18933000 Tfap2d 800.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18933000 18934000 Tfap2d 800.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18934000 18935000 Tfap2d 800.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18935000 18936000 Tfap2d 800.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18936000 18937000 Tfap2d 800.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 18938000 18939000 Tfap2d 800.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18939000 18940000 Tfap2d 800.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18940000 18941000 Tfap2d 800.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18941000 18942000 Tfap2d 800.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 18943000 18944000 Tfap2d 800.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18944000 18945000 Tfap2d 800.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 18948000 18949000 Tfap2d 800.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18949000 18950000 Tfap2d 800.0 -144000 0.000000000000 0.941276100920 0.000000000000 0.000000000000
+chr1 18950000 18951000 Tfap2d 800.0 -143000 0.000000000000 0.772370955375 0.000000000000 0.000000000000
+chr1 18951000 18952000 Tfap2d 800.0 -142000 0.000000000000 0.571035127843 0.000000000000 0.000000000000
+chr1 18952000 18953000 Tfap2d 800.0 -141000 0.000000000000 0.562577575480 0.000000000000 0.000000000000
+chr1 18953000 18954000 Tfap2d 800.0 -140000 0.000000000000 0.845939027270 0.000000000000 0.000000000000
+chr1 18954000 18955000 Tfap2d 800.0 -139000 0.000000000000 0.993879662368 0.000000000000 0.000000000000
+chr1 18955000 18956000 Tfap2d 800.0 -138000 0.000000000000 0.935848644545 0.000000000000 0.000000000000
+chr1 18956000 18957000 Tfap2d 800.0 -137000 0.000000000000 0.934280976005 0.000000000000 0.000000000000
+chr1 18957000 18958000 Tfap2d 800.0 -136000 0.000000000000 0.765933322800 0.000000000000 0.000000000000
+chr1 18958000 18959000 Tfap2d 800.0 -135000 0.000000000000 0.494942888612 0.000000000000 0.000000000000
+chr1 18959000 18960000 Tfap2d 800.0 -134000 0.000000000000 0.675370356213 0.000000000000 0.000000000000
+chr1 18960000 18961000 Tfap2d 800.0 -133000 0.000000000000 0.740631235201 0.000000000000 0.000000000000
+chr1 18961000 18962000 Tfap2d 800.0 -132000 0.000000000000 0.812828874743 0.000000000000 0.000000000000
+chr1 18962000 18963000 Tfap2d 800.0 -131000 0.000000000000 0.815309879139 0.000000000000 0.000000000000
+chr1 18963000 18964000 Tfap2d 800.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18964000 18965000 Tfap2d 800.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18965000 18966000 Tfap2d 800.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18966000 18967000 Tfap2d 800.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18967000 18968000 Tfap2d 800.0 -126000 0.000000000000 0.999908856025 0.000000000000 0.000000000000
+chr1 18968000 18969000 Tfap2d 800.0 -125000 0.000000000000 0.989373291152 0.000000000000 0.000000000000
+chr1 18969000 18970000 Tfap2d 800.0 -124000 0.000000000000 0.788439708299 0.000000000000 0.000000000000
+chr1 18970000 18971000 Tfap2d 800.0 -123000 0.000000000000 0.576822673654 0.000000000000 0.000000000000
+chr1 18971000 18972000 Tfap2d 800.0 -122000 0.000000000000 0.829253917560 0.000000000000 0.000000000000
+chr1 18972000 18973000 Tfap2d 800.0 -121000 0.000000000000 0.851570390317 0.000000000000 0.000000000000
+chr1 18973000 18974000 Tfap2d 800.0 -120000 0.000000000000 0.892626485998 0.000000000000 0.000000000000
+chr1 18974000 18975000 Tfap2d 800.0 -119000 0.000000000000 0.997932461760 0.000000000000 0.000000000000
+chr1 18975000 18976000 Tfap2d 800.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 18977000 18978000 Tfap2d 800.0 -116000 0.000000000000 0.947207785640 0.000000000000 0.000000000000
+chr1 18978000 18979000 Tfap2d 800.0 -115000 0.000000000000 0.956546267618 0.000000000000 0.000000000000
+chr1 18979000 18980000 Tfap2d 800.0 -114000 0.000000000000 0.888274895550 0.000000000000 0.000000000000
+chr1 18980000 18981000 Tfap2d 800.0 -113000 0.000000000000 0.999715613680 0.000000000000 0.000000000000
+chr1 18981000 18982000 Tfap2d 800.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18982000 18983000 Tfap2d 800.0 -111000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18983000 18984000 Tfap2d 800.0 -110000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18984000 18985000 Tfap2d 800.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18985000 18986000 Tfap2d 800.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18986000 18987000 Tfap2d 800.0 -107000 0.000500000000 0.999980833478 1.387914584417 0.400000000000
+chr1 18987000 18988000 Tfap2d 800.0 -106000 0.000500000000 1.000000000000 1.682320705695 0.400000000000
+chr1 18988000 18989000 Tfap2d 800.0 -105000 0.000500000000 1.000000000000 1.734893228113 0.400000000000
+chr1 18989000 18990000 Tfap2d 800.0 -104000 0.000500000000 1.000000000000 2.081871876625 0.400000000000
+chr1 18990000 18991000 Tfap2d 800.0 -103000 0.000500000000 1.000000000000 2.281503428260 0.400000000000
+chr1 18991000 18992000 Tfap2d 800.0 -102000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18992000 18993000 Tfap2d 800.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18993000 18994000 Tfap2d 800.0 -100000 0.000250000000 1.000000000000 1.028084877240 0.200000000000
+chr1 18994000 18995000 Tfap2d 800.0 -99000 0.000250000000 1.000000000000 0.946305397749 0.200000000000
+chr1 18995000 18996000 Tfap2d 800.0 -98000 0.000250000000 1.000000000000 0.885902925125 0.200000000000
+chr1 18996000 18997000 Tfap2d 800.0 -97000 0.000250000000 1.000000000000 0.832748749263 0.200000000000
+chr1 18997000 18998000 Tfap2d 800.0 -96000 0.000250000000 1.000000000000 0.763989677803 0.200000000000
+chr1 18998000 18999000 Tfap2d 800.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18999000 19000000 Tfap2d 800.0 -94000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19000000 19001000 Tfap2d 800.0 -93000 0.000000000000 0.999999644322 0.000000000000 0.000000000000
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+chr1 19257000 19258000 Tfap2d 800.0 164000 0.000000000000 0.999664588125 0.000000000000 0.000000000000
+chr1 19258000 19259000 Tfap2d 800.0 165000 0.000250000000 0.999918251505 0.383755184381 0.200000000000
+chr1 19259000 19260000 Tfap2d 800.0 166000 0.000500000000 0.989304103068 0.832748750650 0.400000000000
+chr1 19260000 19261000 Tfap2d 800.0 167000 0.000750000000 1.000000000000 1.195333134476 0.600000000000
+chr1 19261000 19262000 Tfap2d 800.0 168000 0.000750000000 0.999999999417 1.161975000232 0.600000000000
+chr1 19262000 19263000 Tfap2d 800.0 169000 0.001000000000 0.997208984795 1.399577730324 0.800000000000
+chr1 19263000 19264000 Tfap2d 800.0 170000 0.000750000000 0.999780212263 1.015547256684 0.600000000000
+chr1 19264000 19265000 Tfap2d 800.0 171000 0.000750000000 0.981475867334 1.028084877240 0.600000000000
+chr1 19265000 19266000 Tfap2d 800.0 172000 0.000500000000 0.944032684304 0.643049227908 0.400000000000
+chr1 19266000 19267000 Tfap2d 800.0 173000 0.000750000000 0.999936032663 0.983561516064 0.600000000000
+chr1 19267000 19268000 Tfap2d 800.0 174000 0.000500000000 0.999594131731 0.693957291245 0.400000000000
+chr1 19268000 19269000 Tfap2d 800.0 175000 0.000750000000 1.000000000000 1.076830279776 0.600000000000
+chr1 19269000 19270000 Tfap2d 800.0 176000 0.000750000000 1.000000000000 1.063083510150 0.600000000000
+chr1 19270000 19271000 Tfap2d 800.0 177000 0.000750000000 1.000000000000 1.135566477299 0.600000000000
+chr1 19271000 19272000 Tfap2d 800.0 178000 0.000500000000 1.000000000000 0.785612028545 0.400000000000
+chr1 19272000 19273000 Tfap2d 800.0 179000 0.000500000000 1.000000000000 0.800719952292 0.400000000000
+chr1 19273000 19274000 Tfap2d 800.0 180000 0.000250000000 1.000000000000 0.422715101192 0.200000000000
+chr1 19274000 19275000 Tfap2d 800.0 181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19275000 19276000 Tfap2d 800.0 182000 0.000250000000 1.000000000000 0.447714381549 0.200000000000
+chr1 19276000 19277000 Tfap2d 800.0 183000 0.000250000000 1.000000000000 0.433723307028 0.200000000000
+chr1 19277000 19278000 Tfap2d 800.0 184000 0.000750000000 1.000000000000 1.218656708021 0.600000000000
+chr1 19278000 19279000 Tfap2d 800.0 185000 0.000750000000 1.000000000000 1.201079928437 0.600000000000
+chr1 19279000 19280000 Tfap2d 800.0 186000 0.000750000000 1.000000000000 1.328854387687 0.600000000000
+chr1 19280000 19281000 Tfap2d 800.0 187000 0.000500000000 1.000000000000 0.900268918608 0.400000000000
+chr1 19281000 19282000 Tfap2d 800.0 188000 0.000500000000 1.000000000000 0.890640373956 0.400000000000
+chr1 19282000 19283000 Tfap2d 800.0 189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19283000 19284000 Tfap2d 800.0 190000 0.000250000000 1.000000000000 0.486987573219 0.200000000000
+chr1 19284000 19285000 Tfap2d 800.0 191000 0.000250000000 1.000000000000 0.462638194377 0.200000000000
+chr1 19285000 19286000 Tfap2d 800.0 192000 0.000250000000 1.000000000000 0.457554258138 0.200000000000
+chr1 19286000 19287000 Tfap2d 800.0 193000 0.000500000000 1.000000000000 0.991367559904 0.400000000000
+chr1 19287000 19288000 Tfap2d 800.0 194000 0.000500000000 1.000000000000 0.962715318068 0.400000000000
+chr1 19288000 19289000 Tfap2d 800.0 195000 0.000250000000 1.000000000000 0.510888804001 0.200000000000
+chr1 19289000 19290000 Tfap2d 800.0 196000 0.000250000000 1.000000000000 0.510888804001 0.200000000000
+chr1 19290000 19291000 Tfap2d 800.0 197000 0.000250000000 1.000000000000 0.473152698875 0.200000000000
+chr1 19291000 19292000 Tfap2d 800.0 198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19292000 19293000 Tfap2d 800.0 199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19293000 19294000 Tfap2d 800.0 200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_1/MB-E10-5_chr1_chr1_4487435_4487435_Sox17.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_1/MB-E10-5_chr1_chr1_4487435_4487435_Sox17.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.3.1
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 4287000 4288000 Sox17 978.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4288000 4289000 Sox17 978.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4289000 4290000 Sox17 978.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4290000 4291000 Sox17 978.0 -197000 0.000000000000 0.999999994943 0.000000000000 0.000000000000
+chr1 4291000 4292000 Sox17 978.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4292000 4293000 Sox17 978.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4293000 4294000 Sox17 978.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4294000 4295000 Sox17 978.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4295000 4296000 Sox17 978.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4296000 4297000 Sox17 978.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4297000 4298000 Sox17 978.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4298000 4299000 Sox17 978.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4299000 4300000 Sox17 978.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4300000 4301000 Sox17 978.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4301000 4302000 Sox17 978.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4302000 4303000 Sox17 978.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4303000 4304000 Sox17 978.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4304000 4305000 Sox17 978.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4305000 4306000 Sox17 978.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4306000 4307000 Sox17 978.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4308000 4309000 Sox17 978.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4309000 4310000 Sox17 978.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4310000 4311000 Sox17 978.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4311000 4312000 Sox17 978.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4312000 4313000 Sox17 978.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4313000 4314000 Sox17 978.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4314000 4315000 Sox17 978.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4315000 4316000 Sox17 978.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4316000 4317000 Sox17 978.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4317000 4318000 Sox17 978.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4318000 4319000 Sox17 978.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4319000 4320000 Sox17 978.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4320000 4321000 Sox17 978.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4321000 4322000 Sox17 978.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4322000 4323000 Sox17 978.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4323000 4324000 Sox17 978.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4324000 4325000 Sox17 978.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4325000 4326000 Sox17 978.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4326000 4327000 Sox17 978.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4327000 4328000 Sox17 978.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4328000 4329000 Sox17 978.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4329000 4330000 Sox17 978.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4330000 4331000 Sox17 978.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4331000 4332000 Sox17 978.0 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4332000 4333000 Sox17 978.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4338000 4339000 Sox17 978.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4339000 4340000 Sox17 978.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4342000 4343000 Sox17 978.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4343000 4344000 Sox17 978.0 -144000 0.000000000000 0.941276100920 0.000000000000 0.000000000000
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+chr1 4345000 4346000 Sox17 978.0 -142000 0.000000000000 0.571035127843 0.000000000000 0.000000000000
+chr1 4346000 4347000 Sox17 978.0 -141000 0.000000000000 0.562577575480 0.000000000000 0.000000000000
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+chr1 4348000 4349000 Sox17 978.0 -139000 0.000000000000 0.993879662368 0.000000000000 0.000000000000
+chr1 4349000 4350000 Sox17 978.0 -138000 0.000000000000 0.935848644545 0.000000000000 0.000000000000
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+chr1 4353000 4354000 Sox17 978.0 -134000 0.000000000000 0.675370356213 0.000000000000 0.000000000000
+chr1 4354000 4355000 Sox17 978.0 -133000 0.000000000000 0.740631235201 0.000000000000 0.000000000000
+chr1 4355000 4356000 Sox17 978.0 -132000 0.000000000000 0.812828874743 0.000000000000 0.000000000000
+chr1 4356000 4357000 Sox17 978.0 -131000 0.000000000000 0.815309879139 0.000000000000 0.000000000000
+chr1 4357000 4358000 Sox17 978.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4358000 4359000 Sox17 978.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4359000 4360000 Sox17 978.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4360000 4361000 Sox17 978.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4361000 4362000 Sox17 978.0 -126000 0.000000000000 0.999908856025 0.000000000000 0.000000000000
+chr1 4362000 4363000 Sox17 978.0 -125000 0.000000000000 0.989373291152 0.000000000000 0.000000000000
+chr1 4363000 4364000 Sox17 978.0 -124000 0.000000000000 0.788439708299 0.000000000000 0.000000000000
+chr1 4364000 4365000 Sox17 978.0 -123000 0.000000000000 0.576822673654 0.000000000000 0.000000000000
+chr1 4365000 4366000 Sox17 978.0 -122000 0.000000000000 0.829253917560 0.000000000000 0.000000000000
+chr1 4366000 4367000 Sox17 978.0 -121000 0.000000000000 0.851570390317 0.000000000000 0.000000000000
+chr1 4367000 4368000 Sox17 978.0 -120000 0.000000000000 0.892626485998 0.000000000000 0.000000000000
+chr1 4368000 4369000 Sox17 978.0 -119000 0.000000000000 0.997932461760 0.000000000000 0.000000000000
+chr1 4369000 4370000 Sox17 978.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4370000 4371000 Sox17 978.0 -117000 0.000000000000 0.998582513568 0.000000000000 0.000000000000
+chr1 4371000 4372000 Sox17 978.0 -116000 0.000000000000 0.947207785640 0.000000000000 0.000000000000
+chr1 4372000 4373000 Sox17 978.0 -115000 0.000000000000 0.956546267618 0.000000000000 0.000000000000
+chr1 4373000 4374000 Sox17 978.0 -114000 0.000000000000 0.888274895550 0.000000000000 0.000000000000
+chr1 4374000 4375000 Sox17 978.0 -113000 0.000000000000 0.999715613680 0.000000000000 0.000000000000
+chr1 4375000 4376000 Sox17 978.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4378000 4379000 Sox17 978.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4379000 4380000 Sox17 978.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4380000 4381000 Sox17 978.0 -107000 0.000000000000 0.999980833478 0.000000000000 0.000000000000
+chr1 4381000 4382000 Sox17 978.0 -106000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4382000 4383000 Sox17 978.0 -105000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4383000 4384000 Sox17 978.0 -104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4386000 4387000 Sox17 978.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4387000 4388000 Sox17 978.0 -100000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4388000 4389000 Sox17 978.0 -99000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4389000 4390000 Sox17 978.0 -98000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4390000 4391000 Sox17 978.0 -97000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4391000 4392000 Sox17 978.0 -96000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4392000 4393000 Sox17 978.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4393000 4394000 Sox17 978.0 -94000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4394000 4395000 Sox17 978.0 -93000 0.000000000000 0.999999644322 0.000000000000 0.000000000000
+chr1 4395000 4396000 Sox17 978.0 -92000 0.000000000000 0.450093508063 0.000000000000 0.000000000000
+chr1 4396000 4397000 Sox17 978.0 -91000 0.000000000000 0.335809734233 0.000000000000 0.000000000000
+chr1 4397000 4398000 Sox17 978.0 -90000 0.000000000000 0.293149326843 0.000000000000 0.000000000000
+chr1 4398000 4399000 Sox17 978.0 -89000 0.000000000000 0.238944983633 0.000000000000 0.000000000000
+chr1 4399000 4400000 Sox17 978.0 -88000 0.000000000000 0.283561106217 0.000000000000 0.000000000000
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+chr1 4401000 4402000 Sox17 978.0 -86000 0.000000000000 0.704711576028 0.000000000000 0.000000000000
+chr1 4402000 4403000 Sox17 978.0 -85000 0.000000000000 0.539378374195 0.000000000000 0.000000000000
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+chr1 4656000 4657000 Sox17 978.0 169000 0.001226993865 0.002791015205 1.717273288741 1.200000000000
+chr1 4657000 4658000 Sox17 978.0 170000 0.001226993865 0.000219787737 1.661427004800 1.200000000000
+chr1 4658000 4659000 Sox17 978.0 171000 0.000613496933 0.981475867334 0.840969224736 0.600000000000
+chr1 4659000 4660000 Sox17 978.0 172000 0.000613496933 0.944032684304 0.789017457556 0.600000000000
+chr1 4660000 4661000 Sox17 978.0 173000 0.000613496933 0.999936032663 0.804549297394 0.600000000000
+chr1 4661000 4662000 Sox17 978.0 174000 0.000204498978 0.999594131731 0.283827112984 0.200000000000
+chr1 4662000 4663000 Sox17 978.0 175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4663000 4664000 Sox17 978.0 176000 0.000408997955 1.000000000000 0.579731975542 0.400000000000
+chr1 4664000 4665000 Sox17 978.0 177000 0.001022494888 0.000000000000 1.548147889979 1.000000000000
+chr1 4665000 4666000 Sox17 978.0 178000 0.001022494888 0.000000000000 1.606568565531 1.000000000000
+chr1 4666000 4667000 Sox17 978.0 179000 0.001226993865 0.000000000000 1.964956938139 1.200000000000
+chr1 4667000 4668000 Sox17 978.0 180000 0.001226993865 0.000000000000 2.074675343272 1.200000000000
+chr1 4668000 4669000 Sox17 978.0 181000 0.001022494888 0.000000000000 1.737717018021 1.000000000000
+chr1 4669000 4670000 Sox17 978.0 182000 0.000408997955 1.000000000000 0.732457065928 0.400000000000
+chr1 4670000 4671000 Sox17 978.0 183000 0.000613496933 1.000000000000 1.064351673689 0.600000000000
+chr1 4671000 4672000 Sox17 978.0 184000 0.000817995910 1.000000000000 1.329141603840 0.800000000000
+chr1 4672000 4673000 Sox17 978.0 185000 0.000817995910 1.000000000000 1.309971292093 0.800000000000
+chr1 4673000 4674000 Sox17 978.0 186000 0.000817995910 1.000000000000 1.449329938854 0.800000000000
+chr1 4674000 4675000 Sox17 978.0 187000 0.001226993865 0.000000000000 2.209248880021 1.200000000000
+chr1 4675000 4676000 Sox17 978.0 188000 0.001022494888 0.000000000000 1.821350457987 1.000000000000
+chr1 4676000 4677000 Sox17 978.0 189000 0.000817995910 1.000000000000 1.584151329559 0.800000000000
+chr1 4677000 4678000 Sox17 978.0 190000 0.001022494888 0.000000000000 1.991769215618 1.000000000000
+chr1 4678000 4679000 Sox17 978.0 191000 0.001226993865 0.000000000000 2.270616904920 1.200000000000
+chr1 4679000 4680000 Sox17 978.0 192000 0.000817995910 1.000000000000 1.497110047078 0.800000000000
+chr1 4680000 4681000 Sox17 978.0 193000 0.001022494888 0.000000000000 2.027336523322 1.000000000000
+chr1 4681000 4682000 Sox17 978.0 194000 0.000817995910 1.000000000000 1.574994385387 0.800000000000
+chr1 4682000 4683000 Sox17 978.0 195000 0.000613496933 1.000000000000 1.253714856445 0.600000000000
+chr1 4683000 4684000 Sox17 978.0 196000 0.000204498978 1.000000000000 0.417904952148 0.200000000000
+chr1 4684000 4685000 Sox17 978.0 197000 0.001022494888 0.000000000000 1.935184862473 1.000000000000
+chr1 4685000 4686000 Sox17 978.0 198000 0.000817995910 1.000000000000 1.335657003912 0.800000000000
+chr1 4686000 4687000 Sox17 978.0 199000 0.001022494888 0.000000000000 1.783206992633 1.000000000000
+chr1 4687000 4688000 Sox17 978.0 200000 0.001363326517 0.000000000000 2.316956024029 1.333333333333
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_3/FL-E13-5_chr1_chr1_14300280_14300280_Eya1.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_3/FL-E13-5_chr1_chr1_14300280_14300280_Eya1.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.6
+# FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 14100000 14101000 Eya1 673.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14101000 14102000 Eya1 673.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14102000 14103000 Eya1 673.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14103000 14104000 Eya1 673.0 -197000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14104000 14105000 Eya1 673.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14105000 14106000 Eya1 673.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14106000 14107000 Eya1 673.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14107000 14108000 Eya1 673.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14108000 14109000 Eya1 673.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14109000 14110000 Eya1 673.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14110000 14111000 Eya1 673.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14111000 14112000 Eya1 673.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14112000 14113000 Eya1 673.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14113000 14114000 Eya1 673.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14114000 14115000 Eya1 673.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14115000 14116000 Eya1 673.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14116000 14117000 Eya1 673.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14117000 14118000 Eya1 673.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14118000 14119000 Eya1 673.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14119000 14120000 Eya1 673.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14120000 14121000 Eya1 673.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14121000 14122000 Eya1 673.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14122000 14123000 Eya1 673.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14123000 14124000 Eya1 673.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14124000 14125000 Eya1 673.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14125000 14126000 Eya1 673.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14126000 14127000 Eya1 673.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14127000 14128000 Eya1 673.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14128000 14129000 Eya1 673.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14129000 14130000 Eya1 673.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14130000 14131000 Eya1 673.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14131000 14132000 Eya1 673.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14132000 14133000 Eya1 673.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14133000 14134000 Eya1 673.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14134000 14135000 Eya1 673.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14135000 14136000 Eya1 673.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14136000 14137000 Eya1 673.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14137000 14138000 Eya1 673.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14138000 14139000 Eya1 673.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14139000 14140000 Eya1 673.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14140000 14141000 Eya1 673.0 -160000 0.000891530461 0.232516348110 2.088887205761 0.600000000000
+chr1 14141000 14142000 Eya1 673.0 -159000 0.000891530461 0.232516348110 2.274191716551 0.600000000000
+chr1 14142000 14143000 Eya1 673.0 -158000 0.000891530461 0.232516348110 2.043476610792 0.600000000000
+chr1 14143000 14144000 Eya1 673.0 -157000 0.000891530461 0.232516348110 2.303919713268 0.600000000000
+chr1 14144000 14145000 Eya1 673.0 -156000 0.000891530461 0.232516348110 2.431032520312 0.600000000000
+chr1 14145000 14146000 Eya1 673.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14146000 14147000 Eya1 673.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14147000 14148000 Eya1 673.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14148000 14149000 Eya1 673.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14149000 14150000 Eya1 673.0 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14150000 14151000 Eya1 673.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14151000 14152000 Eya1 673.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14152000 14153000 Eya1 673.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14153000 14154000 Eya1 673.0 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14154000 14155000 Eya1 673.0 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14155000 14156000 Eya1 673.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14156000 14157000 Eya1 673.0 -144000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14157000 14158000 Eya1 673.0 -143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14158000 14159000 Eya1 673.0 -142000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14159000 14160000 Eya1 673.0 -141000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14160000 14161000 Eya1 673.0 -140000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14161000 14162000 Eya1 673.0 -139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14162000 14163000 Eya1 673.0 -138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14163000 14164000 Eya1 673.0 -137000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14164000 14165000 Eya1 673.0 -136000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14165000 14166000 Eya1 673.0 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14166000 14167000 Eya1 673.0 -134000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14167000 14168000 Eya1 673.0 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14168000 14169000 Eya1 673.0 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14169000 14170000 Eya1 673.0 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14170000 14171000 Eya1 673.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14171000 14172000 Eya1 673.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14172000 14173000 Eya1 673.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14173000 14174000 Eya1 673.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14174000 14175000 Eya1 673.0 -126000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14175000 14176000 Eya1 673.0 -125000 0.000297176820 0.378306706409 0.499656661362 0.200000000000
+chr1 14176000 14177000 Eya1 673.0 -124000 0.000297176820 0.378306706409 0.415222227347 0.200000000000
+chr1 14177000 14178000 Eya1 673.0 -123000 0.000297176820 0.378306706409 0.393070172785 0.200000000000
+chr1 14178000 14179000 Eya1 673.0 -122000 0.000297176820 0.378306706409 0.455520574435 0.200000000000
+chr1 14179000 14180000 Eya1 673.0 -121000 0.000297176820 0.378306706409 0.450727149836 0.200000000000
+chr1 14180000 14181000 Eya1 673.0 -120000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14181000 14182000 Eya1 673.0 -119000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14182000 14183000 Eya1 673.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14183000 14184000 Eya1 673.0 -117000 0.000297176820 0.378306706409 0.529790233372 0.200000000000
+chr1 14184000 14185000 Eya1 673.0 -116000 0.000297176820 0.378306706409 0.473481099396 0.200000000000
+chr1 14185000 14186000 Eya1 673.0 -115000 0.000297176820 0.378306706409 0.468660590867 0.200000000000
+chr1 14186000 14187000 Eya1 673.0 -114000 0.000297176820 0.378306706409 0.456587367046 0.200000000000
+chr1 14187000 14188000 Eya1 673.0 -113000 0.000297176820 0.378306706409 0.454787754802 0.200000000000
+chr1 14188000 14189000 Eya1 673.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14189000 14190000 Eya1 673.0 -111000 0.000297176820 0.378306706409 0.505375936152 0.200000000000
+chr1 14190000 14191000 Eya1 673.0 -110000 0.000297176820 0.378306706409 0.615627326013 0.200000000000
+chr1 14191000 14192000 Eya1 673.0 -109000 0.000297176820 0.378306706409 0.515116742893 0.200000000000
+chr1 14192000 14193000 Eya1 673.0 -108000 0.000297176820 0.378306706409 0.518874225194 0.200000000000
+chr1 14193000 14194000 Eya1 673.0 -107000 0.000297176820 0.378306706409 0.493209478897 0.200000000000
+chr1 14194000 14195000 Eya1 673.0 -106000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14195000 14196000 Eya1 673.0 -105000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14196000 14197000 Eya1 673.0 -104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14197000 14198000 Eya1 673.0 -103000 0.001188707281 0.177992691518 2.956872299965 0.800000000000
+chr1 14198000 14199000 Eya1 673.0 -102000 0.001188707281 0.177992691518 3.288063194467 0.800000000000
+chr1 14199000 14200000 Eya1 673.0 -101000 0.001188707281 0.177992691518 2.867100083177 0.800000000000
+chr1 14200000 14201000 Eya1 673.0 -100000 0.001188707281 0.177992691518 2.922722837730 0.800000000000
+chr1 14201000 14202000 Eya1 673.0 -99000 0.001188707281 0.177992691518 3.006731581888 0.800000000000
+chr1 14202000 14203000 Eya1 673.0 -98000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14203000 14204000 Eya1 673.0 -97000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14204000 14205000 Eya1 673.0 -96000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14205000 14206000 Eya1 673.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14206000 14207000 Eya1 673.0 -94000 0.000594353640 0.299067125362 0.951966824636 0.400000000000
+chr1 14207000 14208000 Eya1 673.0 -93000 0.000594353640 0.299067125362 0.942355129306 0.400000000000
+chr1 14208000 14209000 Eya1 673.0 -92000 0.000594353640 0.299067125362 0.653979419394 0.400000000000
+chr1 14209000 14210000 Eya1 673.0 -91000 0.000594353640 0.299067125362 0.616511848749 0.400000000000
+chr1 14210000 14211000 Eya1 673.0 -90000 0.000594353640 0.299067125362 0.610156056253 0.400000000000
+chr1 14211000 14212000 Eya1 673.0 -89000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14212000 14213000 Eya1 673.0 -88000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14213000 14214000 Eya1 673.0 -87000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14214000 14215000 Eya1 673.0 -86000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14217000 14218000 Eya1 673.0 -83000 0.000594353640 0.299067125362 0.722084465625 0.400000000000
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+chr1 14219000 14220000 Eya1 673.0 -81000 0.000594353640 0.299067125362 0.766564111695 0.400000000000
+chr1 14220000 14221000 Eya1 673.0 -80000 0.000594353640 0.299067125362 0.777777150044 0.400000000000
+chr1 14221000 14222000 Eya1 673.0 -79000 0.000594353640 0.299067125362 0.895237372699 0.400000000000
+chr1 14222000 14223000 Eya1 673.0 -78000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14246000 14247000 Eya1 673.0 -54000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14462000 14463000 Eya1 673.0 162000 0.001188707281 1.000000000000 1.591533108618 0.800000000000
+chr1 14463000 14464000 Eya1 673.0 163000 0.000594353640 1.000000000000 0.780082358626 0.400000000000
+chr1 14464000 14465000 Eya1 673.0 164000 0.000594353640 1.000000000000 0.813852157891 0.400000000000
+chr1 14465000 14466000 Eya1 673.0 165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14466000 14467000 Eya1 673.0 166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14467000 14468000 Eya1 673.0 167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14468000 14469000 Eya1 673.0 168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14469000 14470000 Eya1 673.0 169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14470000 14471000 Eya1 673.0 170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14471000 14472000 Eya1 673.0 171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14472000 14473000 Eya1 673.0 172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14473000 14474000 Eya1 673.0 173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14474000 14475000 Eya1 673.0 174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14475000 14476000 Eya1 673.0 175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14476000 14477000 Eya1 673.0 176000 0.000297176820 1.000000000000 0.377777473345 0.200000000000
+chr1 14477000 14478000 Eya1 673.0 177000 0.000297176820 1.000000000000 0.387710125250 0.200000000000
+chr1 14478000 14479000 Eya1 673.0 178000 0.000594353640 1.000000000000 0.804681391196 0.400000000000
+chr1 14479000 14480000 Eya1 673.0 179000 0.000594353640 1.000000000000 0.853631790099 0.400000000000
+chr1 14480000 14481000 Eya1 673.0 180000 0.001485884101 1.000000000000 2.209060071856 1.000000000000
+chr1 14481000 14482000 Eya1 673.0 181000 0.001188707281 1.000000000000 1.740739337114 0.800000000000
+chr1 14482000 14483000 Eya1 673.0 182000 0.001188707281 1.000000000000 1.946633238000 0.800000000000
+chr1 14483000 14484000 Eya1 673.0 183000 0.001783060921 1.000000000000 2.611109005672 1.200000000000
+chr1 14484000 14485000 Eya1 673.0 184000 0.002080237741 1.000000000000 3.150313631272 1.400000000000
+chr1 14485000 14486000 Eya1 673.0 185000 0.001188707281 1.000000000000 1.707263580199 0.800000000000
+chr1 14486000 14487000 Eya1 673.0 186000 0.001188707281 1.000000000000 1.814813352082 0.800000000000
+chr1 14487000 14488000 Eya1 673.0 187000 0.001188707281 1.000000000000 1.806605148755 0.800000000000
+chr1 14488000 14489000 Eya1 673.0 188000 0.000594353640 1.000000000000 0.912259118375 0.400000000000
+chr1 14489000 14490000 Eya1 673.0 189000 0.000297176820 1.000000000000 0.475667144687 0.200000000000
+chr1 14490000 14491000 Eya1 673.0 190000 0.000297176820 1.000000000000 0.488628585681 0.200000000000
+chr1 14491000 14492000 Eya1 673.0 191000 0.002080237741 1.000000000000 3.452466352281 1.400000000000
+chr1 14492000 14493000 Eya1 673.0 192000 0.003268945022 1.000000000000 5.155266499539 2.200000000000
+chr1 14493000 14494000 Eya1 673.0 193000 0.002971768202 1.000000000000 4.559079214345 2.000000000000
+chr1 14494000 14495000 Eya1 673.0 194000 0.003268945022 1.000000000000 5.423459548891 2.200000000000
+chr1 14495000 14496000 Eya1 673.0 195000 0.003268945022 1.000000000000 5.638713926662 2.200000000000
+chr1 14496000 14497000 Eya1 673.0 196000 0.002971768202 1.000000000000 5.019309740274 2.000000000000
+chr1 14497000 14498000 Eya1 673.0 197000 0.002080237741 1.000000000000 3.323229640928 1.400000000000
+chr1 14498000 14499000 Eya1 673.0 198000 0.002971768202 1.000000000000 4.181187622141 2.000000000000
+chr1 14499000 14500000 Eya1 673.0 199000 0.003343239227 1.000000000000 4.818931539295 2.250000000000
+chr1 14500000 14501000 Eya1 673.0 200000 0.004457652303 1.000000000000 6.794212212290 3.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_3/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_3/FL-E13-5_chr1_chr1_19093103_19093103_Tfap2d.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.4.3
+# FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 18893000 18894000 Tfap2d 472.0 -200000 0.001412429379 0.009736859396 8.554173074049 0.666666666667
+chr1 18894000 18895000 Tfap2d 472.0 -199000 0.001059322034 0.016726462474 5.040852007510 0.500000000000
+chr1 18895000 18896000 Tfap2d 472.0 -198000 0.000847457627 0.023000625561 3.282415254892 0.400000000000
+chr1 18896000 18897000 Tfap2d 472.0 -197000 0.000847457627 0.023000625561 3.136530131373 0.400000000000
+chr1 18897000 18898000 Tfap2d 472.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18898000 18899000 Tfap2d 472.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18899000 18900000 Tfap2d 472.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18900000 18901000 Tfap2d 472.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18901000 18902000 Tfap2d 472.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18902000 18903000 Tfap2d 472.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18903000 18904000 Tfap2d 472.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18904000 18905000 Tfap2d 472.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18905000 18906000 Tfap2d 472.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18906000 18907000 Tfap2d 472.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18907000 18908000 Tfap2d 472.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18908000 18909000 Tfap2d 472.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18909000 18910000 Tfap2d 472.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18910000 18911000 Tfap2d 472.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18911000 18912000 Tfap2d 472.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18912000 18913000 Tfap2d 472.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18913000 18914000 Tfap2d 472.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18914000 18915000 Tfap2d 472.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18915000 18916000 Tfap2d 472.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18916000 18917000 Tfap2d 472.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18917000 18918000 Tfap2d 472.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18918000 18919000 Tfap2d 472.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18919000 18920000 Tfap2d 472.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18920000 18921000 Tfap2d 472.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18921000 18922000 Tfap2d 472.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18922000 18923000 Tfap2d 472.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18923000 18924000 Tfap2d 472.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18924000 18925000 Tfap2d 472.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18925000 18926000 Tfap2d 472.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18926000 18927000 Tfap2d 472.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18927000 18928000 Tfap2d 472.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18928000 18929000 Tfap2d 472.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18929000 18930000 Tfap2d 472.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18930000 18931000 Tfap2d 472.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18931000 18932000 Tfap2d 472.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18932000 18933000 Tfap2d 472.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18933000 18934000 Tfap2d 472.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18934000 18935000 Tfap2d 472.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18935000 18936000 Tfap2d 472.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18936000 18937000 Tfap2d 472.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18937000 18938000 Tfap2d 472.0 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18938000 18939000 Tfap2d 472.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18939000 18940000 Tfap2d 472.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18940000 18941000 Tfap2d 472.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18941000 18942000 Tfap2d 472.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18942000 18943000 Tfap2d 472.0 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18943000 18944000 Tfap2d 472.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18944000 18945000 Tfap2d 472.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18945000 18946000 Tfap2d 472.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18946000 18947000 Tfap2d 472.0 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18947000 18948000 Tfap2d 472.0 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18948000 18949000 Tfap2d 472.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18949000 18950000 Tfap2d 472.0 -144000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18950000 18951000 Tfap2d 472.0 -143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18951000 18952000 Tfap2d 472.0 -142000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18952000 18953000 Tfap2d 472.0 -141000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18953000 18954000 Tfap2d 472.0 -140000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18954000 18955000 Tfap2d 472.0 -139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18955000 18956000 Tfap2d 472.0 -138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18956000 18957000 Tfap2d 472.0 -137000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18957000 18958000 Tfap2d 472.0 -136000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18958000 18959000 Tfap2d 472.0 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18959000 18960000 Tfap2d 472.0 -134000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18960000 18961000 Tfap2d 472.0 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18961000 18962000 Tfap2d 472.0 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18962000 18963000 Tfap2d 472.0 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18963000 18964000 Tfap2d 472.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18964000 18965000 Tfap2d 472.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18965000 18966000 Tfap2d 472.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18966000 18967000 Tfap2d 472.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18967000 18968000 Tfap2d 472.0 -126000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18968000 18969000 Tfap2d 472.0 -125000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18969000 18970000 Tfap2d 472.0 -124000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18970000 18971000 Tfap2d 472.0 -123000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18971000 18972000 Tfap2d 472.0 -122000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18972000 18973000 Tfap2d 472.0 -121000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18973000 18974000 Tfap2d 472.0 -120000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18974000 18975000 Tfap2d 472.0 -119000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18975000 18976000 Tfap2d 472.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18976000 18977000 Tfap2d 472.0 -117000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18977000 18978000 Tfap2d 472.0 -116000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18978000 18979000 Tfap2d 472.0 -115000 0.001271186441 0.012107544045 3.257165906583 0.600000000000
+chr1 18979000 18980000 Tfap2d 472.0 -114000 0.001271186441 0.012107544045 3.470750557945 0.600000000000
+chr1 18980000 18981000 Tfap2d 472.0 -113000 0.001271186441 0.012107544045 3.814698814531 0.600000000000
+chr1 18981000 18982000 Tfap2d 472.0 -112000 0.001271186441 0.012107544045 4.602517039860 0.600000000000
+chr1 18982000 18983000 Tfap2d 472.0 -111000 0.001271186441 0.012107544045 4.553027608970 0.600000000000
+chr1 18983000 18984000 Tfap2d 472.0 -110000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18984000 18985000 Tfap2d 472.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18985000 18986000 Tfap2d 472.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18986000 18987000 Tfap2d 472.0 -107000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18987000 18988000 Tfap2d 472.0 -106000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18988000 18989000 Tfap2d 472.0 -105000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18989000 18990000 Tfap2d 472.0 -104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18990000 18991000 Tfap2d 472.0 -103000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18991000 18992000 Tfap2d 472.0 -102000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18992000 18993000 Tfap2d 472.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18993000 18994000 Tfap2d 472.0 -100000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18994000 18995000 Tfap2d 472.0 -99000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18995000 18996000 Tfap2d 472.0 -98000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18996000 18997000 Tfap2d 472.0 -97000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18997000 18998000 Tfap2d 472.0 -96000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18998000 18999000 Tfap2d 472.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18999000 19000000 Tfap2d 472.0 -94000 0.000423728814 0.042850447268 1.102686374757 0.200000000000
+chr1 19000000 19001000 Tfap2d 472.0 -93000 0.000423728814 0.042850447268 1.061231999455 0.200000000000
+chr1 19001000 19002000 Tfap2d 472.0 -92000 0.000423728814 0.042850447268 0.779800308873 0.200000000000
+chr1 19002000 19003000 Tfap2d 472.0 -91000 0.000423728814 0.042850447268 0.735124249200 0.200000000000
+chr1 19003000 19004000 Tfap2d 472.0 -90000 0.000423728814 0.042850447268 0.727545648641 0.200000000000
+chr1 19004000 19005000 Tfap2d 472.0 -89000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19005000 19006000 Tfap2d 472.0 -88000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19006000 19007000 Tfap2d 472.0 -87000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19007000 19008000 Tfap2d 472.0 -86000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19008000 19009000 Tfap2d 472.0 -85000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19009000 19010000 Tfap2d 472.0 -84000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19010000 19011000 Tfap2d 472.0 -83000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19011000 19012000 Tfap2d 472.0 -82000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19012000 19013000 Tfap2d 472.0 -81000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19013000 19014000 Tfap2d 472.0 -80000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19014000 19015000 Tfap2d 472.0 -79000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19015000 19016000 Tfap2d 472.0 -78000 0.000423728814 0.042850447268 1.238104000914 0.200000000000
+chr1 19016000 19017000 Tfap2d 472.0 -77000 0.000423728814 0.042850447268 0.980165665600 0.200000000000
+chr1 19017000 19018000 Tfap2d 472.0 -76000 0.000423728814 0.042850447268 0.934727521861 0.200000000000
+chr1 19018000 19019000 Tfap2d 472.0 -75000 0.000423728814 0.042850447268 1.022781564413 0.200000000000
+chr1 19019000 19020000 Tfap2d 472.0 -74000 0.000423728814 0.042850447268 1.001020254378 0.200000000000
+chr1 19020000 19021000 Tfap2d 472.0 -73000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19021000 19022000 Tfap2d 472.0 -72000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19022000 19023000 Tfap2d 472.0 -71000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19023000 19024000 Tfap2d 472.0 -70000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19024000 19025000 Tfap2d 472.0 -69000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19025000 19026000 Tfap2d 472.0 -68000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19026000 19027000 Tfap2d 472.0 -67000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19027000 19028000 Tfap2d 472.0 -66000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19028000 19029000 Tfap2d 472.0 -65000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19029000 19030000 Tfap2d 472.0 -64000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19030000 19031000 Tfap2d 472.0 -63000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19031000 19032000 Tfap2d 472.0 -62000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19032000 19033000 Tfap2d 472.0 -61000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19033000 19034000 Tfap2d 472.0 -60000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19034000 19035000 Tfap2d 472.0 -59000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19035000 19036000 Tfap2d 472.0 -58000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19036000 19037000 Tfap2d 472.0 -57000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19037000 19038000 Tfap2d 472.0 -56000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19038000 19039000 Tfap2d 472.0 -55000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19039000 19040000 Tfap2d 472.0 -54000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19040000 19041000 Tfap2d 472.0 -53000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19041000 19042000 Tfap2d 472.0 -52000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19042000 19043000 Tfap2d 472.0 -51000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19043000 19044000 Tfap2d 472.0 -50000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19044000 19045000 Tfap2d 472.0 -49000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19045000 19046000 Tfap2d 472.0 -48000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19046000 19047000 Tfap2d 472.0 -47000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19047000 19048000 Tfap2d 472.0 -46000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19048000 19049000 Tfap2d 472.0 -45000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19049000 19050000 Tfap2d 472.0 -44000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19050000 19051000 Tfap2d 472.0 -43000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19051000 19052000 Tfap2d 472.0 -42000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 19248000 19249000 Tfap2d 472.0 155000 0.001694915254 0.000000000000 2.498121343489 0.800000000000
+chr1 19249000 19250000 Tfap2d 472.0 156000 0.000847457627 0.000000000000 1.249060671745 0.400000000000
+chr1 19250000 19251000 Tfap2d 472.0 157000 0.000847457627 0.000000000000 1.171318305746 0.400000000000
+chr1 19251000 19252000 Tfap2d 472.0 158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19252000 19253000 Tfap2d 472.0 159000 0.000847457627 0.000000000000 1.098395766262 0.400000000000
+chr1 19253000 19254000 Tfap2d 472.0 160000 0.000847457627 0.000000000000 1.081562114542 0.400000000000
+chr1 19254000 19255000 Tfap2d 472.0 161000 0.001694915254 0.000000000000 2.038178424337 0.800000000000
+chr1 19255000 19256000 Tfap2d 472.0 162000 0.001694915254 0.000000000000 2.304389486014 0.800000000000
+chr1 19256000 19257000 Tfap2d 472.0 163000 0.002542372881 0.000000000000 3.513954917238 1.200000000000
+chr1 19257000 19258000 Tfap2d 472.0 164000 0.002118644068 0.000000000000 3.055061815685 1.000000000000
+chr1 19258000 19259000 Tfap2d 472.0 165000 0.002118644068 0.000000000000 3.252162579500 1.000000000000
+chr1 19259000 19260000 Tfap2d 472.0 166000 0.001694915254 0.000000000000 2.822877120847 0.800000000000
+chr1 19260000 19261000 Tfap2d 472.0 167000 0.001694915254 0.000000000000 2.701317818024 0.800000000000
+chr1 19261000 19262000 Tfap2d 472.0 168000 0.000847457627 0.000000000000 1.312966101957 0.400000000000
+chr1 19262000 19263000 Tfap2d 472.0 169000 0.000423728814 0.000000000000 0.593041411154 0.200000000000
+chr1 19263000 19264000 Tfap2d 472.0 170000 0.000423728814 0.000000000000 0.573755512251 0.200000000000
+chr1 19264000 19265000 Tfap2d 472.0 171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19265000 19266000 Tfap2d 472.0 172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19266000 19267000 Tfap2d 472.0 173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19267000 19268000 Tfap2d 472.0 174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19268000 19269000 Tfap2d 472.0 175000 0.000423728814 0.000000000000 0.608378689139 0.200000000000
+chr1 19269000 19270000 Tfap2d 472.0 176000 0.000423728814 0.000000000000 0.600612152627 0.200000000000
+chr1 19270000 19271000 Tfap2d 472.0 177000 0.000423728814 0.000000000000 0.641562981525 0.200000000000
+chr1 19271000 19272000 Tfap2d 472.0 178000 0.000423728814 0.000000000000 0.665772905546 0.200000000000
+chr1 19272000 19273000 Tfap2d 472.0 179000 0.000423728814 0.000000000000 0.678576230756 0.200000000000
+chr1 19273000 19274000 Tfap2d 472.0 180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19274000 19275000 Tfap2d 472.0 181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19275000 19276000 Tfap2d 472.0 182000 0.000423728814 0.000000000000 0.758837934828 0.200000000000
+chr1 19276000 19277000 Tfap2d 472.0 183000 0.000423728814 0.000000000000 0.735124249200 0.200000000000
+chr1 19277000 19278000 Tfap2d 472.0 184000 0.000423728814 0.000000000000 0.688506614701 0.200000000000
+chr1 19278000 19279000 Tfap2d 472.0 185000 0.000423728814 0.000000000000 0.678576230756 0.200000000000
+chr1 19279000 19280000 Tfap2d 472.0 186000 0.000423728814 0.000000000000 0.750765190784 0.200000000000
+chr1 19280000 19281000 Tfap2d 472.0 187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19281000 19282000 Tfap2d 472.0 188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19282000 19283000 Tfap2d 472.0 189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19283000 19284000 Tfap2d 472.0 190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19284000 19285000 Tfap2d 472.0 191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19285000 19286000 Tfap2d 472.0 192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19286000 19287000 Tfap2d 472.0 193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19287000 19288000 Tfap2d 472.0 194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19288000 19289000 Tfap2d 472.0 195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19289000 19290000 Tfap2d 472.0 196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19290000 19291000 Tfap2d 472.0 197000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19291000 19292000 Tfap2d 472.0 198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19292000 19293000 Tfap2d 472.0 199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19293000 19294000 Tfap2d 472.0 200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_3/FL-E13-5_chr1_chr1_4487435_4487435_Sox17.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_3/FL-E13-5_chr1_chr1_4487435_4487435_Sox17.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.6
+# FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 4287000 4288000 Sox17 810.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4288000 4289000 Sox17 810.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4289000 4290000 Sox17 810.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4290000 4291000 Sox17 810.0 -197000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4291000 4292000 Sox17 810.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4292000 4293000 Sox17 810.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4293000 4294000 Sox17 810.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4294000 4295000 Sox17 810.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4295000 4296000 Sox17 810.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4296000 4297000 Sox17 810.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4297000 4298000 Sox17 810.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4298000 4299000 Sox17 810.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4299000 4300000 Sox17 810.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4300000 4301000 Sox17 810.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4301000 4302000 Sox17 810.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4302000 4303000 Sox17 810.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4303000 4304000 Sox17 810.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4304000 4305000 Sox17 810.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4305000 4306000 Sox17 810.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4306000 4307000 Sox17 810.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4307000 4308000 Sox17 810.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4308000 4309000 Sox17 810.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4309000 4310000 Sox17 810.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4310000 4311000 Sox17 810.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4311000 4312000 Sox17 810.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4312000 4313000 Sox17 810.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4313000 4314000 Sox17 810.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4314000 4315000 Sox17 810.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4315000 4316000 Sox17 810.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4316000 4317000 Sox17 810.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4317000 4318000 Sox17 810.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4318000 4319000 Sox17 810.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4319000 4320000 Sox17 810.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4320000 4321000 Sox17 810.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4321000 4322000 Sox17 810.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4322000 4323000 Sox17 810.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4323000 4324000 Sox17 810.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4324000 4325000 Sox17 810.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4325000 4326000 Sox17 810.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4326000 4327000 Sox17 810.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4327000 4328000 Sox17 810.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4328000 4329000 Sox17 810.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4329000 4330000 Sox17 810.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4330000 4331000 Sox17 810.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4331000 4332000 Sox17 810.0 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4332000 4333000 Sox17 810.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4333000 4334000 Sox17 810.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4334000 4335000 Sox17 810.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4335000 4336000 Sox17 810.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4336000 4337000 Sox17 810.0 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4337000 4338000 Sox17 810.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4338000 4339000 Sox17 810.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4339000 4340000 Sox17 810.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4340000 4341000 Sox17 810.0 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4341000 4342000 Sox17 810.0 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4342000 4343000 Sox17 810.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4343000 4344000 Sox17 810.0 -144000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4344000 4345000 Sox17 810.0 -143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4345000 4346000 Sox17 810.0 -142000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4346000 4347000 Sox17 810.0 -141000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4347000 4348000 Sox17 810.0 -140000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4348000 4349000 Sox17 810.0 -139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4349000 4350000 Sox17 810.0 -138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4350000 4351000 Sox17 810.0 -137000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4351000 4352000 Sox17 810.0 -136000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4352000 4353000 Sox17 810.0 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4353000 4354000 Sox17 810.0 -134000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4354000 4355000 Sox17 810.0 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4355000 4356000 Sox17 810.0 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4356000 4357000 Sox17 810.0 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4357000 4358000 Sox17 810.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4358000 4359000 Sox17 810.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4359000 4360000 Sox17 810.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4360000 4361000 Sox17 810.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4361000 4362000 Sox17 810.0 -126000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4362000 4363000 Sox17 810.0 -125000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4363000 4364000 Sox17 810.0 -124000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4364000 4365000 Sox17 810.0 -123000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4365000 4366000 Sox17 810.0 -122000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4366000 4367000 Sox17 810.0 -121000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4367000 4368000 Sox17 810.0 -120000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4368000 4369000 Sox17 810.0 -119000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4369000 4370000 Sox17 810.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4370000 4371000 Sox17 810.0 -117000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4371000 4372000 Sox17 810.0 -116000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4372000 4373000 Sox17 810.0 -115000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4373000 4374000 Sox17 810.0 -114000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4374000 4375000 Sox17 810.0 -113000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4375000 4376000 Sox17 810.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4376000 4377000 Sox17 810.0 -111000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4377000 4378000 Sox17 810.0 -110000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4378000 4379000 Sox17 810.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4379000 4380000 Sox17 810.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4380000 4381000 Sox17 810.0 -107000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4381000 4382000 Sox17 810.0 -106000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4382000 4383000 Sox17 810.0 -105000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4383000 4384000 Sox17 810.0 -104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4384000 4385000 Sox17 810.0 -103000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4385000 4386000 Sox17 810.0 -102000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4386000 4387000 Sox17 810.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4387000 4388000 Sox17 810.0 -100000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4388000 4389000 Sox17 810.0 -99000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4389000 4390000 Sox17 810.0 -98000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4390000 4391000 Sox17 810.0 -97000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4391000 4392000 Sox17 810.0 -96000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4392000 4393000 Sox17 810.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4393000 4394000 Sox17 810.0 -94000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4394000 4395000 Sox17 810.0 -93000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4395000 4396000 Sox17 810.0 -92000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4396000 4397000 Sox17 810.0 -91000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4397000 4398000 Sox17 810.0 -90000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4398000 4399000 Sox17 810.0 -89000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4399000 4400000 Sox17 810.0 -88000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4400000 4401000 Sox17 810.0 -87000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4401000 4402000 Sox17 810.0 -86000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4402000 4403000 Sox17 810.0 -85000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4403000 4404000 Sox17 810.0 -84000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4404000 4405000 Sox17 810.0 -83000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4405000 4406000 Sox17 810.0 -82000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4406000 4407000 Sox17 810.0 -81000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4407000 4408000 Sox17 810.0 -80000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4408000 4409000 Sox17 810.0 -79000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4409000 4410000 Sox17 810.0 -78000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4410000 4411000 Sox17 810.0 -77000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4411000 4412000 Sox17 810.0 -76000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4412000 4413000 Sox17 810.0 -75000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4413000 4414000 Sox17 810.0 -74000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4414000 4415000 Sox17 810.0 -73000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4415000 4416000 Sox17 810.0 -72000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4416000 4417000 Sox17 810.0 -71000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4417000 4418000 Sox17 810.0 -70000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4418000 4419000 Sox17 810.0 -69000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4419000 4420000 Sox17 810.0 -68000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4420000 4421000 Sox17 810.0 -67000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4421000 4422000 Sox17 810.0 -66000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4422000 4423000 Sox17 810.0 -65000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4423000 4424000 Sox17 810.0 -64000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4424000 4425000 Sox17 810.0 -63000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4425000 4426000 Sox17 810.0 -62000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4426000 4427000 Sox17 810.0 -61000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4427000 4428000 Sox17 810.0 -60000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4428000 4429000 Sox17 810.0 -59000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4429000 4430000 Sox17 810.0 -58000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4430000 4431000 Sox17 810.0 -57000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4431000 4432000 Sox17 810.0 -56000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4432000 4433000 Sox17 810.0 -55000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4433000 4434000 Sox17 810.0 -54000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4434000 4435000 Sox17 810.0 -53000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4435000 4436000 Sox17 810.0 -52000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4436000 4437000 Sox17 810.0 -51000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4437000 4438000 Sox17 810.0 -50000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4438000 4439000 Sox17 810.0 -49000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4439000 4440000 Sox17 810.0 -48000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4440000 4441000 Sox17 810.0 -47000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4441000 4442000 Sox17 810.0 -46000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4442000 4443000 Sox17 810.0 -45000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4443000 4444000 Sox17 810.0 -44000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4444000 4445000 Sox17 810.0 -43000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4445000 4446000 Sox17 810.0 -42000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4446000 4447000 Sox17 810.0 -41000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4447000 4448000 Sox17 810.0 -40000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4448000 4449000 Sox17 810.0 -39000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4449000 4450000 Sox17 810.0 -38000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4450000 4451000 Sox17 810.0 -37000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4451000 4452000 Sox17 810.0 -36000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4452000 4453000 Sox17 810.0 -35000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4453000 4454000 Sox17 810.0 -34000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4660000 4661000 Sox17 810.0 173000 0.000493827160 1.000000000000 0.614969855182 0.400000000000
+chr1 4661000 4662000 Sox17 810.0 174000 0.000246913580 1.000000000000 0.301316248499 0.200000000000
+chr1 4662000 4663000 Sox17 810.0 175000 0.000246913580 1.000000000000 0.317940593070 0.200000000000
+chr1 4663000 4664000 Sox17 810.0 176000 0.000246913580 1.000000000000 0.313881777236 0.200000000000
+chr1 4664000 4665000 Sox17 810.0 177000 0.000246913580 1.000000000000 0.322134462090 0.200000000000
+chr1 4665000 4666000 Sox17 810.0 178000 0.000493827160 1.000000000000 0.668580958364 0.400000000000
+chr1 4666000 4667000 Sox17 810.0 179000 0.000246913580 1.000000000000 0.354626046134 0.200000000000
+chr1 4667000 4668000 Sox17 810.0 180000 0.000246913580 1.000000000000 0.367085784780 0.200000000000
+chr1 4668000 4669000 Sox17 810.0 181000 0.000246913580 1.000000000000 0.361579498110 0.200000000000
+chr1 4669000 4670000 Sox17 810.0 182000 0.000246913580 1.000000000000 0.404346965794 0.200000000000
+chr1 4670000 4671000 Sox17 810.0 183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4671000 4672000 Sox17 810.0 184000 0.000246913580 1.000000000000 0.373926115317 0.200000000000
+chr1 4672000 4673000 Sox17 810.0 185000 0.000246913580 1.000000000000 0.354626046134 0.200000000000
+chr1 4673000 4674000 Sox17 810.0 186000 0.000246913580 1.000000000000 0.376965859861 0.200000000000
+chr1 4674000 4675000 Sox17 810.0 187000 0.000246913580 1.000000000000 0.375260884294 0.200000000000
+chr1 4675000 4676000 Sox17 810.0 188000 0.000493827160 1.000000000000 0.757963440329 0.400000000000
+chr1 4676000 4677000 Sox17 810.0 189000 0.000246913580 1.000000000000 0.395214800462 0.200000000000
+chr1 4677000 4678000 Sox17 810.0 190000 0.000246913580 1.000000000000 0.405983997732 0.200000000000
+chr1 4678000 4679000 Sox17 810.0 191000 0.000740740741 1.000000000000 1.229370293696 0.600000000000
+chr1 4679000 4680000 Sox17 810.0 192000 0.000740740741 1.000000000000 1.168179917236 0.600000000000
+chr1 4680000 4681000 Sox17 810.0 193000 0.000740740741 1.000000000000 1.136392707872 0.600000000000
+chr1 4681000 4682000 Sox17 810.0 194000 0.000740740741 1.000000000000 1.228952281617 0.600000000000
+chr1 4682000 4683000 Sox17 810.0 195000 0.000740740741 1.000000000000 1.277728778668 0.600000000000
+chr1 4683000 4684000 Sox17 810.0 196000 0.000493827160 1.000000000000 0.834072951902 0.400000000000
+chr1 4684000 4685000 Sox17 810.0 197000 0.000493827160 1.000000000000 0.788900722520 0.400000000000
+chr1 4685000 4686000 Sox17 810.0 198000 0.000246913580 1.000000000000 0.347399909840 0.200000000000
+chr1 4686000 4687000 Sox17 810.0 199000 0.000308641975 1.000000000000 0.444875298484 0.250000000000
+chr1 4687000 4688000 Sox17 810.0 200000 0.000411522634 1.000000000000 0.627229741958 0.333333333333
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_3/MB-E10-5_chr1_chr1_14300280_14300280_Eya1.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_3/MB-E10-5_chr1_chr1_14300280_14300280_Eya1.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.4.3
+# MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 14100000 14101000 Eya1 832.0 -200000 0.000400641026 0.028365821799 2.426424093120 0.333333333333
+chr1 14101000 14102000 Eya1 832.0 -199000 0.000300480769 0.036748857670 1.429857059822 0.250000000000
+chr1 14102000 14103000 Eya1 832.0 -198000 0.000240384615 0.042850447268 0.931069711724 0.200000000000
+chr1 14103000 14104000 Eya1 832.0 -197000 0.000240384615 0.042850447268 0.889688835341 0.200000000000
+chr1 14104000 14105000 Eya1 832.0 -196000 0.000240384615 0.042850447268 0.976487746811 0.200000000000
+chr1 14105000 14106000 Eya1 832.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14106000 14107000 Eya1 832.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14107000 14108000 Eya1 832.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14108000 14109000 Eya1 832.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14109000 14110000 Eya1 832.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14110000 14111000 Eya1 832.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14111000 14112000 Eya1 832.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14112000 14113000 Eya1 832.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14113000 14114000 Eya1 832.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14114000 14115000 Eya1 832.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14115000 14116000 Eya1 832.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14116000 14117000 Eya1 832.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14117000 14118000 Eya1 832.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14118000 14119000 Eya1 832.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14119000 14120000 Eya1 832.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14120000 14121000 Eya1 832.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14121000 14122000 Eya1 832.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14122000 14123000 Eya1 832.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14123000 14124000 Eya1 832.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14124000 14125000 Eya1 832.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14125000 14126000 Eya1 832.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14126000 14127000 Eya1 832.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14127000 14128000 Eya1 832.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14128000 14129000 Eya1 832.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14129000 14130000 Eya1 832.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14130000 14131000 Eya1 832.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14131000 14132000 Eya1 832.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14132000 14133000 Eya1 832.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14133000 14134000 Eya1 832.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14134000 14135000 Eya1 832.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14135000 14136000 Eya1 832.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14136000 14137000 Eya1 832.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14137000 14138000 Eya1 832.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14138000 14139000 Eya1 832.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14165000 14166000 Eya1 832.0 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14167000 14168000 Eya1 832.0 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14168000 14169000 Eya1 832.0 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14169000 14170000 Eya1 832.0 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14170000 14171000 Eya1 832.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14171000 14172000 Eya1 832.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14172000 14173000 Eya1 832.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14173000 14174000 Eya1 832.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14174000 14175000 Eya1 832.0 -126000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14175000 14176000 Eya1 832.0 -125000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14176000 14177000 Eya1 832.0 -124000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14177000 14178000 Eya1 832.0 -123000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14178000 14179000 Eya1 832.0 -122000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14179000 14180000 Eya1 832.0 -121000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14180000 14181000 Eya1 832.0 -120000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14181000 14182000 Eya1 832.0 -119000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14182000 14183000 Eya1 832.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14183000 14184000 Eya1 832.0 -117000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14184000 14185000 Eya1 832.0 -116000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14185000 14186000 Eya1 832.0 -115000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14186000 14187000 Eya1 832.0 -114000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14187000 14188000 Eya1 832.0 -113000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14188000 14189000 Eya1 832.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14191000 14192000 Eya1 832.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14200000 14201000 Eya1 832.0 -100000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 14469000 14470000 Eya1 832.0 169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14470000 14471000 Eya1 832.0 170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14471000 14472000 Eya1 832.0 171000 0.000480769231 0.000000000000 0.659028767461 0.400000000000
+chr1 14472000 14473000 Eya1 832.0 172000 0.000480769231 0.000000000000 0.618316565296 0.400000000000
+chr1 14473000 14474000 Eya1 832.0 173000 0.000480769231 0.000000000000 0.630488151323 0.400000000000
+chr1 14474000 14475000 Eya1 832.0 174000 0.000480769231 0.000000000000 0.667266626197 0.400000000000
+chr1 14475000 14476000 Eya1 832.0 175000 0.000480769231 0.000000000000 0.690275820369 0.400000000000
+chr1 14476000 14477000 Eya1 832.0 176000 0.000240384615 0.000000000000 0.340731894279 0.200000000000
+chr1 14477000 14478000 Eya1 832.0 177000 0.000480769231 0.000000000000 0.727927229038 0.400000000000
+chr1 14478000 14479000 Eya1 832.0 178000 0.000480769231 0.000000000000 0.755396181293 0.400000000000
+chr1 14479000 14480000 Eya1 832.0 179000 0.000480769231 0.000000000000 0.769923031050 0.400000000000
+chr1 14480000 14481000 Eya1 832.0 180000 0.000480769231 0.000000000000 0.812913656138 0.400000000000
+chr1 14481000 14482000 Eya1 832.0 181000 0.000240384615 0.000000000000 0.408530587410 0.200000000000
+chr1 14482000 14483000 Eya1 832.0 182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14483000 14484000 Eya1 832.0 183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 14484000 14485000 Eya1 832.0 184000 0.000240384615 0.000000000000 0.390595098725 0.200000000000
+chr1 14485000 14486000 Eya1 832.0 185000 0.000961538462 0.000000000000 1.539846062099 0.800000000000
+chr1 14486000 14487000 Eya1 832.0 186000 0.000961538462 0.000000000000 1.703659471393 0.800000000000
+chr1 14487000 14488000 Eya1 832.0 187000 0.000961538462 0.000000000000 1.731286381939 0.800000000000
+chr1 14488000 14489000 Eya1 832.0 188000 0.001201923077 0.000000000000 2.140962437394 1.000000000000
+chr1 14489000 14490000 Eya1 832.0 189000 0.001442307692 0.000000000000 2.793209135173 1.200000000000
+chr1 14490000 14491000 Eya1 832.0 190000 0.000721153846 0.000000000000 1.404771845823 0.600000000000
+chr1 14491000 14492000 Eya1 832.0 191000 0.001442307692 0.000000000000 2.669066506024 1.200000000000
+chr1 14492000 14493000 Eya1 832.0 192000 0.002403846154 0.000000000000 4.399560174407 2.000000000000
+chr1 14493000 14494000 Eya1 832.0 193000 0.002163461538 0.000000000000 4.289571172663 1.800000000000
+chr1 14494000 14495000 Eya1 832.0 194000 0.001682692308 0.000000000000 3.239907320421 1.400000000000
+chr1 14495000 14496000 Eya1 832.0 195000 0.002163461538 0.000000000000 4.421153111551 1.800000000000
+chr1 14496000 14497000 Eya1 832.0 196000 0.001682692308 0.000000000000 3.438674642317 1.400000000000
+chr1 14497000 14498000 Eya1 832.0 197000 0.001442307692 0.000000000000 2.729727108893 1.200000000000
+chr1 14498000 14499000 Eya1 832.0 198000 0.002644230769 0.000000000000 4.317607586564 2.200000000000
+chr1 14499000 14500000 Eya1 832.0 199000 0.003305288462 0.000000000000 5.764345200343 2.750000000000
+chr1 14500000 14501000 Eya1 832.0 200000 0.003605769231 0.000000000000 6.127958811148 3.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_3/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_3/MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.6
+# MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 18893000 18894000 Tfap2d 800.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18894000 18895000 Tfap2d 800.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18895000 18896000 Tfap2d 800.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18896000 18897000 Tfap2d 800.0 -197000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18897000 18898000 Tfap2d 800.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18898000 18899000 Tfap2d 800.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18899000 18900000 Tfap2d 800.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18900000 18901000 Tfap2d 800.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18901000 18902000 Tfap2d 800.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18902000 18903000 Tfap2d 800.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18903000 18904000 Tfap2d 800.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18904000 18905000 Tfap2d 800.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18905000 18906000 Tfap2d 800.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18906000 18907000 Tfap2d 800.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18907000 18908000 Tfap2d 800.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18908000 18909000 Tfap2d 800.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18909000 18910000 Tfap2d 800.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18910000 18911000 Tfap2d 800.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18911000 18912000 Tfap2d 800.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18912000 18913000 Tfap2d 800.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18913000 18914000 Tfap2d 800.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18914000 18915000 Tfap2d 800.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18915000 18916000 Tfap2d 800.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18916000 18917000 Tfap2d 800.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18917000 18918000 Tfap2d 800.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18918000 18919000 Tfap2d 800.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18919000 18920000 Tfap2d 800.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18920000 18921000 Tfap2d 800.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18921000 18922000 Tfap2d 800.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18922000 18923000 Tfap2d 800.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18923000 18924000 Tfap2d 800.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18924000 18925000 Tfap2d 800.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18925000 18926000 Tfap2d 800.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18926000 18927000 Tfap2d 800.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18927000 18928000 Tfap2d 800.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18928000 18929000 Tfap2d 800.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18929000 18930000 Tfap2d 800.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18930000 18931000 Tfap2d 800.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18931000 18932000 Tfap2d 800.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18932000 18933000 Tfap2d 800.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18933000 18934000 Tfap2d 800.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18934000 18935000 Tfap2d 800.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18935000 18936000 Tfap2d 800.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18936000 18937000 Tfap2d 800.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18937000 18938000 Tfap2d 800.0 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18938000 18939000 Tfap2d 800.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18939000 18940000 Tfap2d 800.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18940000 18941000 Tfap2d 800.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18941000 18942000 Tfap2d 800.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18942000 18943000 Tfap2d 800.0 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18943000 18944000 Tfap2d 800.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18944000 18945000 Tfap2d 800.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18945000 18946000 Tfap2d 800.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18946000 18947000 Tfap2d 800.0 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18947000 18948000 Tfap2d 800.0 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18948000 18949000 Tfap2d 800.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18949000 18950000 Tfap2d 800.0 -144000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18950000 18951000 Tfap2d 800.0 -143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18951000 18952000 Tfap2d 800.0 -142000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18952000 18953000 Tfap2d 800.0 -141000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18953000 18954000 Tfap2d 800.0 -140000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18954000 18955000 Tfap2d 800.0 -139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18955000 18956000 Tfap2d 800.0 -138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18956000 18957000 Tfap2d 800.0 -137000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18957000 18958000 Tfap2d 800.0 -136000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18958000 18959000 Tfap2d 800.0 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18959000 18960000 Tfap2d 800.0 -134000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18960000 18961000 Tfap2d 800.0 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18961000 18962000 Tfap2d 800.0 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18962000 18963000 Tfap2d 800.0 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18963000 18964000 Tfap2d 800.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18964000 18965000 Tfap2d 800.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18965000 18966000 Tfap2d 800.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18966000 18967000 Tfap2d 800.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18967000 18968000 Tfap2d 800.0 -126000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18968000 18969000 Tfap2d 800.0 -125000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18969000 18970000 Tfap2d 800.0 -124000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18970000 18971000 Tfap2d 800.0 -123000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18971000 18972000 Tfap2d 800.0 -122000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18972000 18973000 Tfap2d 800.0 -121000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18973000 18974000 Tfap2d 800.0 -120000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18974000 18975000 Tfap2d 800.0 -119000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18975000 18976000 Tfap2d 800.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18976000 18977000 Tfap2d 800.0 -117000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18977000 18978000 Tfap2d 800.0 -116000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18978000 18979000 Tfap2d 800.0 -115000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18979000 18980000 Tfap2d 800.0 -114000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18980000 18981000 Tfap2d 800.0 -113000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18981000 18982000 Tfap2d 800.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18982000 18983000 Tfap2d 800.0 -111000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18983000 18984000 Tfap2d 800.0 -110000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18984000 18985000 Tfap2d 800.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18985000 18986000 Tfap2d 800.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18986000 18987000 Tfap2d 800.0 -107000 0.000500000000 0.299067125362 0.829824948245 0.400000000000
+chr1 18987000 18988000 Tfap2d 800.0 -106000 0.000500000000 0.299067125362 0.946680867864 0.400000000000
+chr1 18988000 18989000 Tfap2d 800.0 -105000 0.000500000000 0.299067125362 0.915248104257 0.400000000000
+chr1 18989000 18990000 Tfap2d 800.0 -104000 0.000500000000 0.299067125362 1.134907650442 0.400000000000
+chr1 18990000 18991000 Tfap2d 800.0 -103000 0.000500000000 0.299067125362 1.243734411173 0.400000000000
+chr1 18991000 18992000 Tfap2d 800.0 -102000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18992000 18993000 Tfap2d 800.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18993000 18994000 Tfap2d 800.0 -100000 0.000250000000 0.378306706409 0.614685146810 0.200000000000
+chr1 18994000 18995000 Tfap2d 800.0 -99000 0.000250000000 0.378306706409 0.632353235816 0.200000000000
+chr1 18995000 18996000 Tfap2d 800.0 -98000 0.000250000000 0.378306706409 0.591990263285 0.200000000000
+chr1 18996000 18997000 Tfap2d 800.0 -97000 0.000250000000 0.378306706409 0.497894968781 0.200000000000
+chr1 18997000 18998000 Tfap2d 800.0 -96000 0.000250000000 0.378306706409 0.470219209914 0.200000000000
+chr1 18998000 18999000 Tfap2d 800.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 18999000 19000000 Tfap2d 800.0 -94000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19000000 19001000 Tfap2d 800.0 -93000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19001000 19002000 Tfap2d 800.0 -92000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19002000 19003000 Tfap2d 800.0 -91000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19003000 19004000 Tfap2d 800.0 -90000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19004000 19005000 Tfap2d 800.0 -89000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19005000 19006000 Tfap2d 800.0 -88000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19006000 19007000 Tfap2d 800.0 -87000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19007000 19008000 Tfap2d 800.0 -86000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19008000 19009000 Tfap2d 800.0 -85000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19009000 19010000 Tfap2d 800.0 -84000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19010000 19011000 Tfap2d 800.0 -83000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19011000 19012000 Tfap2d 800.0 -82000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19012000 19013000 Tfap2d 800.0 -81000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19013000 19014000 Tfap2d 800.0 -80000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19014000 19015000 Tfap2d 800.0 -79000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19015000 19016000 Tfap2d 800.0 -78000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19016000 19017000 Tfap2d 800.0 -77000 0.000250000000 0.378306706409 0.325421548405 0.200000000000
+chr1 19017000 19018000 Tfap2d 800.0 -76000 0.000250000000 0.378306706409 0.329731767322 0.200000000000
+chr1 19018000 19019000 Tfap2d 800.0 -75000 0.000250000000 0.378306706409 0.339570311341 0.200000000000
+chr1 19019000 19020000 Tfap2d 800.0 -74000 0.000250000000 0.378306706409 0.342731205316 0.200000000000
+chr1 19020000 19021000 Tfap2d 800.0 -73000 0.000250000000 0.378306706409 0.286334602634 0.200000000000
+chr1 19021000 19022000 Tfap2d 800.0 -72000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19022000 19023000 Tfap2d 800.0 -71000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19023000 19024000 Tfap2d 800.0 -70000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19024000 19025000 Tfap2d 800.0 -69000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19025000 19026000 Tfap2d 800.0 -68000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19026000 19027000 Tfap2d 800.0 -67000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19027000 19028000 Tfap2d 800.0 -66000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19028000 19029000 Tfap2d 800.0 -65000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19029000 19030000 Tfap2d 800.0 -64000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19030000 19031000 Tfap2d 800.0 -63000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19031000 19032000 Tfap2d 800.0 -62000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19032000 19033000 Tfap2d 800.0 -61000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19033000 19034000 Tfap2d 800.0 -60000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19034000 19035000 Tfap2d 800.0 -59000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19035000 19036000 Tfap2d 800.0 -58000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19036000 19037000 Tfap2d 800.0 -57000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19037000 19038000 Tfap2d 800.0 -56000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19038000 19039000 Tfap2d 800.0 -55000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19039000 19040000 Tfap2d 800.0 -54000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19040000 19041000 Tfap2d 800.0 -53000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19041000 19042000 Tfap2d 800.0 -52000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19042000 19043000 Tfap2d 800.0 -51000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19043000 19044000 Tfap2d 800.0 -50000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19044000 19045000 Tfap2d 800.0 -49000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19045000 19046000 Tfap2d 800.0 -48000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19046000 19047000 Tfap2d 800.0 -47000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19047000 19048000 Tfap2d 800.0 -46000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19048000 19049000 Tfap2d 800.0 -45000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19049000 19050000 Tfap2d 800.0 -44000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19050000 19051000 Tfap2d 800.0 -43000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19051000 19052000 Tfap2d 800.0 -42000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19052000 19053000 Tfap2d 800.0 -41000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19053000 19054000 Tfap2d 800.0 -40000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19054000 19055000 Tfap2d 800.0 -39000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19055000 19056000 Tfap2d 800.0 -38000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19056000 19057000 Tfap2d 800.0 -37000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19057000 19058000 Tfap2d 800.0 -36000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19058000 19059000 Tfap2d 800.0 -35000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19059000 19060000 Tfap2d 800.0 -34000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19060000 19061000 Tfap2d 800.0 -33000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19061000 19062000 Tfap2d 800.0 -32000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 19262000 19263000 Tfap2d 800.0 169000 0.001000000000 1.000000000000 1.156750545807 0.800000000000
+chr1 19263000 19264000 Tfap2d 800.0 170000 0.000750000000 1.000000000000 0.910783479301 0.600000000000
+chr1 19264000 19265000 Tfap2d 800.0 171000 0.000750000000 1.000000000000 0.885869770168 0.600000000000
+chr1 19265000 19266000 Tfap2d 800.0 172000 0.000500000000 1.000000000000 0.565404234542 0.400000000000
+chr1 19266000 19267000 Tfap2d 800.0 173000 0.000750000000 1.000000000000 0.933985467557 0.600000000000
+chr1 19267000 19268000 Tfap2d 800.0 174000 0.000500000000 1.000000000000 0.610165403210 0.400000000000
+chr1 19268000 19269000 Tfap2d 800.0 175000 0.000750000000 1.000000000000 0.965744551450 0.600000000000
+chr1 19269000 19270000 Tfap2d 800.0 176000 0.000750000000 1.000000000000 0.953415898353 0.600000000000
+chr1 19270000 19271000 Tfap2d 800.0 177000 0.000750000000 1.000000000000 0.978483428599 0.600000000000
+chr1 19271000 19272000 Tfap2d 800.0 178000 0.000500000000 1.000000000000 0.676938220343 0.400000000000
+chr1 19272000 19273000 Tfap2d 800.0 179000 0.000500000000 1.000000000000 0.718117743421 0.400000000000
+chr1 19273000 19274000 Tfap2d 800.0 180000 0.000250000000 1.000000000000 0.371674357090 0.200000000000
+chr1 19274000 19275000 Tfap2d 800.0 181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19275000 19276000 Tfap2d 800.0 182000 0.000250000000 1.000000000000 0.409401302867 0.200000000000
+chr1 19276000 19277000 Tfap2d 800.0 183000 0.000250000000 1.000000000000 0.366099241837 0.200000000000
+chr1 19277000 19278000 Tfap2d 800.0 184000 0.000750000000 1.000000000000 1.135800575275 0.600000000000
+chr1 19278000 19279000 Tfap2d 800.0 185000 0.000750000000 1.000000000000 1.077176615132 0.600000000000
+chr1 19279000 19280000 Tfap2d 800.0 186000 0.000750000000 1.000000000000 1.145033799329 0.600000000000
+chr1 19280000 19281000 Tfap2d 800.0 187000 0.000500000000 1.000000000000 0.759903290695 0.400000000000
+chr1 19281000 19282000 Tfap2d 800.0 188000 0.000500000000 1.000000000000 0.767437983333 0.400000000000
+chr1 19282000 19283000 Tfap2d 800.0 189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19283000 19284000 Tfap2d 800.0 190000 0.000250000000 1.000000000000 0.411058797704 0.200000000000
+chr1 19284000 19285000 Tfap2d 800.0 191000 0.000250000000 1.000000000000 0.414912474122 0.200000000000
+chr1 19285000 19286000 Tfap2d 800.0 192000 0.000250000000 1.000000000000 0.394260722067 0.200000000000
+chr1 19286000 19287000 Tfap2d 800.0 193000 0.000500000000 1.000000000000 0.767065077813 0.400000000000
+chr1 19287000 19288000 Tfap2d 800.0 194000 0.000500000000 1.000000000000 0.829542790092 0.400000000000
+chr1 19288000 19289000 Tfap2d 800.0 195000 0.000250000000 1.000000000000 0.431233462800 0.200000000000
+chr1 19289000 19290000 Tfap2d 800.0 196000 0.000250000000 1.000000000000 0.422249431901 0.200000000000
+chr1 19290000 19291000 Tfap2d 800.0 197000 0.000250000000 1.000000000000 0.399380990776 0.200000000000
+chr1 19291000 19292000 Tfap2d 800.0 198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19292000 19293000 Tfap2d 800.0 199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 19293000 19294000 Tfap2d 800.0 200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/output_3/MB-E10-5_chr1_chr1_4487435_4487435_Sox17.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicViewpoint/output_3/MB-E10-5_chr1_chr1_4487435_4487435_Sox17.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,405 @@
+# Interaction file, created with HiCExplorer's chicViewpoint version 3.4.3
+# MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
+# Chromosome Start End Gene Sum of interactions Relative position Relative Interactions p-value x-fold Raw
+#
+chr1 4287000 4288000 Sox17 978.0 -200000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4288000 4289000 Sox17 978.0 -199000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4289000 4290000 Sox17 978.0 -198000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4290000 4291000 Sox17 978.0 -197000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4291000 4292000 Sox17 978.0 -196000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4292000 4293000 Sox17 978.0 -195000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4293000 4294000 Sox17 978.0 -194000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4294000 4295000 Sox17 978.0 -193000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4295000 4296000 Sox17 978.0 -192000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4296000 4297000 Sox17 978.0 -191000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4297000 4298000 Sox17 978.0 -190000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4298000 4299000 Sox17 978.0 -189000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4299000 4300000 Sox17 978.0 -188000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4300000 4301000 Sox17 978.0 -187000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4301000 4302000 Sox17 978.0 -186000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4302000 4303000 Sox17 978.0 -185000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4303000 4304000 Sox17 978.0 -184000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4304000 4305000 Sox17 978.0 -183000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4305000 4306000 Sox17 978.0 -182000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4306000 4307000 Sox17 978.0 -181000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4307000 4308000 Sox17 978.0 -180000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4308000 4309000 Sox17 978.0 -179000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4309000 4310000 Sox17 978.0 -178000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4310000 4311000 Sox17 978.0 -177000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4311000 4312000 Sox17 978.0 -176000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4312000 4313000 Sox17 978.0 -175000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4313000 4314000 Sox17 978.0 -174000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4314000 4315000 Sox17 978.0 -173000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4315000 4316000 Sox17 978.0 -172000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4316000 4317000 Sox17 978.0 -171000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4317000 4318000 Sox17 978.0 -170000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4318000 4319000 Sox17 978.0 -169000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4319000 4320000 Sox17 978.0 -168000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4320000 4321000 Sox17 978.0 -167000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4321000 4322000 Sox17 978.0 -166000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4322000 4323000 Sox17 978.0 -165000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4323000 4324000 Sox17 978.0 -164000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4324000 4325000 Sox17 978.0 -163000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4325000 4326000 Sox17 978.0 -162000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4326000 4327000 Sox17 978.0 -161000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4327000 4328000 Sox17 978.0 -160000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4328000 4329000 Sox17 978.0 -159000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4329000 4330000 Sox17 978.0 -158000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4330000 4331000 Sox17 978.0 -157000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4331000 4332000 Sox17 978.0 -156000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4332000 4333000 Sox17 978.0 -155000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4333000 4334000 Sox17 978.0 -154000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4334000 4335000 Sox17 978.0 -153000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4335000 4336000 Sox17 978.0 -152000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4336000 4337000 Sox17 978.0 -151000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4337000 4338000 Sox17 978.0 -150000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4338000 4339000 Sox17 978.0 -149000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4339000 4340000 Sox17 978.0 -148000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4340000 4341000 Sox17 978.0 -147000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4341000 4342000 Sox17 978.0 -146000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4342000 4343000 Sox17 978.0 -145000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4343000 4344000 Sox17 978.0 -144000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4344000 4345000 Sox17 978.0 -143000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4345000 4346000 Sox17 978.0 -142000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4346000 4347000 Sox17 978.0 -141000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4347000 4348000 Sox17 978.0 -140000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4348000 4349000 Sox17 978.0 -139000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4349000 4350000 Sox17 978.0 -138000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4350000 4351000 Sox17 978.0 -137000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4351000 4352000 Sox17 978.0 -136000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4352000 4353000 Sox17 978.0 -135000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4353000 4354000 Sox17 978.0 -134000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4354000 4355000 Sox17 978.0 -133000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4355000 4356000 Sox17 978.0 -132000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4356000 4357000 Sox17 978.0 -131000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4357000 4358000 Sox17 978.0 -130000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4358000 4359000 Sox17 978.0 -129000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4359000 4360000 Sox17 978.0 -128000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4360000 4361000 Sox17 978.0 -127000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4361000 4362000 Sox17 978.0 -126000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4362000 4363000 Sox17 978.0 -125000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4363000 4364000 Sox17 978.0 -124000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4364000 4365000 Sox17 978.0 -123000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4365000 4366000 Sox17 978.0 -122000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4366000 4367000 Sox17 978.0 -121000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4367000 4368000 Sox17 978.0 -120000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4368000 4369000 Sox17 978.0 -119000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4369000 4370000 Sox17 978.0 -118000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4370000 4371000 Sox17 978.0 -117000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4371000 4372000 Sox17 978.0 -116000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4372000 4373000 Sox17 978.0 -115000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4373000 4374000 Sox17 978.0 -114000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4374000 4375000 Sox17 978.0 -113000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4375000 4376000 Sox17 978.0 -112000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4376000 4377000 Sox17 978.0 -111000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4377000 4378000 Sox17 978.0 -110000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4378000 4379000 Sox17 978.0 -109000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4379000 4380000 Sox17 978.0 -108000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4380000 4381000 Sox17 978.0 -107000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4381000 4382000 Sox17 978.0 -106000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4382000 4383000 Sox17 978.0 -105000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4383000 4384000 Sox17 978.0 -104000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4384000 4385000 Sox17 978.0 -103000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4385000 4386000 Sox17 978.0 -102000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4386000 4387000 Sox17 978.0 -101000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4387000 4388000 Sox17 978.0 -100000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4388000 4389000 Sox17 978.0 -99000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4389000 4390000 Sox17 978.0 -98000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4390000 4391000 Sox17 978.0 -97000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4391000 4392000 Sox17 978.0 -96000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4392000 4393000 Sox17 978.0 -95000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4393000 4394000 Sox17 978.0 -94000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4394000 4395000 Sox17 978.0 -93000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4395000 4396000 Sox17 978.0 -92000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4396000 4397000 Sox17 978.0 -91000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4397000 4398000 Sox17 978.0 -90000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4398000 4399000 Sox17 978.0 -89000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4399000 4400000 Sox17 978.0 -88000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4400000 4401000 Sox17 978.0 -87000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4401000 4402000 Sox17 978.0 -86000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4402000 4403000 Sox17 978.0 -85000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4403000 4404000 Sox17 978.0 -84000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4404000 4405000 Sox17 978.0 -83000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4405000 4406000 Sox17 978.0 -82000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4406000 4407000 Sox17 978.0 -81000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4407000 4408000 Sox17 978.0 -80000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4408000 4409000 Sox17 978.0 -79000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4409000 4410000 Sox17 978.0 -78000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4410000 4411000 Sox17 978.0 -77000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4411000 4412000 Sox17 978.0 -76000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4412000 4413000 Sox17 978.0 -75000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4413000 4414000 Sox17 978.0 -74000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4414000 4415000 Sox17 978.0 -73000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4415000 4416000 Sox17 978.0 -72000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4416000 4417000 Sox17 978.0 -71000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4417000 4418000 Sox17 978.0 -70000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4418000 4419000 Sox17 978.0 -69000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4419000 4420000 Sox17 978.0 -68000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4420000 4421000 Sox17 978.0 -67000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4421000 4422000 Sox17 978.0 -66000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4422000 4423000 Sox17 978.0 -65000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4423000 4424000 Sox17 978.0 -64000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4424000 4425000 Sox17 978.0 -63000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4425000 4426000 Sox17 978.0 -62000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4426000 4427000 Sox17 978.0 -61000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4427000 4428000 Sox17 978.0 -60000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4428000 4429000 Sox17 978.0 -59000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4429000 4430000 Sox17 978.0 -58000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4430000 4431000 Sox17 978.0 -57000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4433000 4434000 Sox17 978.0 -54000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4437000 4438000 Sox17 978.0 -50000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4438000 4439000 Sox17 978.0 -49000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4439000 4440000 Sox17 978.0 -48000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4440000 4441000 Sox17 978.0 -47000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4441000 4442000 Sox17 978.0 -46000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
+chr1 4442000 4443000 Sox17 978.0 -45000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4453000 4454000 Sox17 978.0 -34000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4455000 4456000 Sox17 978.0 -32000 0.000613496933 0.012107544045 0.690390275473 0.600000000000
+chr1 4456000 4457000 Sox17 978.0 -31000 0.000613496933 0.012107544045 0.674440665025 0.600000000000
+chr1 4457000 4458000 Sox17 978.0 -30000 0.000613496933 0.012107544045 0.657091708882 0.600000000000
+chr1 4458000 4459000 Sox17 978.0 -29000 0.000613496933 0.012107544045 0.592334844952 0.600000000000
+chr1 4459000 4460000 Sox17 978.0 -28000 0.000613496933 0.012107544045 0.690390275473 0.600000000000
+chr1 4460000 4461000 Sox17 978.0 -27000 0.000000000000 1.000000000000 0.000000000000 0.000000000000
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+chr1 4680000 4681000 Sox17 978.0 193000 0.001022494888 0.000000000000 2.027336523322 1.000000000000
+chr1 4681000 4682000 Sox17 978.0 194000 0.000817995910 0.000000000000 1.574994385387 0.800000000000
+chr1 4682000 4683000 Sox17 978.0 195000 0.000613496933 0.000000000000 1.253714856445 0.600000000000
+chr1 4683000 4684000 Sox17 978.0 196000 0.000204498978 0.000000000000 0.417904952148 0.200000000000
+chr1 4684000 4685000 Sox17 978.0 197000 0.001022494888 0.000000000000 1.935184862473 1.000000000000
+chr1 4685000 4686000 Sox17 978.0 198000 0.000817995910 0.000000000000 1.335657003912 0.800000000000
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/two_matrices.hdf5
Binary file test-data/cHi-C/chicViewpoint/two_matrices.hdf5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/chicViewpoint/viewpoints.tar
Binary file test-data/cHi-C/chicViewpoint/viewpoints.tar has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/hg19.chrom.sizes
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/hg19.chrom.sizes Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,93 @@
+chr1 249250621
+chr2 243199373
+chr3 198022430
+chr4 191154276
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+chr15 102531392
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+chr17 81195210
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+chr20 63025520
+chrY 59373566
+chr19 59128983
+chr22 51304566
+chr21 48129895
+chr6_ssto_hap7 4928567
+chr6_mcf_hap5 4833398
+chr6_cox_hap2 4795371
+chr6_mann_hap4 4683263
+chr6_apd_hap1 4622290
+chr6_qbl_hap6 4611984
+chr6_dbb_hap3 4610396
+chr17_ctg5_hap1 1680828
+chr4_ctg9_hap1 590426
+chr1_gl000192_random 547496
+chrUn_gl000225 211173
+chr4_gl000194_random 191469
+chr4_gl000193_random 189789
+chr9_gl000200_random 187035
+chrUn_gl000222 186861
+chrUn_gl000212 186858
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+chrUn_gl000238 39939
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+chrUn_gl000249 38502
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+chr8_gl000197_random 37175
+chrUn_gl000245 36651
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+chrUn_gl000235 34474
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+chrUn_gl000229 19913
+chrM 16571
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/plots.tar.gz
Binary file test-data/cHi-C/plots.tar.gz has changed
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/referencePoints.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/referencePoints.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,43 @@
+chr1 4487435 4487435 Sox17
+chr1 14300280 14300280 Eya1
+chr1 19093103 19093103 Tfap2d
+chr1 19198995 19198995 Tfap2b
+chr1 24202042 24202042 Col9a1
+chr1 33776741 33776741 Rab23
+chr1 38684089 38684089 Aff3
+chr1 42753991 42753991 Pou3f3
+chr1 52176282 52176282 Stat1
+chr1 52557292 52557292 Nab1
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+chr1 57028178 57028178 Satb2
+chr1 59821123 59821123 Bmpr2
+chr1 66991630 66991630 Myl1
+chr1 74648029 74648029 Stk36
+chr1 74818466 74818466 Wnt6
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+chr1 74998246 74998246 Ihh
+chr1 75356867 75356867 Des
+chr1 77511663 77511663 Epha4
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+chr1 93698054 93698054 Twist2
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+chr1 180249284 180249284 Gm16586
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+chr1 188529871 188529871 Tgfb2
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diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/referencePoints_chicViewpoint.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/referencePoints_chicViewpoint.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+chr1 4487435 4487435 Sox17
+chr1 14300280 14300280 Eya1
+chr1 19093103 19093103 Tfap2d
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/cHi-C/target_list.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/target_list.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+chr1 4480000 4549000
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diff -r 000000000000 -r 0c22e9361298 test-data/distVsCounts.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/distVsCounts.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,600 @@
+ Matrix Chromosome Distance Contacts Number_bins Scale_factor
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diff -r 000000000000 -r 0c22e9361298 test-data/dm3_genes.bed.gz
Binary file test-data/dm3_genes.bed.gz has changed
diff -r 000000000000 -r 0c22e9361298 test-data/domains.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/domains.bed Thu Dec 05 21:42:17 2024 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/find_TADs/multiFDR_boundaries.bed
diff -r 000000000000 -r 0c22e9361298 test-data/find_TADs/multiFDR_boundaries.gff
diff -r 000000000000 -r 0c22e9361298 test-data/find_TADs/multiFDR_domains.bed
diff -r 000000000000 -r 0c22e9361298 test-data/find_TADs/multiFDR_tad_score.bm
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/GSM1436265_RAD21_ENCFF002EMQ.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/hg19.chrom.sizes
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicConvertFormat/hg19.chrom.sizes Thu Dec 05 21:42:17 2024 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/small_test_matrix_chr4.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicConvertFormat/small_test_matrix_chr4.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,271 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/small_test_matrix_chr4.cool
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/small_test_matrix_chr4.ginteractions.tsv
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/small_test_matrix_chr4.hicpro
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/small_test_matrix_chr4.homer
Binary file test-data/hicConvertFormat/small_test_matrix_chr4.homer has changed
diff -r 000000000000 -r 0c22e9361298 test-data/hicConvertFormat/test_matrix.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicCorrectMatrix/diagnostic_plot.png
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diff -r 000000000000 -r 0c22e9361298 test-data/hicCorrectMatrix/hicCorrectMatrix_result1.npz.h5
Binary file test-data/hicCorrectMatrix/hicCorrectMatrix_result1.npz.h5 has changed
diff -r 000000000000 -r 0c22e9361298 test-data/hicCorrelate_heatmap_result1.png
Binary file test-data/hicCorrelate_heatmap_result1.png has changed
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Binary file test-data/hicCorrelate_scatter_result1.png has changed
diff -r 000000000000 -r 0c22e9361298 test-data/hicDetectLoops/loops.bedgraph
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicDetectLoops/loops.bedgraph Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,2 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicDifferentialTAD/accepted.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicDifferentialTAD/accepted.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,4 @@
+# Created with HiCExplorer's hicDifferentialTAD version 3.7.6
+# H0 'regions are equal' H0 is accepted for all p-value greater the user given p-value threshold; i.e. regions in this file are not considered as differential.
+# Accepted regions with Wilcoxon rank-sum test to p-value: 1.0 with used mode: all and modeReject: one
+# Chromosome start end name score strand p-value left-inter-TAD p-value right-inter-TAD p-value intra-TAD W left-inter-TAD W right-inter-TAD W intra-TAD
diff -r 000000000000 -r 0c22e9361298 test-data/hicDifferentialTAD/multiNone_domains.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicDifferentialTAD/multiNone_domains.bed Thu Dec 05 21:42:17 2024 +0000
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+chr3R 12200000 12260000 ID_0.01_1218 -0.055654000000 . 12200000 12260000 51,160,44
+chr3R 12260000 12295000 ID_0.01_1219 -0.104287250000 . 12260000 12295000 31,120,180
+chr3R 12295000 12475000 ID_0.01_1220 -0.111456750000 . 12295000 12475000 51,160,44
+chr3R 12475000 12505000 ID_0.01_1221 -0.012502750000 . 12475000 12505000 31,120,180
+chr3R 12505000 12575000 ID_0.01_1222 -0.009183000000 . 12505000 12575000 51,160,44
+chr3R 12575000 12670000 ID_0.01_1223 -0.026389000000 . 12575000 12670000 31,120,180
+chr3R 12670000 12740000 ID_0.01_1224 -0.043900250000 . 12670000 12740000 51,160,44
+chr3R 12740000 12775000 ID_0.01_1225 -0.009504000000 . 12740000 12775000 31,120,180
+chr3R 12775000 12805000 ID_0.01_1226 -0.009823000000 . 12775000 12805000 51,160,44
+chr3R 12805000 12875000 ID_0.01_1227 -0.017688500000 . 12805000 12875000 31,120,180
+chr3R 12875000 12920000 ID_0.01_1228 -0.085944000000 . 12875000 12920000 51,160,44
+chr3R 12920000 13055000 ID_0.01_1229 -0.088056000000 . 12920000 13055000 31,120,180
+chr3R 13055000 13065000 ID_0.01_1230 0.025519750000 . 13055000 13065000 51,160,44
+chr3R 13065000 13165000 ID_0.01_1231 0.049500250000 . 13065000 13165000 31,120,180
+chr3R 13165000 13200000 ID_0.01_1232 0.043786750000 . 13165000 13200000 51,160,44
+chr3R 13200000 13225000 ID_0.01_1233 0.042425500000 . 13200000 13225000 31,120,180
+chr3R 13225000 13315000 ID_0.01_1234 0.054434500000 . 13225000 13315000 51,160,44
+chr3R 13315000 13360000 ID_0.01_1235 0.110922750000 . 13315000 13360000 31,120,180
+chr3R 13360000 13440000 ID_0.01_1236 0.016674250000 . 13360000 13440000 51,160,44
+chr3R 13440000 13495000 ID_0.01_1237 -0.061255250000 . 13440000 13495000 31,120,180
+chr3R 13495000 13545000 ID_0.01_1238 -0.082847750000 . 13495000 13545000 51,160,44
+chr3R 13545000 13590000 ID_0.01_1239 -0.061107250000 . 13545000 13590000 31,120,180
+chr3R 13590000 13725000 ID_0.01_1240 -0.039287250000 . 13590000 13725000 51,160,44
+chr3R 13725000 13830000 ID_0.01_1241 0.023938000000 . 13725000 13830000 31,120,180
+chr3R 13830000 13905000 ID_0.01_1242 0.007938750000 . 13830000 13905000 51,160,44
+chr3R 13905000 13965000 ID_0.01_1243 -0.012050750000 . 13905000 13965000 31,120,180
+chr3R 13965000 14070000 ID_0.01_1244 -0.029611750000 . 13965000 14070000 51,160,44
+chr3R 14070000 14120000 ID_0.01_1245 -0.068935250000 . 14070000 14120000 31,120,180
+chr3R 14120000 14240000 ID_0.01_1246 -0.038396750000 . 14120000 14240000 51,160,44
+chr3R 14240000 14380000 ID_0.01_1247 -0.052291500000 . 14240000 14380000 31,120,180
+chr3R 14380000 14480000 ID_0.01_1248 -0.032096000000 . 14380000 14480000 51,160,44
+chr3R 14480000 14565000 ID_0.01_1249 -0.098399500000 . 14480000 14565000 31,120,180
+chr3R 14565000 14735000 ID_0.01_1250 -0.095740250000 . 14565000 14735000 51,160,44
+chr3R 14735000 14775000 ID_0.01_1251 -0.086167000000 . 14735000 14775000 31,120,180
+chr3R 14775000 14875000 ID_0.01_1252 -0.083724500000 . 14775000 14875000 51,160,44
+chr3R 14875000 14985000 ID_0.01_1253 -0.092619250000 . 14875000 14985000 31,120,180
+chr3R 14985000 15060000 ID_0.01_1254 -0.067210500000 . 14985000 15060000 51,160,44
+chr3R 15060000 15155000 ID_0.01_1255 -0.059893500000 . 15060000 15155000 31,120,180
+chr3R 15155000 15315000 ID_0.01_1256 0.062700250000 . 15155000 15315000 51,160,44
+chr3R 15315000 15370000 ID_0.01_1257 0.035499000000 . 15315000 15370000 31,120,180
+chr3R 15370000 15490000 ID_0.01_1258 0.004968750000 . 15370000 15490000 51,160,44
+chr3R 15490000 15515000 ID_0.01_1259 -0.049440750000 . 15490000 15515000 31,120,180
+chr3R 15515000 15560000 ID_0.01_1260 -0.045565500000 . 15515000 15560000 51,160,44
+chr3R 15560000 15595000 ID_0.01_1261 -0.059127500000 . 15560000 15595000 31,120,180
+chr3R 15595000 15645000 ID_0.01_1262 -0.075517000000 . 15595000 15645000 51,160,44
+chr3R 15645000 15745000 ID_0.01_1263 -0.036526250000 . 15645000 15745000 31,120,180
+chr3R 15745000 15830000 ID_0.01_1264 -0.012124500000 . 15745000 15830000 51,160,44
+chr3R 15830000 15865000 ID_0.01_1265 0.011944250000 . 15830000 15865000 31,120,180
+chr3R 15865000 15915000 ID_0.01_1266 0.035109750000 . 15865000 15915000 51,160,44
+chr3R 15915000 15935000 ID_0.01_1267 0.065872500000 . 15915000 15935000 31,120,180
+chr3R 15935000 16115000 ID_0.01_1268 0.066610750000 . 15935000 16115000 51,160,44
+chr3R 16115000 16155000 ID_0.01_1269 -0.087499000000 . 16115000 16155000 31,120,180
+chr3R 16155000 16295000 ID_0.01_1270 -0.053086500000 . 16155000 16295000 51,160,44
+chr3R 16295000 16350000 ID_0.01_1271 0.055833750000 . 16295000 16350000 31,120,180
+chr3R 16350000 16445000 ID_0.01_1272 0.028535250000 . 16350000 16445000 51,160,44
+chr3R 16445000 16565000 ID_0.01_1273 -0.094774000000 . 16445000 16565000 31,120,180
+chr3R 16565000 16670000 ID_0.01_1274 -0.072765750000 . 16565000 16670000 51,160,44
+chr3R 16670000 16700000 ID_0.01_1275 -0.067027000000 . 16670000 16700000 31,120,180
+chr3R 16700000 16770000 ID_0.01_1276 -0.052485750000 . 16700000 16770000 51,160,44
+chr3R 16770000 16805000 ID_0.01_1277 -0.036296000000 . 16770000 16805000 31,120,180
+chr3R 16805000 16910000 ID_0.01_1278 -0.036527500000 . 16805000 16910000 51,160,44
+chr3R 16910000 17105000 ID_0.01_1279 -0.114692750000 . 16910000 17105000 31,120,180
+chr3R 17105000 17215000 ID_0.01_1280 -0.054786750000 . 17105000 17215000 51,160,44
+chr3R 17215000 17315000 ID_0.01_1281 -0.079377750000 . 17215000 17315000 31,120,180
+chr3R 17315000 17425000 ID_0.01_1282 -0.017845000000 . 17315000 17425000 51,160,44
+chr3R 17425000 17490000 ID_0.01_1283 -0.072665000000 . 17425000 17490000 31,120,180
+chr3R 17490000 17520000 ID_0.01_1284 -0.049994250000 . 17490000 17520000 51,160,44
+chr3R 17520000 17600000 ID_0.01_1285 -0.029002750000 . 17520000 17600000 31,120,180
+chr3R 17600000 17630000 ID_0.01_1286 -0.018032000000 . 17600000 17630000 51,160,44
+chr3R 17630000 17670000 ID_0.01_1287 0.002561250000 . 17630000 17670000 31,120,180
+chr3R 17670000 17700000 ID_0.01_1288 -0.003981250000 . 17670000 17700000 51,160,44
+chr3R 17700000 17715000 ID_0.01_1289 -0.020505750000 . 17700000 17715000 31,120,180
+chr3R 17715000 17745000 ID_0.01_1290 -0.016624000000 . 17715000 17745000 51,160,44
+chr3R 17745000 17835000 ID_0.01_1291 -0.031856750000 . 17745000 17835000 31,120,180
+chr3R 17835000 17880000 ID_0.01_1292 -0.020281250000 . 17835000 17880000 51,160,44
+chr3R 17880000 17915000 ID_0.01_1293 -0.042281000000 . 17880000 17915000 31,120,180
+chr3R 17915000 17935000 ID_0.01_1294 -0.052102250000 . 17915000 17935000 51,160,44
+chr3R 17935000 18030000 ID_0.01_1295 -0.048945250000 . 17935000 18030000 31,120,180
+chr3R 18030000 18120000 ID_0.01_1296 -0.075844250000 . 18030000 18120000 51,160,44
+chr3R 18120000 18180000 ID_0.01_1297 -0.083323500000 . 18120000 18180000 31,120,180
+chr3R 18180000 18310000 ID_0.01_1298 -0.096844750000 . 18180000 18310000 51,160,44
+chr3R 18310000 18395000 ID_0.01_1299 -0.069608000000 . 18310000 18395000 31,120,180
+chr3R 18395000 18445000 ID_0.01_1300 -0.067297750000 . 18395000 18445000 51,160,44
+chr3R 18445000 18485000 ID_0.01_1301 -0.043970250000 . 18445000 18485000 31,120,180
+chr3R 18485000 18525000 ID_0.01_1302 -0.053395500000 . 18485000 18525000 51,160,44
+chr3R 18525000 18690000 ID_0.01_1303 -0.114692750000 . 18525000 18690000 31,120,180
+chr3R 18690000 18735000 ID_0.01_1304 -0.075545000000 . 18690000 18735000 51,160,44
+chr3R 18735000 18885000 ID_0.01_1305 -0.048598500000 . 18735000 18885000 31,120,180
+chr3R 18885000 19005000 ID_0.01_1306 -0.099724250000 . 18885000 19005000 51,160,44
+chr3R 19005000 19100000 ID_0.01_1307 -0.105493500000 . 19005000 19100000 31,120,180
+chr3R 19100000 19185000 ID_0.01_1308 -0.080215000000 . 19100000 19185000 51,160,44
+chr3R 19185000 19255000 ID_0.01_1309 -0.111752500000 . 19185000 19255000 31,120,180
+chr3R 19255000 19285000 ID_0.01_1310 -0.078042250000 . 19255000 19285000 51,160,44
+chr3R 19285000 19380000 ID_0.01_1311 -0.069411000000 . 19285000 19380000 31,120,180
+chr3R 19380000 19460000 ID_0.01_1312 -0.055802250000 . 19380000 19460000 51,160,44
+chr3R 19460000 19565000 ID_0.01_1313 -0.011615250000 . 19460000 19565000 31,120,180
+chr3R 19565000 19695000 ID_0.01_1314 -0.089052750000 . 19565000 19695000 51,160,44
+chr3R 19695000 19740000 ID_0.01_1315 -0.105211250000 . 19695000 19740000 31,120,180
+chr3R 19740000 19935000 ID_0.01_1316 -0.111752500000 . 19740000 19935000 51,160,44
+chr3R 19935000 20020000 ID_0.01_1317 -0.106310750000 . 19935000 20020000 31,120,180
+chr3R 20020000 20050000 ID_0.01_1318 -0.083403000000 . 20020000 20050000 51,160,44
+chr3R 20050000 20150000 ID_0.01_1319 -0.090917500000 . 20050000 20150000 31,120,180
+chr3R 20150000 20220000 ID_0.01_1320 -0.022793500000 . 20150000 20220000 51,160,44
+chr3R 20220000 20335000 ID_0.01_1321 -0.034021000000 . 20220000 20335000 31,120,180
+chr3R 20335000 20375000 ID_0.01_1322 -0.103608250000 . 20335000 20375000 51,160,44
+chr3R 20375000 20455000 ID_0.01_1323 -0.114692750000 . 20375000 20455000 31,120,180
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+chr3R 20615000 20710000 ID_0.01_1325 -0.099168000000 . 20615000 20710000 31,120,180
+chr3R 20710000 20720000 ID_0.01_1326 -0.073518750000 . 20710000 20720000 51,160,44
+chr3R 20720000 20765000 ID_0.01_1327 -0.070509500000 . 20720000 20765000 31,120,180
+chr3R 20765000 20860000 ID_0.01_1328 -0.086298500000 . 20765000 20860000 51,160,44
+chr3R 20860000 20900000 ID_0.01_1329 -0.012765250000 . 20860000 20900000 31,120,180
+chr3R 20900000 20935000 ID_0.01_1330 -0.021853250000 . 20900000 20935000 51,160,44
+chr3R 20935000 20965000 ID_0.01_1331 -0.058919750000 . 20935000 20965000 31,120,180
+chr3R 20965000 21085000 ID_0.01_1332 -0.061393500000 . 20965000 21085000 51,160,44
+chr3R 21085000 21175000 ID_0.01_1333 -0.094928000000 . 21085000 21175000 31,120,180
+chr3R 21175000 21220000 ID_0.01_1334 -0.041395500000 . 21175000 21220000 51,160,44
+chr3R 21220000 21320000 ID_0.01_1335 -0.050287250000 . 21220000 21320000 31,120,180
+chr3R 21320000 21335000 ID_0.01_1336 -0.086029000000 . 21320000 21335000 51,160,44
+chr3R 21335000 21390000 ID_0.01_1337 -0.061001750000 . 21335000 21390000 31,120,180
+chr3R 21390000 21475000 ID_0.01_1338 -0.065676500000 . 21390000 21475000 51,160,44
+chr3R 21475000 21615000 ID_0.01_1339 -0.093298500000 . 21475000 21615000 31,120,180
+chr3R 21615000 21730000 ID_0.01_1340 -0.081974000000 . 21615000 21730000 51,160,44
+chr3R 21730000 21820000 ID_0.01_1341 0.070250750000 . 21730000 21820000 31,120,180
+chr3R 21820000 21845000 ID_0.01_1342 -0.001459750000 . 21820000 21845000 51,160,44
+chr3R 21845000 21950000 ID_0.01_1343 0.036051500000 . 21845000 21950000 31,120,180
+chr3R 21950000 21990000 ID_0.01_1344 0.002742000000 . 21950000 21990000 51,160,44
+chr3R 21990000 22075000 ID_0.01_1345 0.007133750000 . 21990000 22075000 31,120,180
+chr3R 22075000 22220000 ID_0.01_1346 -0.087915000000 . 22075000 22220000 51,160,44
+chr3R 22220000 22270000 ID_0.01_1347 0.061450500000 . 22220000 22270000 31,120,180
+chr3R 22270000 22310000 ID_0.01_1348 -0.025753250000 . 22270000 22310000 51,160,44
+chr3R 22310000 22380000 ID_0.01_1349 -0.049464750000 . 22310000 22380000 31,120,180
+chr3R 22380000 22500000 ID_0.01_1350 -0.055847000000 . 22380000 22500000 51,160,44
+chr3R 22500000 22520000 ID_0.01_1351 -0.063110500000 . 22500000 22520000 31,120,180
+chr3R 22520000 22605000 ID_0.01_1352 -0.062648000000 . 22520000 22605000 51,160,44
+chr3R 22605000 22695000 ID_0.01_1353 -0.011252000000 . 22605000 22695000 31,120,180
+chr3R 22695000 22780000 ID_0.01_1354 -0.089033000000 . 22695000 22780000 51,160,44
+chr3R 22780000 22885000 ID_0.01_1355 -0.040500250000 . 22780000 22885000 31,120,180
+chr3R 22885000 22985000 ID_0.01_1356 -0.056834750000 . 22885000 22985000 51,160,44
+chr3R 22985000 23110000 ID_0.01_1357 -0.023781500000 . 22985000 23110000 31,120,180
+chr3R 23110000 23185000 ID_0.01_1358 -0.100625000000 . 23110000 23185000 51,160,44
+chr3R 23185000 23195000 ID_0.01_1359 -0.002947250000 . 23185000 23195000 31,120,180
+chr3R 23195000 23415000 ID_0.01_1360 -0.002757750000 . 23195000 23415000 51,160,44
+chr3R 23415000 23560000 ID_0.01_1361 -0.090027000000 . 23415000 23560000 31,120,180
+chr3R 23560000 23770000 ID_0.01_1362 -0.104602000000 . 23560000 23770000 51,160,44
+chr3R 23770000 23815000 ID_0.01_1363 -0.111910500000 . 23770000 23815000 31,120,180
+chr3R 23815000 23920000 ID_0.01_1364 -0.066076500000 . 23815000 23920000 51,160,44
+chr3R 23920000 24030000 ID_0.01_1365 -0.042184750000 . 23920000 24030000 31,120,180
+chr3R 24030000 24160000 ID_0.01_1366 -0.055795750000 . 24030000 24160000 51,160,44
+chr3R 24160000 24205000 ID_0.01_1367 -0.015467250000 . 24160000 24205000 31,120,180
+chr3R 24205000 24345000 ID_0.01_1368 -0.032601500000 . 24205000 24345000 51,160,44
+chr3R 24345000 24375000 ID_0.01_1369 -0.062306500000 . 24345000 24375000 31,120,180
+chr3R 24375000 24450000 ID_0.01_1370 -0.074939500000 . 24375000 24450000 51,160,44
+chr3R 24450000 24625000 ID_0.01_1371 -0.098360750000 . 24450000 24625000 31,120,180
+chr3R 24625000 24745000 ID_0.01_1372 -0.031713750000 . 24625000 24745000 51,160,44
+chr3R 24745000 24885000 ID_0.01_1373 -0.085896250000 . 24745000 24885000 31,120,180
+chr3R 24885000 24995000 ID_0.01_1374 -0.093237250000 . 24885000 24995000 51,160,44
+chr3R 24995000 25090000 ID_0.01_1375 -0.058978500000 . 24995000 25090000 31,120,180
+chr3R 25090000 25165000 ID_0.01_1376 0.036742250000 . 25090000 25165000 51,160,44
+chr3R 25165000 25330000 ID_0.01_1377 -0.046246500000 . 25165000 25330000 31,120,180
+chr3R 25330000 25405000 ID_0.01_1378 -0.083033250000 . 25330000 25405000 51,160,44
+chr3R 25405000 25570000 ID_0.01_1379 -0.005462250000 . 25405000 25570000 31,120,180
+chr3R 25570000 25580000 ID_0.01_1380 -0.046540750000 . 25570000 25580000 51,160,44
+chr3R 25580000 25730000 ID_0.01_1381 -0.018715750000 . 25580000 25730000 31,120,180
+chr3R 25730000 25880000 ID_0.01_1382 -0.008588750000 . 25730000 25880000 51,160,44
+chr3R 25880000 25990000 ID_0.01_1383 -0.105816250000 . 25880000 25990000 31,120,180
+chr3R 25990000 26050000 ID_0.01_1384 -0.090403000000 . 25990000 26050000 51,160,44
+chr3R 26050000 26180000 ID_0.01_1385 -0.093531500000 . 26050000 26180000 31,120,180
+chr3R 26180000 26275000 ID_0.01_1386 -0.114692750000 . 26180000 26275000 51,160,44
+chr3R 26275000 26330000 ID_0.01_1387 -0.100273500000 . 26275000 26330000 31,120,180
+chr3R 26330000 26490000 ID_0.01_1388 -0.092304000000 . 26330000 26490000 51,160,44
+chr3R 26490000 26565000 ID_0.01_1389 0.062796500000 . 26490000 26565000 31,120,180
+chr3R 26565000 26640000 ID_0.01_1390 -0.019744750000 . 26565000 26640000 51,160,44
+chr3R 26640000 26715000 ID_0.01_1391 -0.074307250000 . 26640000 26715000 31,120,180
+chr3R 26715000 26870000 ID_0.01_1392 -0.049789000000 . 26715000 26870000 51,160,44
+chr3R 26870000 27045000 ID_0.01_1393 -0.024990500000 . 26870000 27045000 31,120,180
+chr3R 27045000 27155000 ID_0.01_1394 -0.074189000000 . 27045000 27155000 51,160,44
+chr3R 27155000 27185000 ID_0.01_1395 -0.006099250000 . 27155000 27185000 31,120,180
+chr3R 27185000 27250000 ID_0.01_1396 -0.012810250000 . 27185000 27250000 51,160,44
+chr3R 27250000 27385000 ID_0.01_1397 -0.049902750000 . 27250000 27385000 31,120,180
+chr3R 27385000 27420000 ID_0.01_1398 -0.041305000000 . 27385000 27420000 51,160,44
+chr3R 27420000 27570000 ID_0.01_1399 -0.049929500000 . 27420000 27570000 31,120,180
+chr3R 27570000 27700000 ID_0.01_1400 -0.080943250000 . 27570000 27700000 51,160,44
+chr3R 27700000 27750000 ID_0.01_1401 -0.015350000000 . 27700000 27750000 31,120,180
+chr3R 27750000 27770000 ID_0.01_1402 0.013577250000 . 27750000 27770000 51,160,44
diff -r 000000000000 -r 0c22e9361298 test-data/hicDifferentialTAD/rejected.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicDifferentialTAD/rejected.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1406 @@
+# Created with HiCExplorer's hicDifferentialTAD version 3.7.6
+# H0 'regions are equal' H0 is rejected for all p-value smaller or equal the user given p-value threshold; i.e. regions in this file are considered as differential.
+# Rejected regions with Wilcoxon rank-sum test to p-value: 1.0 with used mode: all and modeReject: one
+# Chromosome start end name score strand p-value left-inter-TAD p-value right-inter-TAD p-value intra-TAD W left-inter-TAD W right-inter-TAD W intra-TAD
+chr3L 165000 260000 ID_0.01_1 -0.10316675 . nan 1.0 1.0 nan 0.0 0.0
+chr3L 260000 335000 ID_0.01_2 -0.026655 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 335000 360000 ID_0.01_3 -0.030848 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 360000 485000 ID_0.01_4 -0.0580815 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 485000 525000 ID_0.01_5 -0.07169775 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 525000 680000 ID_0.01_6 -0.1060405 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 680000 705000 ID_0.01_7 -0.0148855 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 705000 740000 ID_0.01_8 0.002784 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 740000 870000 ID_0.01_9 0.00949975 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 870000 1010000 ID_0.01_10 -0.09546975 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 1010000 1040000 ID_0.01_11 -0.05182175 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 1040000 1110000 ID_0.01_12 -0.05874875 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 1110000 1210000 ID_0.01_13 -0.048349 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3L 1210000 1245000 ID_0.01_14 -0.0567565 . 1.0 1.0 1.0 0.0 0.0 0.0
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+chr3R 19565000 19695000 ID_0.01_1314 -0.08905275 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 19695000 19740000 ID_0.01_1315 -0.10521125 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 19740000 19935000 ID_0.01_1316 -0.1117525 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 19935000 20020000 ID_0.01_1317 -0.10631075 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20020000 20050000 ID_0.01_1318 -0.083403 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20050000 20150000 ID_0.01_1319 -0.0909175 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20150000 20220000 ID_0.01_1320 -0.0227935 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20220000 20335000 ID_0.01_1321 -0.034021 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20335000 20375000 ID_0.01_1322 -0.10360825 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20375000 20455000 ID_0.01_1323 -0.11469275 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20455000 20615000 ID_0.01_1324 -0.10752325 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20615000 20710000 ID_0.01_1325 -0.099168 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20710000 20720000 ID_0.01_1326 -0.07351875 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20720000 20765000 ID_0.01_1327 -0.0705095 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20765000 20860000 ID_0.01_1328 -0.0862985 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20860000 20900000 ID_0.01_1329 -0.01276525 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20900000 20935000 ID_0.01_1330 -0.02185325 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20935000 20965000 ID_0.01_1331 -0.05891975 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 20965000 21085000 ID_0.01_1332 -0.0613935 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21085000 21175000 ID_0.01_1333 -0.094928 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21175000 21220000 ID_0.01_1334 -0.0413955 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21220000 21320000 ID_0.01_1335 -0.05028725 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21320000 21335000 ID_0.01_1336 -0.086029 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21335000 21390000 ID_0.01_1337 -0.06100175 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21390000 21475000 ID_0.01_1338 -0.0656765 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21475000 21615000 ID_0.01_1339 -0.0932985 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21615000 21730000 ID_0.01_1340 -0.081974 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21730000 21820000 ID_0.01_1341 0.07025075 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21820000 21845000 ID_0.01_1342 -0.00145975 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21845000 21950000 ID_0.01_1343 0.0360515 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21950000 21990000 ID_0.01_1344 0.002742 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 21990000 22075000 ID_0.01_1345 0.00713375 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22075000 22220000 ID_0.01_1346 -0.087915 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22220000 22270000 ID_0.01_1347 0.0614505 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22270000 22310000 ID_0.01_1348 -0.02575325 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22310000 22380000 ID_0.01_1349 -0.04946475 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22380000 22500000 ID_0.01_1350 -0.055847 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22500000 22520000 ID_0.01_1351 -0.0631105 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22520000 22605000 ID_0.01_1352 -0.062648 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22605000 22695000 ID_0.01_1353 -0.011252 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22695000 22780000 ID_0.01_1354 -0.089033 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22780000 22885000 ID_0.01_1355 -0.04050025 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22885000 22985000 ID_0.01_1356 -0.05683475 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 22985000 23110000 ID_0.01_1357 -0.0237815 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23110000 23185000 ID_0.01_1358 -0.100625 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23185000 23195000 ID_0.01_1359 -0.00294725 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23195000 23415000 ID_0.01_1360 -0.00275775 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23415000 23560000 ID_0.01_1361 -0.090027 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23560000 23770000 ID_0.01_1362 -0.104602 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23770000 23815000 ID_0.01_1363 -0.1119105 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23815000 23920000 ID_0.01_1364 -0.0660765 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 23920000 24030000 ID_0.01_1365 -0.04218475 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24030000 24160000 ID_0.01_1366 -0.05579575 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24160000 24205000 ID_0.01_1367 -0.01546725 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24205000 24345000 ID_0.01_1368 -0.0326015 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24345000 24375000 ID_0.01_1369 -0.0623065 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24375000 24450000 ID_0.01_1370 -0.0749395 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24450000 24625000 ID_0.01_1371 -0.09836075 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24625000 24745000 ID_0.01_1372 -0.03171375 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24745000 24885000 ID_0.01_1373 -0.08589625 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24885000 24995000 ID_0.01_1374 -0.09323725 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 24995000 25090000 ID_0.01_1375 -0.0589785 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25090000 25165000 ID_0.01_1376 0.03674225 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25165000 25330000 ID_0.01_1377 -0.0462465 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25330000 25405000 ID_0.01_1378 -0.08303325 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25405000 25570000 ID_0.01_1379 -0.00546225 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25570000 25580000 ID_0.01_1380 -0.04654075 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25580000 25730000 ID_0.01_1381 -0.01871575 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25730000 25880000 ID_0.01_1382 -0.00858875 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25880000 25990000 ID_0.01_1383 -0.10581625 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 25990000 26050000 ID_0.01_1384 -0.090403 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26050000 26180000 ID_0.01_1385 -0.0935315 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26180000 26275000 ID_0.01_1386 -0.11469275 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26275000 26330000 ID_0.01_1387 -0.1002735 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26330000 26490000 ID_0.01_1388 -0.092304 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26490000 26565000 ID_0.01_1389 0.0627965 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26565000 26640000 ID_0.01_1390 -0.01974475 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26640000 26715000 ID_0.01_1391 -0.07430725 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26715000 26870000 ID_0.01_1392 -0.049789 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 26870000 27045000 ID_0.01_1393 -0.0249905 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27045000 27155000 ID_0.01_1394 -0.074189 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27155000 27185000 ID_0.01_1395 -0.00609925 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27185000 27250000 ID_0.01_1396 -0.01281025 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27250000 27385000 ID_0.01_1397 -0.04990275 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27385000 27420000 ID_0.01_1398 -0.041305 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27420000 27570000 ID_0.01_1399 -0.0499295 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27570000 27700000 ID_0.01_1400 -0.08094325 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27700000 27750000 ID_0.01_1401 -0.01535 . 1.0 1.0 1.0 0.0 0.0 0.0
+chr3R 27750000 27770000 ID_0.01_1402 0.01357725 . 1.0 nan 1.0 0.0 nan 0.0
diff -r 000000000000 -r 0c22e9361298 test-data/hicFindRestrictionSites/reference_genome.fasta
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicFindRestrictionSites/reference_genome.fasta Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,2 @@
+>chr1
+CTACGGTACGAACGTACGGTACGcgtaCGNAGTCATG
diff -r 000000000000 -r 0c22e9361298 test-data/hicFindRestrictionSites/restriction_sites.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicFindRestrictionSites/restriction_sites.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,4 @@
+chr1 5 9 . 0 +
+chr1 13 17 . 0 +
+chr1 18 22 . 0 +
+chr1 24 28 . 0 +
diff -r 000000000000 -r 0c22e9361298 test-data/hicHyperoptDetectLoops/hyperopt_results.txt
diff -r 000000000000 -r 0c22e9361298 test-data/hicHyperoptDetectLoops/loops.bedgraph
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicHyperoptDetectLoops/loops.bedgraph Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3 @@
+# Created by HiCExplorer hicHyperoptDetectLoops 3.7.6
+
+{'chrPrefixLoops': None, 'matrixFile': 'matrix.cool', 'maxLoopDistance': 1300000, 'maximumNumberOfLoops': 5, 'oet': 2.8714859798937415, 'p': 0.012586549394837264, 'peakWidth': 8, 'pit': 63.88073951584609, 'pp': 0.06112040451977812, 'proteinFile': '/tmp/tmpgf9pvov_/files/2/9/7/dataset_2978768e-39c0-4648-aa6e-8f81c54806cb.dat', 'resolution': 2, 'threads': 1, 'windowSize': 11}
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/hicInfo/hicInfo_output.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicInfo/hicInfo_output.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Matrix information file. Created with HiCExplorer's hicInfo version 3.7.6
+File: matrix_name.h5
+Size: 33,754
+Bin_length: 5000
+Sum of matrix: 37321.0
+Chromosomes:length: chr2L: 23011544 bp; chr2LHet: 368872 bp; chr2R: 21146708 bp; chr2RHet: 3288761 bp; chr3L: 24543557 bp; chr3LHet: 2555491 bp; chr3R: 27905053 bp; chr3RHet: 2517507 bp; chr4: 1351857 bp; chrM: 19517 bp; chrUextra: 29004656 bp; chrU: 10049037 bp; chrX: 22422827 bp; chrXHet: 204112 bp; chrYHet: 347038 bp;
+Non-zero elements: 69,213
+Minimum (non zero): 1
+Maximum: 8
+NaN bins: 0
diff -r 000000000000 -r 0c22e9361298 test-data/hicInfo_output.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicInfo_output.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,10 @@
+# Matrix information file. Created with HiCExplorer's hicInfo version 3.1
+File: matrix_name.h5
+Size: 3,383
+Bin_length: 50000
+Sum of matrix: 32798.5
+Chromosomes: chr2RHet, chr3RHet, chr2LHet, chr4, chrYHet, chr3L, chr2L, chrU, chrX, chrXHet, chr2R, chr3R, chrUextra, chrM, chr3LHet
+Non-zero elements: 45,981
+Minimum (non zero): 1
+Maximum: 68
+NaN bins: 664
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/hicInterIntraTAD/matrix.cool
Binary file test-data/hicInterIntraTAD/matrix.cool has changed
diff -r 000000000000 -r 0c22e9361298 test-data/hicInterIntraTAD/output.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicInterIntraTAD/output.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,22 @@
+# Created with HiCExplorer's hicInterIntraTAD version 3.7.6
+# Chromosome start end name score strand inter_left_sum inter_right_sum inter_left_density inter_right_density inter_left_number_of_contacts inter_right_number_of_contacts inter_left_number_of_contacts_nnz inter_right_number_of_contacts_nnz intra_sum intra_number_of_contacts intra_number_of_contacts_nnz intra_density inter_left_intra_ratio inter_right_intra_ratio inter_left_inter_right_intra_ratio
+chr2 17100000 18100000 ID_0.01_10 -0.230354 . 0 148.64979 0 1.0 0 90 0 90 289.00809 100 100 1.0 0.0 0.5143447368549441 0.5143447368549441
+chr2 18100000 19100000 ID_0.01_11 -0.5135365 . 162.11248 211.04027000000002 1.0 1.0 100 140 100 140 277.9356 100 100 1.0 0.5832735353081793 0.7593135604075189 1.3425870957156982
+chr2 19100000 20600000 ID_0.01_12 -0.4202525 . 223.14355000000003 150.01946 1.0 1.0 150 90 150 90 556.14405 225 225 1.0 0.4012333675061345 0.2697492852795962 0.6709826527857307
+chr2 20600000 21300000 ID_0.01_13 -0.9980865 . 171.34865000000002 274.46791 1.0 1.0 105 84 105 84 149.85761000000002 49 49 1.0 1.1434097340802378 1.8315246719869613 2.974934406067199
+chr2 21300000 22600000 ID_0.01_14 -0.859866 . 283.89281 768.8750100000001 1.0 1.0 91 208 91 208 24180.409890000003 169 169 1.0 0.01174061197851762 0.031797434927601224 0.043538046906118844
+chr2 22600000 24300000 ID_0.01_15 -0.281294 . 789.8040400000002 321.70053 1.0 1.0 221 238 221 238 659.9594400000001 289 289 1.0 1.1967463333807304 0.48745500178010936 1.6842013351608398
+chr2 24300000 25800000 ID_0.01_16 -1.0366175 . 340.44703 836.7906700000001 1.0 1.0 255 720 255 720 598.88844 225 225 1.0 0.5684648546564032 1.397239642828972 1.9657044974853752
+chr2 25800000 30700000 ID_0.01_17 -0.1471245 . 852.3657199999999 1593.09544 1.0 1.0 735 1421 735 1421 4153.28651 2401 2401 1.0 0.205226804832205 0.38357465495439663 0.5888014597866016
+chr2 30700000 33700000 ID_0.01_18 -1.0134455 . 1644.36207 315.02405 1.0 1.0 1470 240 1470 240 1873.0712400000002 900 900 1.0 0.877896171210231 0.16818583472564555 1.0460820059358766
+chr2 33700000 34600000 ID_0.01_19 -1.33809 . 351.38599999999997 204.32889000000003 1.0 1.0 270 153 270 153 245.00895 81 81 1.0 1.4341761800946453 0.8339650041355633 2.268141184230209
+chr2 34600000 36400000 ID_0.01_20 -0.6325015 . 213.88889999999998 379.5344099999999 1.0 1.0 162 288 162 288 770.63772 324 324 1.0 0.27754792485371726 0.4924939438469219 0.7700418687006392
+chr2 36400000 38100000 ID_0.01_21 -0.925006 . 399.4784 189.43412 1.0 1.0 306 136 306 136 635.96573 289 289 1.0 0.6281445385429809 0.2978684401752277 0.9260129787182088
+chr2 38100000 39000000 ID_0.01_22 -0.911804 . 209.82147 74.59004 1.0 1.0 153 45 153 45 229.67774999999997 81 81 1.0 0.9135472199636231 0.3247595380919571 1.2383067580555802
+chr2 39000000 39600000 ID_0.01_23 -0.474157 . 87.22966 120.04826999999999 1.0 1.0 54 72 54 72 114.23772 36 36 1.0 0.7635801905010009 1.05086367269935 1.8144438632003508
+chr2 39600000 40900000 ID_0.01_24 -0.483398 . 127.68592 348.8071999999999 1.0 1.0 78 247 78 247 447.58727999999996 169 169 1.0 0.28527602482358305 0.7793054351321154 1.0645814599556984
+chr2 40900000 42900000 ID_0.01_25 -0.7016145 . 363.61542999999995 330.73137999999994 1.0 1.0 260 240 260 240 912.1014799999999 400 400 1.0 0.3986567700778207 0.362603709403037 0.7612604794808577
+chr2 42900000 44200000 ID_0.01_26 -0.6584895 . 353.76149 305.35633 1.0 1.0 260 208 260 208 434.01493999999997 169 169 1.0 0.8150905819048533 0.7035617944396109 1.5186523763444641
+chr2 44200000 45900000 ID_0.01_27 -1.4067435 . 321.38521000000003 309.73695 1.0 1.0 221 221 221 221 667.4121100000001 289 289 1.0 0.4815393745252839 0.46408649971904153 0.9456258742443254
+chr2 45900000 47300000 ID_0.01_28 -0.656308 . 330.14417000000003 330.30287 1.0 1.0 238 238 238 238 509.86028 196 196 1.0 0.6475189045908814 0.647830166334981 1.2953490709258624
+chr2 47300000 49100000 ID_0.01_29 -0.0033885 . 330.30287 0 1.0 0 238 0 238 0 737.44951 324 324 1.0 0.4478989619235085 0.0 0.4478989619235085
diff -r 000000000000 -r 0c22e9361298 test-data/hicInterIntraTAD/plot.png
Binary file test-data/hicInterIntraTAD/plot.png has changed
diff -r 000000000000 -r 0c22e9361298 test-data/hicInterIntraTAD/untreated_R1_domains_chr1_chr2.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicInterIntraTAD/untreated_R1_domains_chr1_chr2.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,20 @@
+chr2 17100000 18100000 ID_0.01_10 -0.230354000000 . 17100000 18100000 51,160,44
+chr2 18100000 19100000 ID_0.01_11 -0.513536500000 . 18100000 19100000 31,120,180
+chr2 19100000 20600000 ID_0.01_12 -0.420252500000 . 19100000 20600000 51,160,44
+chr2 20600000 21300000 ID_0.01_13 -0.998086500000 . 20600000 21300000 31,120,180
+chr2 21300000 22600000 ID_0.01_14 -0.859866000000 . 21300000 22600000 51,160,44
+chr2 22600000 24300000 ID_0.01_15 -0.281294000000 . 22600000 24300000 31,120,180
+chr2 24300000 25800000 ID_0.01_16 -1.036617500000 . 24300000 25800000 51,160,44
+chr2 25800000 30700000 ID_0.01_17 -0.147124500000 . 25800000 30700000 31,120,180
+chr2 30700000 33700000 ID_0.01_18 -1.013445500000 . 30700000 33700000 51,160,44
+chr2 33700000 34600000 ID_0.01_19 -1.338090000000 . 33700000 34600000 31,120,180
+chr2 34600000 36400000 ID_0.01_20 -0.632501500000 . 34600000 36400000 51,160,44
+chr2 36400000 38100000 ID_0.01_21 -0.925006000000 . 36400000 38100000 31,120,180
+chr2 38100000 39000000 ID_0.01_22 -0.911804000000 . 38100000 39000000 51,160,44
+chr2 39000000 39600000 ID_0.01_23 -0.474157000000 . 39000000 39600000 31,120,180
+chr2 39600000 40900000 ID_0.01_24 -0.483398000000 . 39600000 40900000 51,160,44
+chr2 40900000 42900000 ID_0.01_25 -0.701614500000 . 40900000 42900000 31,120,180
+chr2 42900000 44200000 ID_0.01_26 -0.658489500000 . 42900000 44200000 51,160,44
+chr2 44200000 45900000 ID_0.01_27 -1.406743500000 . 44200000 45900000 31,120,180
+chr2 45900000 47300000 ID_0.01_28 -0.656308000000 . 45900000 47300000 51,160,44
+chr2 47300000 49100000 ID_0.01_29 -0.003388500000 . 47300000 49100000 31,120,180
\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/100kbtad_domains.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/100kbtad_domains.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,179 @@
+1 2600000 3800000 ID_0.01_1 -1.141686912309 . 2600000 3800000 31,120,180
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\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/10kbtad_domains.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/10kbtad_domains.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,769 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/50kbtad_domains.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/50kbtad_domains.bed Thu Dec 05 21:42:17 2024 +0000
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\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/ctcf_plot/two_files_plot_1.pdf
Binary file test-data/hicMergeDomains/ctcf_plot/two_files_plot_1.pdf has changed
diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/ctcf_sorted.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/ctcf_sorted.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,3403 @@
+chr1 805186 805436 . 0 . 59.5609057962358 -1 4.7429214225993 125
+chr1 840030 840280 . 0 . 83.6226028373057 -1 4.7429214225993 125
+chr1 848233 848483 . 0 . 21.7013707748217 -1 3.97409700379598 125
+chr1 873538 873788 . 0 . 19.5674784603862 -1 3.88351633069348 125
+chr1 886823 887073 . 0 . 22.5711320345953 -1 4.11312075496602 125
+chr1 911486 911736 . 0 . 31.509769734266 -1 4.27124510662348 125
+chr1 919601 919851 . 0 . 33.1859544183338 -1 4.7429214225993 125
+chr1 937269 937519 . 0 . 48.2208573550132 -1 4.7429214225993 125
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+chr1 968355 968605 . 0 . 27.9104706029461 -1 4.29525180136426 125
+chr1 999239 999489 . 0 . 67.3973204081303 -1 4.7429214225993 125
+chr1 1057530 1057780 . 0 . 88.0665088853952 -1 4.7429214225993 125
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\ No newline at end of file
diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/merged_list.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/merged_list.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1287 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/relationship.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/relationship.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1456 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeDomains/two_files_relation_ctcf.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeDomains/two_files_relation_ctcf.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,581 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeLoops/gm12878_10kb.bedgraph
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicMergeLoops/gm12878_10kb.bedgraph Thu Dec 05 21:42:17 2024 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeLoops/gm12878_25kb.bedgraph
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicMergeLoops/gm12878_all.bedgraph
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicPlotMatrix/plot2.pdf
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diff -r 000000000000 -r 0c22e9361298 test-data/hicPlotMatrix/plot3_pca.svg
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicPlotMatrix/plot3_pca.svg Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1008 @@
+
+
+
diff -r 000000000000 -r 0c22e9361298 test-data/hicPlotSVL/p_values.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicPlotSVL/p_values.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,4 @@
+# Created with HiCExplorer's hicPlotSVL 3.7.6
+# Short range vs long range contacts per chromosome, p-values of each distribution against each other distribution with Wilcoxon rank-sum
+# Short range contacts: <= 2000000
+0_small_test_matrix.h5 1_small_test_matrix.h5 1.0
diff -r 000000000000 -r 0c22e9361298 test-data/hicPlotSVL/plot.png
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diff -r 000000000000 -r 0c22e9361298 test-data/hicPlotSVL/ratios.txt
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicPlotSVL/ratios.txt Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,8 @@
+# Created with HiCExplorer's hicPlotSVL 3.7.6
+# Short range vs long range contacts per chromosome: raw data
+# Short range contacts: <= 2000000
+# 0_small_test_matrix.h5 1_small_test_matrix.h5
+# Chromosome Ratio Sum <= 2000000 Sum > 2000000 Ratio Sum <= 2000000 Sum > 2000000
+chr2L 4.7639676113360325 11767 2470 4.7639676113360325 11767 2470
+chr3L 4.8960869565217395 11261 2300 4.8960869565217395 11261 2300
+chr4
diff -r 000000000000 -r 0c22e9361298 test-data/hicQuickQC/QC.log
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicQuickQC/QC.log Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,29 @@
+
+File /tmp/tmpgf9pvov_/tmp/tmpovrpxt57.h5
+Sequenced reads 983
+Min rest. site distance 300
+Max library insert size 1000
+
+# count (percentage w.r.t. total sequenced reads)
+Pairs mappable, unique and high quality 300 (30.52)
+Hi-C contacts 215 (21.87)
+One mate unmapped 506 (51.48)
+One mate not unique 13 (1.32)
+Low mapping quality 164 (16.68)
+
+# count (percentage w.r.t. mappable, unique and high quality pairs)
+dangling end GATC (restriction sequence GATC) 1 (0.33)
+self ligation (removed) 0 (0.00)
+One mate not close to rest site 0 (0.00)
+same fragment 84 (28.00)
+self circle 33 (11.00)
+duplicated pairs 0 (0.00)
+
+# count (percentage w.r.t. total valid pairs used)
+inter chromosomal 24 (11.16)
+Intra short range (< 20kb) 61 (28.37)
+Intra long range (>= 20kb) 130 (60.47)
+Read pair type: inward pairs 42 (19.53)
+Read pair type: outward pairs 66 (30.70)
+Read pair type: left pairs 48 (22.33)
+Read pair type: right pairs 35 (16.28)
diff -r 000000000000 -r 0c22e9361298 test-data/hicTransform/obs_exp_norm.h5
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diff -r 000000000000 -r 0c22e9361298 test-data/hicValidateLocations/GSM935376_hg19_Gm12878_Smc3.narrowPeak
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicValidateLocations/GSM935376_hg19_Gm12878_Smc3.narrowPeak Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,5903 @@
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diff -r 000000000000 -r 0c22e9361298 test-data/hicValidateLocations/overlap_smc3_matched_locations
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicValidateLocations/overlap_smc3_matched_locations Thu Dec 05 21:42:17 2024 +0000
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diff -r 000000000000 -r 0c22e9361298 test-data/hicValidateLocations/overlap_smc3_statistics
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/hicValidateLocations/overlap_smc3_statistics Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,7 @@
+# HiCExplorer hicValidateLocations 3.7.6
+# Overlap of loop file /tmp/tmpgf9pvov_/files/2/9/c/dataset_29c1b4d3-8569-4405-ac40-08d8d9077d0d.dat with protein file /tmp/tmpgf9pvov_/files/4/8/3/dataset_48318067-0b54-463f-a9a7-9c751f3b7d1a.dat
+#
+Protein peaks: 3097
+Matched Loops: 530
+Total Loops: 1007
+Loops match protein: 0.5263157894736842
diff -r 000000000000 -r 0c22e9361298 test-data/li_32-33mb_interactions.bedgraph
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/li_32-33mb_interactions.bedgraph Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,2 @@
+X 3139841 3367043 X 2851659 3139841 28764.634828529033
+X 3139841 3367043 X 3139841 3367043 139691.503741355060
diff -r 000000000000 -r 0c22e9361298 test-data/li_viewpoint_32-33Mb.png
Binary file test-data/li_viewpoint_32-33Mb.png has changed
diff -r 000000000000 -r 0c22e9361298 test-data/li_viewpoint_32Mb.png
Binary file test-data/li_viewpoint_32Mb.png has changed
diff -r 000000000000 -r 0c22e9361298 test-data/multiNone_domains.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/multiNone_domains.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1402 @@
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+chr3R 12475000 12505000 ID_0.01_1221 -0.012502750000 . 12475000 12505000 31,120,180
+chr3R 12505000 12575000 ID_0.01_1222 -0.009183000000 . 12505000 12575000 51,160,44
+chr3R 12575000 12670000 ID_0.01_1223 -0.026389000000 . 12575000 12670000 31,120,180
+chr3R 12670000 12740000 ID_0.01_1224 -0.043900250000 . 12670000 12740000 51,160,44
+chr3R 12740000 12775000 ID_0.01_1225 -0.009504000000 . 12740000 12775000 31,120,180
+chr3R 12775000 12805000 ID_0.01_1226 -0.009823000000 . 12775000 12805000 51,160,44
+chr3R 12805000 12875000 ID_0.01_1227 -0.017688500000 . 12805000 12875000 31,120,180
+chr3R 12875000 12920000 ID_0.01_1228 -0.085944000000 . 12875000 12920000 51,160,44
+chr3R 12920000 13055000 ID_0.01_1229 -0.088056000000 . 12920000 13055000 31,120,180
+chr3R 13055000 13065000 ID_0.01_1230 0.025519750000 . 13055000 13065000 51,160,44
+chr3R 13065000 13165000 ID_0.01_1231 0.049500250000 . 13065000 13165000 31,120,180
+chr3R 13165000 13200000 ID_0.01_1232 0.043786750000 . 13165000 13200000 51,160,44
+chr3R 13200000 13225000 ID_0.01_1233 0.042425500000 . 13200000 13225000 31,120,180
+chr3R 13225000 13315000 ID_0.01_1234 0.054434500000 . 13225000 13315000 51,160,44
+chr3R 13315000 13360000 ID_0.01_1235 0.110922750000 . 13315000 13360000 31,120,180
+chr3R 13360000 13440000 ID_0.01_1236 0.016674250000 . 13360000 13440000 51,160,44
+chr3R 13440000 13495000 ID_0.01_1237 -0.061255250000 . 13440000 13495000 31,120,180
+chr3R 13495000 13545000 ID_0.01_1238 -0.082847750000 . 13495000 13545000 51,160,44
+chr3R 13545000 13590000 ID_0.01_1239 -0.061107250000 . 13545000 13590000 31,120,180
+chr3R 13590000 13725000 ID_0.01_1240 -0.039287250000 . 13590000 13725000 51,160,44
+chr3R 13725000 13830000 ID_0.01_1241 0.023938000000 . 13725000 13830000 31,120,180
+chr3R 13830000 13905000 ID_0.01_1242 0.007938750000 . 13830000 13905000 51,160,44
+chr3R 13905000 13965000 ID_0.01_1243 -0.012050750000 . 13905000 13965000 31,120,180
+chr3R 13965000 14070000 ID_0.01_1244 -0.029611750000 . 13965000 14070000 51,160,44
+chr3R 14070000 14120000 ID_0.01_1245 -0.068935250000 . 14070000 14120000 31,120,180
+chr3R 14120000 14240000 ID_0.01_1246 -0.038396750000 . 14120000 14240000 51,160,44
+chr3R 14240000 14380000 ID_0.01_1247 -0.052291500000 . 14240000 14380000 31,120,180
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+chr3R 14480000 14565000 ID_0.01_1249 -0.098399500000 . 14480000 14565000 31,120,180
+chr3R 14565000 14735000 ID_0.01_1250 -0.095740250000 . 14565000 14735000 51,160,44
+chr3R 14735000 14775000 ID_0.01_1251 -0.086167000000 . 14735000 14775000 31,120,180
+chr3R 14775000 14875000 ID_0.01_1252 -0.083724500000 . 14775000 14875000 51,160,44
+chr3R 14875000 14985000 ID_0.01_1253 -0.092619250000 . 14875000 14985000 31,120,180
+chr3R 14985000 15060000 ID_0.01_1254 -0.067210500000 . 14985000 15060000 51,160,44
+chr3R 15060000 15155000 ID_0.01_1255 -0.059893500000 . 15060000 15155000 31,120,180
+chr3R 15155000 15315000 ID_0.01_1256 0.062700250000 . 15155000 15315000 51,160,44
+chr3R 15315000 15370000 ID_0.01_1257 0.035499000000 . 15315000 15370000 31,120,180
+chr3R 15370000 15490000 ID_0.01_1258 0.004968750000 . 15370000 15490000 51,160,44
+chr3R 15490000 15515000 ID_0.01_1259 -0.049440750000 . 15490000 15515000 31,120,180
+chr3R 15515000 15560000 ID_0.01_1260 -0.045565500000 . 15515000 15560000 51,160,44
+chr3R 15560000 15595000 ID_0.01_1261 -0.059127500000 . 15560000 15595000 31,120,180
+chr3R 15595000 15645000 ID_0.01_1262 -0.075517000000 . 15595000 15645000 51,160,44
+chr3R 15645000 15745000 ID_0.01_1263 -0.036526250000 . 15645000 15745000 31,120,180
+chr3R 15745000 15830000 ID_0.01_1264 -0.012124500000 . 15745000 15830000 51,160,44
+chr3R 15830000 15865000 ID_0.01_1265 0.011944250000 . 15830000 15865000 31,120,180
+chr3R 15865000 15915000 ID_0.01_1266 0.035109750000 . 15865000 15915000 51,160,44
+chr3R 15915000 15935000 ID_0.01_1267 0.065872500000 . 15915000 15935000 31,120,180
+chr3R 15935000 16115000 ID_0.01_1268 0.066610750000 . 15935000 16115000 51,160,44
+chr3R 16115000 16155000 ID_0.01_1269 -0.087499000000 . 16115000 16155000 31,120,180
+chr3R 16155000 16295000 ID_0.01_1270 -0.053086500000 . 16155000 16295000 51,160,44
+chr3R 16295000 16350000 ID_0.01_1271 0.055833750000 . 16295000 16350000 31,120,180
+chr3R 16350000 16445000 ID_0.01_1272 0.028535250000 . 16350000 16445000 51,160,44
+chr3R 16445000 16565000 ID_0.01_1273 -0.094774000000 . 16445000 16565000 31,120,180
+chr3R 16565000 16670000 ID_0.01_1274 -0.072765750000 . 16565000 16670000 51,160,44
+chr3R 16670000 16700000 ID_0.01_1275 -0.067027000000 . 16670000 16700000 31,120,180
+chr3R 16700000 16770000 ID_0.01_1276 -0.052485750000 . 16700000 16770000 51,160,44
+chr3R 16770000 16805000 ID_0.01_1277 -0.036296000000 . 16770000 16805000 31,120,180
+chr3R 16805000 16910000 ID_0.01_1278 -0.036527500000 . 16805000 16910000 51,160,44
+chr3R 16910000 17105000 ID_0.01_1279 -0.114692750000 . 16910000 17105000 31,120,180
+chr3R 17105000 17215000 ID_0.01_1280 -0.054786750000 . 17105000 17215000 51,160,44
+chr3R 17215000 17315000 ID_0.01_1281 -0.079377750000 . 17215000 17315000 31,120,180
+chr3R 17315000 17425000 ID_0.01_1282 -0.017845000000 . 17315000 17425000 51,160,44
+chr3R 17425000 17490000 ID_0.01_1283 -0.072665000000 . 17425000 17490000 31,120,180
+chr3R 17490000 17520000 ID_0.01_1284 -0.049994250000 . 17490000 17520000 51,160,44
+chr3R 17520000 17600000 ID_0.01_1285 -0.029002750000 . 17520000 17600000 31,120,180
+chr3R 17600000 17630000 ID_0.01_1286 -0.018032000000 . 17600000 17630000 51,160,44
+chr3R 17630000 17670000 ID_0.01_1287 0.002561250000 . 17630000 17670000 31,120,180
+chr3R 17670000 17700000 ID_0.01_1288 -0.003981250000 . 17670000 17700000 51,160,44
+chr3R 17700000 17715000 ID_0.01_1289 -0.020505750000 . 17700000 17715000 31,120,180
+chr3R 17715000 17745000 ID_0.01_1290 -0.016624000000 . 17715000 17745000 51,160,44
+chr3R 17745000 17835000 ID_0.01_1291 -0.031856750000 . 17745000 17835000 31,120,180
+chr3R 17835000 17880000 ID_0.01_1292 -0.020281250000 . 17835000 17880000 51,160,44
+chr3R 17880000 17915000 ID_0.01_1293 -0.042281000000 . 17880000 17915000 31,120,180
+chr3R 17915000 17935000 ID_0.01_1294 -0.052102250000 . 17915000 17935000 51,160,44
+chr3R 17935000 18030000 ID_0.01_1295 -0.048945250000 . 17935000 18030000 31,120,180
+chr3R 18030000 18120000 ID_0.01_1296 -0.075844250000 . 18030000 18120000 51,160,44
+chr3R 18120000 18180000 ID_0.01_1297 -0.083323500000 . 18120000 18180000 31,120,180
+chr3R 18180000 18310000 ID_0.01_1298 -0.096844750000 . 18180000 18310000 51,160,44
+chr3R 18310000 18395000 ID_0.01_1299 -0.069608000000 . 18310000 18395000 31,120,180
+chr3R 18395000 18445000 ID_0.01_1300 -0.067297750000 . 18395000 18445000 51,160,44
+chr3R 18445000 18485000 ID_0.01_1301 -0.043970250000 . 18445000 18485000 31,120,180
+chr3R 18485000 18525000 ID_0.01_1302 -0.053395500000 . 18485000 18525000 51,160,44
+chr3R 18525000 18690000 ID_0.01_1303 -0.114692750000 . 18525000 18690000 31,120,180
+chr3R 18690000 18735000 ID_0.01_1304 -0.075545000000 . 18690000 18735000 51,160,44
+chr3R 18735000 18885000 ID_0.01_1305 -0.048598500000 . 18735000 18885000 31,120,180
+chr3R 18885000 19005000 ID_0.01_1306 -0.099724250000 . 18885000 19005000 51,160,44
+chr3R 19005000 19100000 ID_0.01_1307 -0.105493500000 . 19005000 19100000 31,120,180
+chr3R 19100000 19185000 ID_0.01_1308 -0.080215000000 . 19100000 19185000 51,160,44
+chr3R 19185000 19255000 ID_0.01_1309 -0.111752500000 . 19185000 19255000 31,120,180
+chr3R 19255000 19285000 ID_0.01_1310 -0.078042250000 . 19255000 19285000 51,160,44
+chr3R 19285000 19380000 ID_0.01_1311 -0.069411000000 . 19285000 19380000 31,120,180
+chr3R 19380000 19460000 ID_0.01_1312 -0.055802250000 . 19380000 19460000 51,160,44
+chr3R 19460000 19565000 ID_0.01_1313 -0.011615250000 . 19460000 19565000 31,120,180
+chr3R 19565000 19695000 ID_0.01_1314 -0.089052750000 . 19565000 19695000 51,160,44
+chr3R 19695000 19740000 ID_0.01_1315 -0.105211250000 . 19695000 19740000 31,120,180
+chr3R 19740000 19935000 ID_0.01_1316 -0.111752500000 . 19740000 19935000 51,160,44
+chr3R 19935000 20020000 ID_0.01_1317 -0.106310750000 . 19935000 20020000 31,120,180
+chr3R 20020000 20050000 ID_0.01_1318 -0.083403000000 . 20020000 20050000 51,160,44
+chr3R 20050000 20150000 ID_0.01_1319 -0.090917500000 . 20050000 20150000 31,120,180
+chr3R 20150000 20220000 ID_0.01_1320 -0.022793500000 . 20150000 20220000 51,160,44
+chr3R 20220000 20335000 ID_0.01_1321 -0.034021000000 . 20220000 20335000 31,120,180
+chr3R 20335000 20375000 ID_0.01_1322 -0.103608250000 . 20335000 20375000 51,160,44
+chr3R 20375000 20455000 ID_0.01_1323 -0.114692750000 . 20375000 20455000 31,120,180
+chr3R 20455000 20615000 ID_0.01_1324 -0.107523250000 . 20455000 20615000 51,160,44
+chr3R 20615000 20710000 ID_0.01_1325 -0.099168000000 . 20615000 20710000 31,120,180
+chr3R 20710000 20720000 ID_0.01_1326 -0.073518750000 . 20710000 20720000 51,160,44
+chr3R 20720000 20765000 ID_0.01_1327 -0.070509500000 . 20720000 20765000 31,120,180
+chr3R 20765000 20860000 ID_0.01_1328 -0.086298500000 . 20765000 20860000 51,160,44
+chr3R 20860000 20900000 ID_0.01_1329 -0.012765250000 . 20860000 20900000 31,120,180
+chr3R 20900000 20935000 ID_0.01_1330 -0.021853250000 . 20900000 20935000 51,160,44
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+chr3R 20965000 21085000 ID_0.01_1332 -0.061393500000 . 20965000 21085000 51,160,44
+chr3R 21085000 21175000 ID_0.01_1333 -0.094928000000 . 21085000 21175000 31,120,180
+chr3R 21175000 21220000 ID_0.01_1334 -0.041395500000 . 21175000 21220000 51,160,44
+chr3R 21220000 21320000 ID_0.01_1335 -0.050287250000 . 21220000 21320000 31,120,180
+chr3R 21320000 21335000 ID_0.01_1336 -0.086029000000 . 21320000 21335000 51,160,44
+chr3R 21335000 21390000 ID_0.01_1337 -0.061001750000 . 21335000 21390000 31,120,180
+chr3R 21390000 21475000 ID_0.01_1338 -0.065676500000 . 21390000 21475000 51,160,44
+chr3R 21475000 21615000 ID_0.01_1339 -0.093298500000 . 21475000 21615000 31,120,180
+chr3R 21615000 21730000 ID_0.01_1340 -0.081974000000 . 21615000 21730000 51,160,44
+chr3R 21730000 21820000 ID_0.01_1341 0.070250750000 . 21730000 21820000 31,120,180
+chr3R 21820000 21845000 ID_0.01_1342 -0.001459750000 . 21820000 21845000 51,160,44
+chr3R 21845000 21950000 ID_0.01_1343 0.036051500000 . 21845000 21950000 31,120,180
+chr3R 21950000 21990000 ID_0.01_1344 0.002742000000 . 21950000 21990000 51,160,44
+chr3R 21990000 22075000 ID_0.01_1345 0.007133750000 . 21990000 22075000 31,120,180
+chr3R 22075000 22220000 ID_0.01_1346 -0.087915000000 . 22075000 22220000 51,160,44
+chr3R 22220000 22270000 ID_0.01_1347 0.061450500000 . 22220000 22270000 31,120,180
+chr3R 22270000 22310000 ID_0.01_1348 -0.025753250000 . 22270000 22310000 51,160,44
+chr3R 22310000 22380000 ID_0.01_1349 -0.049464750000 . 22310000 22380000 31,120,180
+chr3R 22380000 22500000 ID_0.01_1350 -0.055847000000 . 22380000 22500000 51,160,44
+chr3R 22500000 22520000 ID_0.01_1351 -0.063110500000 . 22500000 22520000 31,120,180
+chr3R 22520000 22605000 ID_0.01_1352 -0.062648000000 . 22520000 22605000 51,160,44
+chr3R 22605000 22695000 ID_0.01_1353 -0.011252000000 . 22605000 22695000 31,120,180
+chr3R 22695000 22780000 ID_0.01_1354 -0.089033000000 . 22695000 22780000 51,160,44
+chr3R 22780000 22885000 ID_0.01_1355 -0.040500250000 . 22780000 22885000 31,120,180
+chr3R 22885000 22985000 ID_0.01_1356 -0.056834750000 . 22885000 22985000 51,160,44
+chr3R 22985000 23110000 ID_0.01_1357 -0.023781500000 . 22985000 23110000 31,120,180
+chr3R 23110000 23185000 ID_0.01_1358 -0.100625000000 . 23110000 23185000 51,160,44
+chr3R 23185000 23195000 ID_0.01_1359 -0.002947250000 . 23185000 23195000 31,120,180
+chr3R 23195000 23415000 ID_0.01_1360 -0.002757750000 . 23195000 23415000 51,160,44
+chr3R 23415000 23560000 ID_0.01_1361 -0.090027000000 . 23415000 23560000 31,120,180
+chr3R 23560000 23770000 ID_0.01_1362 -0.104602000000 . 23560000 23770000 51,160,44
+chr3R 23770000 23815000 ID_0.01_1363 -0.111910500000 . 23770000 23815000 31,120,180
+chr3R 23815000 23920000 ID_0.01_1364 -0.066076500000 . 23815000 23920000 51,160,44
+chr3R 23920000 24030000 ID_0.01_1365 -0.042184750000 . 23920000 24030000 31,120,180
+chr3R 24030000 24160000 ID_0.01_1366 -0.055795750000 . 24030000 24160000 51,160,44
+chr3R 24160000 24205000 ID_0.01_1367 -0.015467250000 . 24160000 24205000 31,120,180
+chr3R 24205000 24345000 ID_0.01_1368 -0.032601500000 . 24205000 24345000 51,160,44
+chr3R 24345000 24375000 ID_0.01_1369 -0.062306500000 . 24345000 24375000 31,120,180
+chr3R 24375000 24450000 ID_0.01_1370 -0.074939500000 . 24375000 24450000 51,160,44
+chr3R 24450000 24625000 ID_0.01_1371 -0.098360750000 . 24450000 24625000 31,120,180
+chr3R 24625000 24745000 ID_0.01_1372 -0.031713750000 . 24625000 24745000 51,160,44
+chr3R 24745000 24885000 ID_0.01_1373 -0.085896250000 . 24745000 24885000 31,120,180
+chr3R 24885000 24995000 ID_0.01_1374 -0.093237250000 . 24885000 24995000 51,160,44
+chr3R 24995000 25090000 ID_0.01_1375 -0.058978500000 . 24995000 25090000 31,120,180
+chr3R 25090000 25165000 ID_0.01_1376 0.036742250000 . 25090000 25165000 51,160,44
+chr3R 25165000 25330000 ID_0.01_1377 -0.046246500000 . 25165000 25330000 31,120,180
+chr3R 25330000 25405000 ID_0.01_1378 -0.083033250000 . 25330000 25405000 51,160,44
+chr3R 25405000 25570000 ID_0.01_1379 -0.005462250000 . 25405000 25570000 31,120,180
+chr3R 25570000 25580000 ID_0.01_1380 -0.046540750000 . 25570000 25580000 51,160,44
+chr3R 25580000 25730000 ID_0.01_1381 -0.018715750000 . 25580000 25730000 31,120,180
+chr3R 25730000 25880000 ID_0.01_1382 -0.008588750000 . 25730000 25880000 51,160,44
+chr3R 25880000 25990000 ID_0.01_1383 -0.105816250000 . 25880000 25990000 31,120,180
+chr3R 25990000 26050000 ID_0.01_1384 -0.090403000000 . 25990000 26050000 51,160,44
+chr3R 26050000 26180000 ID_0.01_1385 -0.093531500000 . 26050000 26180000 31,120,180
+chr3R 26180000 26275000 ID_0.01_1386 -0.114692750000 . 26180000 26275000 51,160,44
+chr3R 26275000 26330000 ID_0.01_1387 -0.100273500000 . 26275000 26330000 31,120,180
+chr3R 26330000 26490000 ID_0.01_1388 -0.092304000000 . 26330000 26490000 51,160,44
+chr3R 26490000 26565000 ID_0.01_1389 0.062796500000 . 26490000 26565000 31,120,180
+chr3R 26565000 26640000 ID_0.01_1390 -0.019744750000 . 26565000 26640000 51,160,44
+chr3R 26640000 26715000 ID_0.01_1391 -0.074307250000 . 26640000 26715000 31,120,180
+chr3R 26715000 26870000 ID_0.01_1392 -0.049789000000 . 26715000 26870000 51,160,44
+chr3R 26870000 27045000 ID_0.01_1393 -0.024990500000 . 26870000 27045000 31,120,180
+chr3R 27045000 27155000 ID_0.01_1394 -0.074189000000 . 27045000 27155000 51,160,44
+chr3R 27155000 27185000 ID_0.01_1395 -0.006099250000 . 27155000 27185000 31,120,180
+chr3R 27185000 27250000 ID_0.01_1396 -0.012810250000 . 27185000 27250000 51,160,44
+chr3R 27250000 27385000 ID_0.01_1397 -0.049902750000 . 27250000 27385000 31,120,180
+chr3R 27385000 27420000 ID_0.01_1398 -0.041305000000 . 27385000 27420000 51,160,44
+chr3R 27420000 27570000 ID_0.01_1399 -0.049929500000 . 27420000 27570000 31,120,180
+chr3R 27570000 27700000 ID_0.01_1400 -0.080943250000 . 27570000 27700000 51,160,44
+chr3R 27700000 27750000 ID_0.01_1401 -0.015350000000 . 27700000 27750000 31,120,180
+chr3R 27750000 27770000 ID_0.01_1402 0.013577250000 . 27750000 27770000 51,160,44
diff -r 000000000000 -r 0c22e9361298 test-data/raw_qc_report
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/raw_qc_report Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,29 @@
+
+File matrix.cool
+Sequenced reads 983
+Min rest. site distance 300
+Max library insert size 1000
+
+# count (percentage w.r.t. total sequenced reads)
+Pairs mappable, unique and high quality 300 (30.52)
+Hi-C contacts 215 (21.87)
+One mate unmapped 506 (51.48)
+One mate not unique 13 (1.32)
+Low mapping quality 164 (16.68)
+
+# count (percentage w.r.t. mappable, unique and high quality pairs)
+dangling end GATC (restriction sequence GATC) 1 (0.33)
+self ligation (removed) 0 (0.00)
+One mate not close to rest site 0 (0.00)
+same fragment 84 (28.00)
+self circle 33 (11.00)
+duplicated pairs 0 (0.00)
+
+# count (percentage w.r.t. total valid pairs used)
+inter chromosomal 24 (11.16)
+Intra short range (< 20kb) 61 (28.37)
+Intra long range (>= 20kb) 130 (60.47)
+Read pair type: inward pairs 42 (19.53)
+Read pair type: outward pairs 66 (30.70)
+Read pair type: left pairs 48 (22.33)
+Read pair type: right pairs 35 (16.28)
diff -r 000000000000 -r 0c22e9361298 test-data/raw_qc_report_micro-c
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/raw_qc_report_micro-c Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,24 @@
+
+File matrix.cool
+Sequenced reads 983
+Max library insert size 1000
+
+# count (percentage w.r.t. total sequenced reads)
+Pairs mappable, unique and high quality 300 (30.52)
+Hi-C contacts 215 (21.87)
+One mate unmapped 506 (51.48)
+One mate not unique 13 (1.32)
+Low mapping quality 164 (16.68)
+
+# count (percentage w.r.t. mappable, unique and high quality pairs)
+same fragment 85 (28.33)
+duplicated pairs 0 (0.00)
+
+# count (percentage w.r.t. total valid pairs used)
+inter chromosomal 24 (11.16)
+Intra short range (< 20kb) 61 (28.37)
+Intra long range (>= 20kb) 130 (60.47)
+Read pair type: inward pairs 42 (19.53)
+Read pair type: outward pairs 66 (30.70)
+Read pair type: left pairs 48 (22.33)
+Read pair type: right pairs 35 (16.28)
diff -r 000000000000 -r 0c22e9361298 test-data/regions.bed
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/regions.bed Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,2 @@
+chrX 10000000 15000000
+chrX 18000000 22000000
diff -r 000000000000 -r 0c22e9361298 test-data/small_test_R1_unsorted.sam
--- /dev/null Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/small_test_R1_unsorted.sam Thu Dec 05 21:42:17 2024 +0000
@@ -0,0 +1,1000 @@
+@HD VN:1.0 SO:unsorted
+@SQ SN:chr2L LN:23011544
+@SQ SN:chr2LHet LN:368872
+@SQ SN:chr2R LN:21146708
+@SQ SN:chr2RHet LN:3288761
+@SQ SN:chr3L LN:24543557
+@SQ SN:chr3LHet LN:2555491
+@SQ SN:chr3R LN:27905053
+@SQ SN:chr3RHet LN:2517507
+@SQ SN:chr4 LN:1351857
+@SQ SN:chrM LN:19517
+@SQ SN:chrUextra LN:29004656
+@SQ SN:chrU LN:10049037
+@SQ SN:chrX LN:22422827
+@SQ SN:chrXHet LN:204112
+@SQ SN:chrYHet LN:347038
+@PG ID:bowtie2 PN:bowtie2 VN:2.0.5
+HWI-ST1180:36:C0TU1ACXX:1:1101:1121:2099 4 * 0 0 * * 0 0 TGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN (8;@############################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1187:2101 4 * 0 0 * * 0 0 TTATNTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@?########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1158:2104 4 * 0 0 * * 0 0 AAAANAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<>?@??################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1242:2118 4 * 0 0 * * 0 0 GGCTNGCAACTGAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<?@?################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1122:2120 4 * 0 0 * * 0 0 CCCANANANNANNTNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<==AAAAABBCBACBBCB7AA=@B#2@?:>1@@################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1455:2136 4 * 0 0 * * 0 0 AAGCACGGGTAAGCTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<:?@@@@?############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1250:2140 4 * 0 0 * * 0 0 CGCCGTTGACCATCCAGCAGCNNNNNNNNNTGNNNNNNNNNNNNNNNNNN <<<@@????@?????>@????############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1382:2140 4 * 0 0 * * 0 0 TTTATTACCAGACTTGACCTCNNNNNNNNNGANNNNNNNNNNNNNNNNNN <<;@?@?@@??<=?@1:>?>?############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1409:2144 4 * 0 0 * * 0 0 TAATTGCATTTATTTTCAACATNANNAAGTGCCNNNNNNNNNNNNNNNGN <<<@@@?@?@@@@@@@@@???@#3##3:>@??@################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1439:2146 4 * 0 0 * * 0 0 CATTTTTTCAAACAGCTTTGAANGNNATGTTAGNNNNNNNNNNNNNNNAT ;19@@@@?9=@@16838@@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1289:2147 4 * 0 0 * * 0 0 ATAAATAATAAACTTACACAAATCNAGCTAGCTTNNNNNNNNNNNNNNGT CCCFFFFFHHHHHIJJJJJJJJJJ#3AHIIJJJJ################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1316:2155 4 * 0 0 * * 0 0 AAAGTCTCAAAAACCATATTTCAAACTTTTTAAAANNAGAANNNNNNTGA 8;3C@<4*9?4? AS:i:94 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:29T20 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1334:2171 16 chrUextra 5539873 1 50M * 0 0 TGAAGCCGTTATATCTTTTGACTTCAGAAAGGAATGAATTTATTTGGAAG @BIIHGH@IIHGGGDEIHECHGH@EGIIGIIHGFBFGBHHHDFFFDDCC@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1355:2173 16 chr3R 20374547 28 17S33M * 0 0 AAAATATAATTAAAGCTACCTTGCTGTACAGTGCCTCCGTCCAGGACACA JJJJIJIJJJIJHGDHF?JIJJIJIJJHJJJIJJIHJHGHHHFFFDDBCC AS:i:66 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:33 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1419:2175 0 chr3L 17833657 44 50M * 0 0 GTCGCTGGGTAAATGGAAGCCAAGGCGCTGGGAGCGCTCAAAGAGCTCCT CCCFFFFFHFHHHIJJJJJIJJJJJIJIIJJJEHBHEHJIIIGGGEHIJF AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1481:2183 0 chr3L 7371102 1 50M * 0 0 CATATAAAAATAAAAAATTAAAACAATATAGAATTTTAATAATACAACAC CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJI AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1324:2186 0 chr2RHet 626205 1 50M * 0 0 CAGATTGAGAAGTTTGGCAGATATAACTTCTACCGATTCTCCTTTTACTG ?:==?=2BDDDDDEE?A:3C7AE@@>CFAGIIJJJDGGGJJ:AEAB7@BAEE AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1258:2200 0 chrUextra 19166562 1 50M * 0 0 GAAGCGCAATAAACATGTGAAAATACTATTGACAACTTGCATGCATATTT CCCFFFFFHHHHHJJJJJJJIJJJJJJJJJJGJJJJJJIJIJJJJJHIJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1329:2201 0 chr3R 63113 44 50M * 0 0 ATTGCAAAGAAGACTTTTCGGAACGCATCATTTGGATAGAATAAAAACTG @@@FFDDFHHHHFHIIIIJJJIIIIIIIJJJJJJIDHAHEHIIGGGIIJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1470:2201 0 chr2R 8270967 9 27M23S * 0 0 TCTTATCAAAGTTGATTTGAGTAAGCTAGCTTGTCTATCTCAGAATATAT @@@ABBDDFFBC?EF:2CCFB#28@########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1559:2116 4 * 0 0 * * 0 0 TACANAATATGTTNTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<??@?@@@@@################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1626:2121 4 * 0 0 * * 0 0 ATTGNCGGACATGCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ;;;@#2:8@??@@<;=@################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1739:2122 4 * 0 0 * * 0 0 TTCCNATCCGCTGTCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4==@@?@?@@@?@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1507:2123 4 * 0 0 * * 0 0 GCTTNAAGCTAGCTTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@>?@@@??@?@@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1661:2125 4 * 0 0 * * 0 0 TTATNAGCTTAATAAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN (07=#2(<;=??=>?>=??############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1710:2125 4 * 0 0 * * 0 0 ATTTNTGTTTTTTTAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@@@?@?@??@@??############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1529:2130 4 * 0 0 * * 0 0 ATCTAACATGATTTGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@@@@@@???@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1646:2136 4 * 0 0 * * 0 0 AGATGTCAGGAATATTTTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<?8DBA7;?; AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1741:2171 0 chr2L 4706728 44 50M * 0 0 AACTACGCCTTCAACACTGCCAAAAATATCACACGAACTTCACACTCTAC CCCFFFFFHHHGGJJJJJJJJJJJJJJJJJJIJIJJJJIJJJJIIJJIJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1518:2174 0 chrX 16298192 44 50M * 0 0 AGAGTCGACTAGGCGATACCCTATAATTACTTCTTGTTTATTTGATATGT BCCFDDFFHHHHHIJIIJJJJJIIIIIJIJJJIJJIFHIDHIJIGGIGHD AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:4C45 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1719:2175 0 chrX 8719126 12 21S29M * 0 0 AATATATATTTACATAAAGCTCGCTTTTTTTGTTTTGTCTCTTTCGTCAC BCCFFFFFHHHHHJJJJIJJJJIJJJJJJJJJGIJJGIIGGIJJIJIIJJ AS:i:58 XS:i:42 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:29 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1578:2181 0 chr3L 5685511 44 50M * 0 0 CAGTCATTTGGGGGCACAACAAAAACAAGGCAGAAAAGGAAAAACTCGCT CCCFFFFFHHHHHJJJJJJJJJJJJJJJIIJIJIJJJJJJJJJJJJJJHH AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1686:2183 0 chr3R 6799587 44 50M * 0 0 ATCTTTTCAAAGCTGTTGAACACAACTTGTGCTTTCTTAAATTCTTCAGC CCCFFFFFHHHHHJJIJJJJJJJJJJJJJHJJJJJIJJJJJJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1648:2194 0 chr3LHet 1596056 1 48M2S * 0 0 GCAAAGTTTGCAGGTGGAAGCACCGCAAATCATCACGTACGAAAAGGTAG CCCFFFDEHHHHHJFHHIJJIJJJIJIJIJJJJJGGIGHIJJJJJIICGH AS:i:96 XS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:48 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1594:2201 16 chrX 3651327 1 50M * 0 0 TTTCAGGGTTTGGTTTTATTCCATCTGGTGTTAGAACATGTCCTAAAAAT JJJJIGIGJJIIIJJJIDJIJIIJJJJJJJJJJJJIJHHHFHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1728:2202 16 chr3L 19517901 42 41M9S * 0 0 CACTCTTGAAACATTTCCAACATTTGTTGTAAGTGTAAGCTAGCTTTAAA B9HGIIHHGG?IIJIIGIIFHGIJJJJJJJJIGJJJIHGHHGFFFFFCCC AS:i:82 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:41 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1669:2204 0 chr2RHet 355063 31 50M * 0 0 CGTAGCAATATAATAAAATAAAATAATTTTTAAAAATTCGCGCCCTGACT ?@=DB?DFDFFHFIGIIIIIIIIIIGHIGHDHIIIIIIGEDDHGIGHGCB AS:i:100 XS:i:93 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1705:2204 0 chr2L 6407817 44 50M * 0 0 ATAGGTGGACCATGCTATTTACCATAAAACCCTTATTATTATAAGTAAAT @@CFFDDFHHHHHJ;FHIJIJJJJJJJJJJGHGJIIJEIIIGGIJIIJID AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1632:2207 0 chrUextra 11698104 1 50M * 0 0 TCTAACACCAGATGGAATAAAACCAAACCCTGAAAAAATTGAAGCCATTC <@@FFEFFDDHHGHGEHGGIIIIIIIIIIGGHIIIIIIGIBGBFD@BFHI AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1519:2211 0 chr2R 7889040 36 13S37M * 0 0 CCATCCGGAAGCTAGCTTAAATGGCTAGTCATAAAATTGTTTCGGCTGTT CCCFFFFFHHHHHJJJJJIJJJJJJJJJHIJJJJJJJJGHIJIIIEGGBF AS:i:74 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:37 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1611:2212 0 chrX 3653233 1 50M * 0 0 GACTTTTGTGGCTTATCAGAGAAATTTTGTTTTTGGACATGTGTACTTGT @@@FFFFFFHHFHJGIJGGHGIGHGGIJGCFHIJJIJJCAADHBDGGHGD AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1566:2218 0 chr3L 2171217 44 50M * 0 0 ATTAAAATACAAATATCTAGAAATTCGCGAGCGCTTAAGTTGACATAACA CCCFFFFFHHHHHJJJJJJJJJJJJJJJJIIIJJJJJJJJJJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1665:2218 16 chr2L 15528359 41 10S40M * 0 0 GAAAGCTAGCTTAATTATTTCTTAAAAATATAACACAATTTTTTTTACGA CIGEIHGGDBBEJIGF=1??@@################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1984:2124 4 * 0 0 * * 0 0 ACATNGTATTTTGTATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ;;;8#22<@????@@><@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1834:2130 4 * 0 0 * * 0 0 CTACATATAATAATACATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<;@96@@@84268688@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1946:2133 4 * 0 0 * * 0 0 GATTCATTTGTTACACTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ;<<=9=?4>=>>????################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1810:2136 4 * 0 0 * * 0 0 ATCCATCAAAAACTACACGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@?@@@@@@??@@@@@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1920:2137 4 * 0 0 * * 0 0 CAGTGACAGATTTCCTTTGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@@@@@@@@@@?@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1961:2141 4 * 0 0 * * 0 0 CAAAGACAGTATCCACATTTATNNNNNNNAAANNNNNNNNNNNNNNNNNN <<@??@???????############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1994:2145 4 * 0 0 * * 0 0 GCCTGCGAGTTCTCAAATCTAGNTNNACACTTANNNNNNNNNNNNNNNAN <<FFDGAFDFHI@BFFEFEG9EB;FBGGCDE1?FBA?0?99B AS:i:71 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:3A35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1751:2222 16 chr3L 1680406 44 50M * 0 0 AGTTGCTGCTGGCAAGGATTTGCACTGCGAGAAAAGAGTGGTAACGAATG JJJIIJIJJJJJJJJJIJJJJJHGJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:10A39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1795:2222 16 chr3L 23164203 1 50M * 0 0 ATTTACTAGGTTTTAATGTAATTTTTGATTTTAAAATAATTTGACCGTTT JJJJIJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJIHHHHHHDDFFFCCB AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1882:2228 0 chrUextra 12720392 1 50M * 0 0 TTTCCTTACTTACTTGATTAAATGGAACGTGTATCATTTCCTAGCCATTA @CCFFDFDDHHHHJIJIEIGGIECEIIJJHGDFD>@G4 AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1975:2233 16 chr3R 22702988 44 50M * 0 0 TGATATCGTCTAATTGGGTCTGTGTGCGCATAAATGTCGTAAAATTAATT IJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1933:2239 16 chr2L 16865091 44 50M * 0 0 GCTTTGTCTATATATATTTAATAATGGTTTCATTGACCCATTCATAAATA JJJJJJJJJIJIGIIJJJJJIJJJIJJJJJIIGFIHJHHHHGFFFFFCCC AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:14A35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1859:2240 0 chr2R 15045817 28 34M16S * 0 0 GGAAAATCGATTTCTATGAATATATGTAGAAGCTAGCTTAACGCACGAAT CCCFFFDFHHHFGJJJJGGGGCHGIIIGIIJGIGIIJGGIJFHJIIGBHD AS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1897:2241 0 chr2R 14691278 28 16S34M * 0 0 TATTGGACTTTAATCTAGCTTAGTAATTGTATAATTTGTTTAGTTTAATT CCCFFFFFHHHHHJGJJJJJJJJFEHJJJGIGHHIJJGIJJJJGHIIIIJ AS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1831:2243 16 chr2L 21232187 44 50M * 0 0 TAGAACTGAAACTGTGCCACATTTTTCAGATTTCTCTCATATTCGCTAAA HIHGGGHDHDGIIGHIGFBGGIGDHAIHCGIIHHBIIGHFHHFDFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1956:2244 16 chr2R 17928859 44 50M * 0 0 GATGCCAGGTTTTTGTAAACAAAACGAGTTTTGCCTGCGGGCCGACAGAA HHEDIGGJIJJIIIHEIHFGIHHFEIGJIJJJIJIJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1994:2247 16 chr2L 16066510 28 16S34M * 0 0 GAGAGAAGGGGAAGCTAGCTTCTTCTACACTCTACGCAAATCATCAGTGC GIIIGIGJJJIJIIJIIIJJJIJIIHHHEJJJJIIJIHHHGHFFFFD@C@ AS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2232:2107 4 * 0 0 * * 0 0 TTCTNATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@########################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2155:2110 4 * 0 0 * * 0 0 AAACNCGCATNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<;@??@##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2186:2119 4 * 0 0 * * 0 0 GCTANACGCAATTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@?@??@?############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2008:2127 4 * 0 0 * * 0 0 CGCTNCCGCCACCGTGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@@@@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2114:2132 4 * 0 0 * * 0 0 TAAACTGGCGCTTCCTTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ;:<;@?@########################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2024:2133 4 * 0 0 * * 0 0 TGAACTGTTTTTCCCTGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<>?<=<@????@@<@???>???############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2199:2147 4 * 0 0 * * 0 0 TATTATTTGCGCTGGTGGTGCTNCNNCTGAACTNNNNNNNNNNNNNNNAC <<<@@@@@@@?@@@@=?@@???#1##11=????################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2109:2152 4 * 0 0 * * 0 0 AACTTAGAACATATTTATTTTGAGNTTATTAATTNNNNCTNNNNNNNTTT CCCFFFFDHHHHFHJJJIJJJJHI#3ACGIGFIG################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2031:2154 4 * 0 0 * * 0 0 TTTCAGATTCTTGCGCAGCCGTCGGTGGTAGTGGNNNCCAANNNNNNTTT @@CFFFDFHDHHHEIJIIJJIFHII:BG?DFDCH################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2057:2160 16 chrX 21573091 0 9S15M4I22M * 0 0 CTANNNNNNGCATACGCTTCAAGAAGCTAGCTTTACAAAAGGCGAAAGTA #########ECD?8G>GGC>IHGHGGGGEEGIGEC@IHHHHHFFFFFCCC AS:i:57 XS:i:57 XN:i:0 XM:i:0 XO:i:1 XG:i:4 NM:i:4 MD:Z:37 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2145:2160 16 chr2R 17515533 42 9S41M * 0 0 GCTNNNNNNCACTCTTTGCCAGCGGACAACTCCAGACGCTGATGCGGGAT #########@=IGIJJGJJJJIIJJIIHFIGJIJIIJHHHHGFFFFFCCC AS:i:82 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:41 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2243:2161 0 chr3L 20319473 18 50M * 0 0 CCAAAATAGAAATCAATATAACAACAAAAATAATAACAGCCANNNNNAAT @@@DD=DDC?FF++?++3?=))1?*:=4***?A??*?######### AS:i:87 XN:i:0 XM:i:3 XO:i:0 XG:i:0 NM:i:3 MD:Z:21T17T5A4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2136:2178 16 chr2RHet 643908 1 50M * 0 0 CCTCTCCTCTCTTTCCGCTATACGCAACTGGAACCATAATGACCCCACAA @DE@=C;CB.B0?@AFB:*??:FGDC?HFBE9FEEIIFFAC<@DDDD<@@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2057:2180 0 chrM 13907 1 50M * 0 0 AAATTTTTTCAAATTATTTCAATTTTCTTTTACAATACTAATAAACTATT @@CFFFFFHHHHHJIJJJJJJHIGIIGJIJJJJIIEGIJJIIGJJJGIJI AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2242:2181 16 chr2L 3056353 44 50M * 0 0 AATGAAATCGTAGATCCGTGAGTAGATCGCCGGTAAACAGCGGCTTATCA B>DC?6(:7GEE@F@EDEHAGGGHDIEGF:@IHGGFIGHFA@@FA?FDEIHHFCBDDDDD?@? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2001:2188 16 chr2L 10056080 44 50M * 0 0 AACAATTGAAAAAGGGACTAAATCGATTGGCAGCAATCATCTCTAAAAAA HGGIIHDIIJJJIJJJIJIJIHEJIJIJJJIJJJIHGHHHHGFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2178:2191 16 chr3L 10733921 44 50M * 0 0 TAATCACTTAGATTTGAATTAGATACATTTATACTTAAATACATTTCAAT JJIGE:HIGGGEJIIJJJJIHCIHCIJHHGIFHGGBJHGHHHDFFFFCC@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2218:2194 16 chrUextra 18534648 1 50M * 0 0 AAACGAAAGAAGTGGACACAAAGTAACAGAAATGGGTCGTTATACTTGAA GIFDBHFB*FB94AFC3?GEEBIGH?IGGGDIIGFIIJIIJJIJJJJGHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2158:2202 0 chr2L 18722418 28 17S33M * 0 0 CAACCAAAAAACAAGCTAGCTTATATTCAATGTTCCAACTCATGCGAGGT CCCFFFFFHHHHHJJJJJJJJJJJIJJJJJJJHIIJJJJIJGIIJJGIJ7 AS:i:66 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:33 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2012:2203 16 chr3R 15529047 44 50M * 0 0 ACTGAATGCCGAGTCAAATTTGCGGCCTTAAAGCACAAATTGAACGAAAT BHHCIGD7D1BFFFFDFD?:8:@;IHFHGH>HBEA?>DHFHFFD>DD@@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2052:2204 16 chr3L 21879710 22 25S25M * 0 0 TTTAAAAGGATATGTAACCAAAGCTAGCTTATAGCAACCCTACTTCCCAC IIHIHGGHEAIHHHFD;JIIJIIGJJIJIIGGGIGDDHFFHCFDDDF@@@ AS:i:50 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2134:2211 0 chr3L 8915120 44 50M * 0 0 AATTTAAGCCCTCTGCTATGTCAACCAAAATAAGATTTACTTTTGTAAAG CCCFFFFFHHHHHJJJJJJJHIIJJJJJJJIJJIIJJJJJJJJJJIJJJJ AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:39T10 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2208:2212 0 chr3L 15084972 41 42M8S * 0 0 AATAGTGACGACCCGCCACCGACATGGACTGCGAGGAGAGCTAGCTTTGA @@@FFFFDHFHHGJJJJJIJJII>GIIGIJJDG0;F;CDHAAEEHFDFB3 AS:i:76 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:16T25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2233:2217 4 * 0 0 * * 0 0 AAAAAGGAATTATCAAAACACAAAAAACCATCCACAGTTCAAACATAAAA ;;;?############################################## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2246:2225 0 chr3L 9084047 44 48M2S * 0 0 GGGAACGGTCGAGCAAGGCAGTACATACTCCTCGTCGATGCGGAATCTAG @@@FDBFFAFFHHIIIIIGHCDFBFGHIIGGEGGBBFFGE=8FHGEEEHC AS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:48 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2054:2225 0 chr2L 904301 44 50M * 0 0 CGGGCAGGAAGTTGATTAAATGACAAAATAAATAGAAAGTGAAGGATAAT CCCFFFFFHHHHFJIIJIJJJJJJJJJJJJJJJJJJJIJ:BGIIJIJJJC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2180:2225 0 chr2L 8600758 1 35M15S * 0 0 TGTTTCGGATTCAATGTTATTATTATTTTTAAGCTAGCTTAGCAGTGACA BCBFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJHIJJJ AS:i:70 XS:i:70 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2086:2236 16 chr3R 16184524 38 1S49M * 0 0 TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGAGGCGAGTAAACAGATC ###DDDDDDDDDDDDDDDFHJJJJJJIHFA:HJIJJJHHHHHFEFFFC@C AS:i:98 XS:i:52 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:49 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2226:2240 0 chrX 10770829 44 50M * 0 0 TGTTAATGTTTTTGTGTTTGACCTGCCACCTCATCAGGCCTTAAATAAGC ?@:BDDDDDBFDHHEHAGHGIGCHAHE9FGCHIECGHIGICHEHIHEGGG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2193:2247 0 chr3L 20059510 44 50M * 0 0 ACTGGTGAAGTAAGAAAATCGATGAAAAAGCTGAGATTTTTTCAAGCCAA @@CFFDDFHHFHHIIJJJJJJIJJJJJJJJJJJIJJIIIJJJHIJJIJII AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2485:2101 4 * 0 0 * * 0 0 TTATNTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<?@######################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2256:2110 4 * 0 0 * * 0 0 GCAGNTGAAANNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<8@?@@<8)@################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2485:2124 4 * 0 0 * * 0 0 TAGANACATCCAGGAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@@@?@@@@?@@@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2325:2126 4 * 0 0 * * 0 0 TCTTNTAAAAGGTTTATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<4;=>8@:::=?@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2357:2145 4 * 0 0 * * 0 0 CCTAAGATAGCTTTGGAGCGGANGNNTTGGTTTNNNNNNNNNNNNNNNAN <<<@@??@@@@@@@@@@@?@@?#1##1:=????################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2279:2146 4 * 0 0 * * 0 0 AAGCGAGTCAAGCTAGCTTTAANANNAAACATTNNNNNNNNNNNNNNNAA <<<@@@@?@@@?@@?@@??@?@#2##4:@????################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2427:2148 4 * 0 0 * * 0 0 TGGCTCGACGGCCTAATGTTTAAANTTAAAACATNNNNNNNNNNNNNNAT CCCFFFFFHHHHHJJJIJHIJIJJ#0?DHIJGIG################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2473:2149 4 * 0 0 * * 0 0 CTTAAAGTTAAATATATGTAGAGANGAGAGAAGANNNNNNNNNNNNNNAA <@?D?:DBFDDBD@BAFBECCFFIEFE>E99@BHA:A<<<@IIFFFBBDDDDDD@@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2429:2171 0 chr3L 16612656 1 50M * 0 0 TCGAATGCCATTTGGCCTTAGGAATGCACCCGCTACTTTTCAAAGGTGCA B@BDFDFDHHDFHGIIICGGGIGHE@EEFC?DHIGGDHHGBGGGDCBFFG AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2359:2177 0 chr3L 12068532 36 15S35M * 0 0 GAGTTCTATTAAGGTAGCTTTCCTGCTGCACTTAGAAATTCTTTACATAT BB@DFFFFHHHHHJFHIIJJJJJJJJJJJJJJJIJJJJJJJJJJIIJJJJ AS:i:70 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2268:2180 0 chrX 7808176 44 50M * 0 0 CATCAATCCCAAATCATTAAATTGGTAATCAATAAGCAGAAAGGCAACAG CCCFFFFFHHHHHJJJJJJJJJJJJHHHIIJJJIJJIJJJJJGIJJJJJE AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2451:2183 16 chr2R 14630722 44 1S49M * 0 0 TCGATGAAGAGATAATAAAAAACCTGAAAAATAAAGGAACACACTTTTTA IJIJJIIGIJGIGJJGJJIIIHIJIJJJIGJIIGJIIHHFDFAFFFFCBB AS:i:98 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:49 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2290:2185 0 chr3RHet 169055 1 9S41M * 0 0 AACAAAGCTAGCTTAAAAATAATAATAACATTGAATCCGAAACAAAACAA CCCFFFFFHHGHHJJJJJJJJIJJJJJJJJJJIJJJJJJJJJIJIIJJJI AS:i:82 XS:i:82 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:41 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2398:2190 16 chr2R 21110514 42 26M1D24M * 0 0 GTTTTTTCGCGACTTCGCCTGCATTGTTTTTTTTTCAGTTTCTTCAATTC DDDDDD@EBED@JJJIFJIGIJJJJJJJJJJJJJJJJHHHHHFFFFFCBC AS:i:84 XN:i:0 XM:i:1 XO:i:1 XG:i:1 NM:i:2 MD:Z:14C11^T24 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2309:2191 16 chr2R 9572210 44 50M * 0 0 ACACACACACACGCGCCAGAAAGCAGAGCAGTGGGGAAAGTTGTAATCTG =@=B8B9B.@6IHIIIIIIJJJJIIHGIGIJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2354:2192 16 chrUextra 7467378 1 50M * 0 0 TAGCAACTAGCCCGTGTCAGTGAGCATACGATTGCTGGATTCGACAAAAG #########A<=4:?*:*AAA@<9><2++HIHEJIGGEHHGHHFFFFF@@@ AS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:48 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2373:2248 0 chr2L 17034115 36 15S35M * 0 0 TGTTGTTGTTAAGCTAGCTTTTGCATTCCCCCATAAATTCCAACATTTTT @C@DFFFFHHHHHJJJJJJJJJGJIJJJJJJJJJJJJJJJJJJJGIJJJJ AS:i:70 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2477:2250 16 chrX 14054125 1 50M * 0 0 TGTAAAAACTAATTGTATTGAATTTAAATGTTCTGTAAGGGATGTTGAAA JJJIIJHGJIIJJJJJIJJHIIGJJJJJJJJJJJJJIHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2548:2105 4 * 0 0 * * 0 0 TACGNAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@?########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2511:2109 4 * 0 0 * * 0 0 AGGTNAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@?########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2708:2117 4 * 0 0 * * 0 0 CCTTNTGAGGTTTNCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#29;@??>@#3@################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2534:2117 4 * 0 0 * * 0 0 CAACNTCATGCGANTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<9==?###################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2636:2122 4 * 0 0 * * 0 0 AAGANAGGAATTTCTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@?>@??################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2591:2127 4 * 0 0 * * 0 0 ATTCNACATCACGGATGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@??<7@@@@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2679:2138 4 * 0 0 * * 0 0 AGGAAATAAAATAATTGTTCTNNNNNNNNNNANNNNNNNNNNNNNNNNNN <<??@@?@?@?????############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2741:2149 4 * 0 0 * * 0 0 TGACAATTTACAAACAGATCCTAGNACCAAACTGNNNNNNNNNNNNNNAA CCCFFFFFHHHHHJJIJJJJJJJJ#2AGIJHFGH################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2617:2151 4 * 0 0 * * 0 0 AATCTAATGCGAAAATCCCATGAGNCGAACCCATNNNNNANNNNNNNNTT CCCFFFFFHHHHHJJJJJJJJJJJ#1CGHJJJJI################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2577:2151 4 * 0 0 * * 0 0 CAGCCAATTATCAGGACTGTCGCCNTATATGTATNNNNNGNNNNNNNNGC B@@FFFFFHHHHHJJJJJIHIIII#2AEHIJFHH################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2653:2160 4 * 0 0 * * 0 0 TGAAACCCAACTTTAAGCTAGCTTAATGAAATTAAGAAAAANNNNNNGAA CCCFFFFFHHHHHJJJIJJJJJJJJJJIIJJJIJJIJJJJJ######### YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2687:2161 0 chr2R 749386 1 50M * 0 0 CTGGAGCTGCTCTTGCGTGTTCTCAGAGCCTTTTTGCGTGGTNNNNNTCC @CCFFFFFHHHGHJIJJHIGIIIJJJIIIJIJJJIJIJDHG######### AS:i:85 XS:i:85 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:42G0T0T0G0T3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2551:2162 0 chr3L 3286472 36 5S45M * 0 0 CGAAGTTTAATTGATTAAAATGTGACGATTTAGTCACAAGTTNNNNNCAT CCCFFDFFHHHHHIJJIJJJIJHIJJJJJJJJIHIIIJGIHI######## AS:i:75 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:37T0A0G0A0G3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2735:2167 0 chr3R 7601325 44 50M * 0 0 TGTTATGGCAGGTAAAAAATATAAAACGCTAAACTGGAAATATNATGCGT ==>AAA;ACBA<2+FHHGHEIIIIGGGIIIICGGGII AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2529:2207 16 chrX 14888992 41 38M12S * 0 0 AATTAGGAAAATACCCTCAAATCGGATCAGAAGAGGCTAGCTTAAAAATA IIJJJIJJIHGB:BIHBHGGF?JHHHIIJJJJIJJJJHHHHHFFFFFCCC AS:i:76 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:38 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2731:2212 0 chr3R 24524238 44 50M * 0 0 GACTGGGAAAACTAATTCATTTGCTAGGACTACCTTTATGGAAGTCAAAA CCCFFFFFHHHHHJIJJIIGHIIIIJJJJJGEGJJIIIIGGGIIGHIIIJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2579:2213 0 chr3L 12194608 44 50M * 0 0 AGATTTAAGTTAGCAGGCACACAACACCGAGGCATAGGAACATCTACAAT B@@DFF;DHHHHHJJJIIJIJJJJJJEHD:FBAGBBD@HBDEHGGGGGII AS:i:94 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:6G43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2674:2215 16 chrX 22262520 44 50M * 0 0 ACGTGGTTGAATAATTACCGTCTATCTGTCTATCTATAAAAAAGATCTTT ?JIHCCIIEIIGHEGD?IJIHJIGDIIHHCGJIJJJIHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2715:2222 16 chr2R 17295288 44 50M * 0 0 GCTACAAATTGTCGTAAAGTTAAGCGAATTTATTGGCATACATAATGCAT F?F@EGGB@AGC:BDIFGDH@GEDBEFDIIFEFEDE@?##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2828:2119 4 * 0 0 * * 0 0 AGCANTTGATATAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@@?@@@?@?@################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2779:2122 4 * 0 0 * * 0 0 TGTCNTTGAATTGGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2806:2122 4 * 0 0 * * 0 0 CTCANTAGTGAAGCTAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2<@??@????>?################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2934:2125 4 * 0 0 * * 0 0 ACAANTGCCCAAAATGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@@@@@@@@@@@??############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2870:2125 4 * 0 0 * * 0 0 TCATNGATGTTACCTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@@?@@@@@@@@@@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2995:2128 4 * 0 0 * * 0 0 ATTCGTGAAAACTCTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@@@@@@@@@@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2766:2138 4 * 0 0 * * 0 0 TGTTCTAACACCAGATGGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ;<9?@<>=EC######## AS:i:75 XN:i:0 XM:i:3 XO:i:0 XG:i:0 NM:i:3 MD:Z:34G0T0T5 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2886:2168 0 chr2L 11750828 44 50M * 0 0 ATTTAATGCAATTTATATTATAATACAACTGCAGATTTCAATATTTAAAT ?@?=DDDD>?FDFB:A>GIIICAFHFFDDBD?AD<8@ AS:i:85 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:27C18 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2894:2188 0 chr3R 3666915 44 50M * 0 0 TAGGAATTAGAATGGATTTATTTCAAACACTGATAATTGTTTTTGCACAT C@CFFFFFHHHGHIJIIJJJJJJIJJJJIIIJJJJIJJJHIJJJGGIJII AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2861:2189 16 chr2R 2934635 44 50M * 0 0 ATGTGTGTTTTATAAAAACTTTTAGGGCTAGGCGGTCTGAGATTATAAAC IIJJJJJIJJJJJJIIHBJJJJJJJJJJJIJJJJJJJHHHHHFFFFFC@C AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2771:2191 16 chr2L 21507637 1 50M * 0 0 GTACATGTTCGCAATTAAAATTTTAGATTTATGATTTATAGATCTGAAAT IIIIGJJJGJJJIHIIJIJIGIJJJIHIHHGIJIJJJHDFHHFFFFF@@@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2818:2191 16 chr2L 3685399 44 50M * 0 0 TTGGTGCCTTTAGTAAGTCTTTTCGCTGAGTGCAAGTCGTGCAGAGTGGC JJJJJJJJJJJJJJJJJJJJJJJJIJJIJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2752:2200 0 chr2RHet 3147326 1 50M * 0 0 AATAGTTCAAGCCACTAAGGAGGAGTTAGATTGCGAGGCCCACTTTGTTA @@@FF;BDHHGHGIIEGIIIIIB?FFHHGIIIECHGIGGGGHEFHIHGIE AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2974:2205 16 chr3L 13958080 9 27M23S * 0 0 TAAAAACGTTTAATTAACATATAATCTAGCTTCAAGCAACTAAACGGCCT IJIHFDJJJJIJJIJJJIJJJIJJJJJJJJJJJJJJJHHHHHDDFFFCCB AS:i:54 XS:i:46 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:27 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2808:2210 16 chr2L 11256624 44 1S49M * 0 0 TAGCTTTCTAGGTTGCTGCTTCTCAGTCAGTCACAATGGCGACAATAAAT HGJIJIGJHDIJGHIGGCIIIIJJIJJJJJIHDJJJJGHHFFFFFFFCCC AS:i:98 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:49 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2924:2212 0 chr2L 22306967 41 40M10S * 0 0 AACATATTTGAAAGCAGAAAAAAAACCCTAAAGTAAAGCTAGCTTTTCTT @@@D?DBAFDBH?B>GGIIIIIIIIIIIGHHEH*0BBBCH>9CHIIIGII AS:i:80 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:40 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2910:2213 16 chr2L 13174428 28 13S37M * 0 0 GCTTTCCAGGCCAAGCTACCTTACCCATGCCATCTTTCTGTATGGGGATC HHEHDGFDGGGGEIGHGFIGF??@4@)2@@################### YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2758:2219 0 chrX 20239698 44 50M * 0 0 ATTGCAAGAGAAAGTAATGGGAATGTAAAAATTGGCCTGCAGAGCGTTTT CCCFFFFFHHHHHJEGIIIJJAHJJHGIJJJJIJJJJCGHIIIJJH@GGJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2889:2220 0 chr2L 4313327 44 50M * 0 0 ACGAACGGAAGTTGGGGACCCACAAGTATTCAAATGCGAAAACGAAAATG @@@DDFDAD=FFFHGHG?GHIIIIIIHIIGGEHIIGGGIGIIIIIIIGHG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2825:2224 16 chrX 15130444 44 50M * 0 0 TATACTACTCCGCCACCCCACCATCGCCCCCCGGGATAATAAGCAGCTTA C@3+3>+:066A70&B583(B670DBBIIFIIIIIGGDHAFBDEDDAC@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2808:2230 16 chr2R 20773293 44 50M * 0 0 TCCAATCCCGTGAACTTTTGCGACCAGATTCGCGCTACACCTCCTGGTTA FFFFHFHJIJIHF@GEIIEHG@?IJJJFJIHBIGHGEFAHHGFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2994:2231 16 chr3R 7490762 44 50M * 0 0 AGATCATTAAGATACCAAGCGATCGCCAGCCATTCTCCACATCCATCGTG DGCCEGIGIGGFB?IGF>HGIIIJIIJJJJJJJIIGIHFHHHFFFFFCCB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2844:2234 16 chrUextra 16214464 1 50M * 0 0 AAACATCGAAGGCATAGGCCAAGGTGTGATAAAGTCTCAAGGAACAACCT JIGIIFJJJJJJJIIJJJJJIGJJJJJJJJJJJIHIHHHHHHFDFFDCCB AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2949:2236 16 chr2R 9824163 44 50M * 0 0 AGACACTGTCTTCTCGCCGAAGTGCCAGTGAAGAAATGCCTCTTAAGATA GGDHGGIJJJHGJIIGJJIIHBHEEHGHGGIEIJIIGABDGHDDDDD@@< AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2903:2241 16 chr2RHet 2203675 44 50M * 0 0 TCAATAGGATCATTCCTTTAATGACAATCGGACTAAATAAGCCGAGTCCA ?*?0*AD9*F?9B?*19CC?19C?)2+2;EECCA,FEFAF;F;DDDA?@?@(<@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3019:2133 4 * 0 0 * * 0 0 CAATGGACCGCTCATTGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<3+?<;AA+<=>=>A<4??A47:09*==8A########### AS:i:91 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:17A26T5 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3161:2171 16 chr3R 16192709 42 7S43M * 0 0 TGAAGCTAGCTTTGTCTTCCATTTGCGACTTACATTTCCCGCATATTGTG FEGGGCHFIIGIIHCHCBIIGGHFG=E9GFHBIGIHAFHDAF;DDDD@@@ AS:i:86 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3045:2172 0 chr2L 15580791 44 50M * 0 0 TAATTCAGCACCGCTGGAGGAAACGGATCTGCACATACCGCGCCTCATCG @C@FFDDD?HHHGGIIJGIGGIGEHGIJJEIJJJEBGHIIIGBFFEICEH AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3081:2173 16 chrX 9687923 44 50M * 0 0 AAAGTGTGTATAGGTATGATTTCGTTGTATTAACAATCAAAGTGTTGGTT ?4BD999DDBA:+8?? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3120:2177 0 chrX 2597738 42 50M * 0 0 AGACGACTCCACCGGACCGGGCGACACGTAAACAACAATCAGAGCCAGAA CCCFFFFFHGHHHJJJJJJGHGJIJJGIDHHHHHFFFFCCCCE>>ACBBC AS:i:86 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:12T33C3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3021:2183 0 chr2R 794760 44 50M * 0 0 AGCTTGTCGCAATCTTCTGATATTGGTGTATGTAGCTTTGAAATTTCTGA CCCFFFDFHHHHHIIJJJIHIJIIJIGIFGIGIIIJJJJIIJJJJJIJID AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3099:2183 16 chr2R 1207732 44 50M * 0 0 CTTTATTGTGCACATTTGTAGGATCTGTATTGTGTGCGCAGCGATCTGGG FDFFFD?FBDDDDB@?; AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3151:2243 16 chrUextra 2161170 1 50M * 0 0 TTGGGTCAGCACTTTATGGAGCCGATTTGATAACCTTCTGTAGATCTGCT HEIIGIIIHFBJJJJIHJJJJJJJJJJJJJJIHJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3055:2249 0 chr3R 5668606 1 50M * 0 0 AATGGACAAGCGAATGCAATGATGCATTCGAATATCTCAAAAGGGAATTA CCCFFFFFHGGHDIGGIJIDHGBHIFIIJJJIGIJGIGIIIJGIICHEII AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3409:2102 4 * 0 0 * * 0 0 CAGANGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@############################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3373:2103 4 * 0 0 * * 0 0 AATCNCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<?############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3477:2137 4 * 0 0 * * 0 0 TGCATTCTAAATACATTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ;<<8;@???@?@??@@?@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3321:2145 4 * 0 0 * * 0 0 TTTTGAGGGGATCATTCCGCTGNTNNGCNAGANNNNNNNNNNNNNNNNNN <<<@@@@@@??@@@?@@@???@############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3269:2153 4 * 0 0 * * 0 0 CAGCTAAGAATGCAAATTCAAACTNAGTTAAAACNNNNTGNNNNNNNTTT CCCFFFFFHHHHHJJJIJJJJIGI#3AFHIGIJJ################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3375:2153 4 * 0 0 * * 0 0 TGATGGCTCCATTTTCGCCTACGANCTCCTTGGTNNNNGTNNNNNNNTGG CCCFFFFFHHHHHJIHIJJJJJIJ#4@GHIJIGH################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3290:2155 4 * 0 0 * * 0 0 TTGCGTTTAAGACCCTGAGAATGGGTTTCTGCTCNNNGTGTNNNNNNAAG CCCFFFFFHHHGHJJJJIJJJJJJJGHIEIIJII###00??######### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3465:2159 4 * 0 0 * * 0 0 CATTAAGTTACTTTCGTGTAGGATTGGAATAATTTTTAATTNNNNNNATA ;;<@############################################## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3436:2159 4 * 0 0 * * 0 0 GCCCTCTCGAGAGGCCTCAAGCTACCTTGCTGACACGGTGANNNNNNTGA CCCFFFFFHHHHHJIJJJJJJJJJJJJJIJGJJJIJJJ?FH######### YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3488:2161 0 chr3L 17974270 42 50M * 0 0 CAGTGGGCATACAAATACAAATGCACCGAAAGAATTTCGTGNNNNNNAGC CCCFFFFFGHHHHJJJJJIJJJJJJJIJJJJIGGHIJJJGH######### AS:i:82 XN:i:0 XM:i:6 XO:i:0 XG:i:0 NM:i:6 MD:Z:41T0G0T0G0G0A3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3398:2168 16 chrU 7021385 0 17S33M * 0 0 TACGATTGATGTAAGCTAGCTTTGTGATTGACCTCTTTTGAATGCCAGAT JIJJJJJJJJJJJJJJJJJJJJJIJJJJIGCJJIJJJHHHHHFFFFFCCC AS:i:66 XS:i:66 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:33 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3295:2172 0 chr2L 385385 44 50M * 0 0 CAACTTTTTGCCATGTCGCTGGCAGTTTTCAATTCATTAGGCTGCGGATT @1=DBDDDH<>A9@FA7?E?FGE?EHI@DD?>A AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:12G37 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3329:2172 0 chr2L 17796009 44 50M * 0 0 GAAAATACACATTTTTTCAAACAATATAGTCGAAGCGAGCTCAATGAACA @@@FFDFDHFHHHIJJJGHIJHGIGHHGGGIIGIGEB1?@@FFHCDBFHG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3362:2177 0 chr2R 11027815 2 24S26M * 0 0 ACAGAACCCATACGAGAGAAAGCTAGCTTCGGTTGACCGAATCTAGCCTG CCCFDFFFHHHHHJJJJJJJJIJIJJJIEHIIBFHFHIGGIIGGECHHAA AS:i:52 XS:i:48 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:26 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3386:2179 4 * 0 0 * * 0 0 AGCGGCGGAAGTCGAGAGGCGGGAGAGAAAATGGGAAAACGAAAAGCAGA ???BDDAA:::09)0?BD################################ YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3286:2188 16 chr2R 17462120 36 15S35M * 0 0 TAAAATATGTAAGCTAGCTTACGTTTTTGGGAATTTGTTATATTCTAAAG IJJJJJIHJJJJJJJJJJJJHJJJJJJJIJJJJJJJJHHHHHFFFFFCCC AS:i:70 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3437:2188 16 chrX 10724747 1 50M * 0 0 AGTACCGTTTTTTACTCCTAATTACCAATTCTAACCATCCATATCTCTTT GGF?JIGJJIHGGCIGJJIHGIH@IIJJJIJIHFJIHFHHHGFFFFFC@C AS:i:93 XS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:45A4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3337:2193 16 chr2R 6150473 22 26S24M * 0 0 GACGAAATGCCGATGGTGCGAAAGCTAGCTTCGTTCTTAAGACTGGAAGA HJJJJJJIIJJIJJJIJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:48 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:24 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3369:2196 16 chr2RHet 2618992 1 50M * 0 0 AGCTTACAAATAAAGACTGTTCCAAGCATAGTTCTACGGTTAGCTAGGGA BECG>DHGGCHCGFEGB?:?9CGHGFAHFAHE=CBAFFDDHAADEDD?;@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3468:2197 0 chrUextra 699884 1 50M * 0 0 ATTAAAGGCCTGAAGTCCGTCACGAACTTTTAAAGGTGCAGATACATTCG CCCFFFFFHHHHHJJFHJJHIJJJGJJJJJJIJJJJBGGHIJJIJJJJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3396:2197 16 chr2R 17318481 44 50M * 0 0 TTATCGCTGCTCAGAAGTTTTGGATTTCGCTAAAACGATCATAAATATTT JIIHIJJJIJIJJJJJJJJJJIJJJJJJIJJJJIGJJHGHHHFFFFFB<@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3484:2208 0 chr3R 21776344 44 50M * 0 0 CTGGTAAGAAAATGCTCTTAACTTGAAAAATGTGCCAGGATTAGGATAAT ===B4ABDFHGD?@FGIGHGHEHGEIGGIGGIEG@ECFFDDHGGIFIGIH AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3419:2215 16 chrUextra 16578590 1 50M * 0 0 CTTGCCCGTTTGGCACTCGACATATGATTTGAACAATTCGAATTTATCAA IIGDJJIJJJIGHH?JJJJGJJJJJJJJJJIIHJJIJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3267:2218 0 chrU 4763827 1 50M * 0 0 ATTTGCGAGTATTCGGATCTCGCGCGTTTGCACTGGATAAGACAAGAAAA CCCFFFFFHFHHHJJJJJJJJJJJIJHJJIJIJIJJIHIIIIJJJIIHHH AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3466:2221 16 chr3LHet 265978 1 50M * 0 0 AAACTATGAATTGCAATTTCTGGAAAAAATAGCTTAAAAAAAAATAGCTA JIHJJJJJJIJIIJJJJJIJJJJJJJJJJJIJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3398:2221 0 chr2L 4856912 44 50M * 0 0 GCAAACCAATTTTTGGGCAGTCAAATGTGAGAGGATTGTGTATATGTATC CCCFFFFFHHHHHJJJJIJJIJJJJJJDHCGDGHCFHHBFBFIGGIHIIJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3311:2222 0 chrX 13376617 44 50M * 0 0 TTGTCTGCAATTTGCCAACACTTGATGGGATTATCATTTATTTTGGTGCT @BCFFFFFHHHHHJJJJJJJJJJJHJIJIFGIJJJJJJJJJJJJGIFGII AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3492:2224 16 chr2RHet 1558235 40 50M * 0 0 ATTGAAGCAACAGCGACACCTGCAGAAATAATTGAGGCTCTGAAGGGTAA HGB>G?:9IHDDCGFCE?IHF9FDDCGFBD@CAFIIHIHHBCCIHGHEDFDF?FDFDA@@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3321:2242 0 chr3L 20240267 44 50M * 0 0 AATATTGCAAAATTCATTAAATAGATAATTATAATATTACATCTGCAATT CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3668:2103 4 * 0 0 * * 0 0 AAGCNCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@=@?@@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3569:2130 4 * 0 0 * * 0 0 GGCCTAGCTCCATTGAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<>:>????>#3##22;@@################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3537:2148 4 * 0 0 * * 0 0 CGCGAAAGTGTTTTGTTTTAGANANNATAGCTTNNNNNNNNNNNNNNNAG ;<@@;>=@?@?@A4*=ABA################# YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3504:2167 0 chr2R 15577985 28 37M13S * 0 0 TCCCAGCGGTAGTGTACTTTTTACAATTTTGGAAGCTAGCTTTNNTGTGT @<@DBDFFHHGFFHEFEDHGGIHIJIIIIIJJJJECHGHEIIJ##077B< AS:i:66 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:23T13 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3605:2167 0 chr3RHet 791669 1 50M * 0 0 GCTCTCTGCAGAGTGGTGAGTCGATCAGTCGATAAGTTTCTCGNNAATAT CC@FFFFFHHHHHGHIEGHJIJJIJJJJGHHDHIIJDFIIJIJ##07BDE AS:i:94 XS:i:94 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:43A0T5 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3725:2170 16 chr2L 3376619 44 50M * 0 0 TGATGAACTAATAATTTAATAGCTATAAATTTAAATATATCACGGATTTT IHHFEHHHDB?GDGAIHCC?@EBE:HFHIIHIIIGIJIDIJI AS:i:100 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3655:2211 16 chr4 937321 44 50M * 0 0 AATAAATATATCGAAACATTTTTCATAAGTTTGTGTGTCAGTTTTGCCGG JJIJJJJJJJJJJJIHJIJJIJJJJJJJJIJIJJJIJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3688:2213 0 chr3L 15742279 44 50M * 0 0 TTAACAATCCTTAAATAGTAAATTAACAATATTTTTACCCTATATCAAAG @CCFFFFFHDFHDHHIGGCIGGIIIIEHGIEIIGGGEHGIEGHFGFHIII AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:17A32 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3509:2224 16 chr2L 15144576 44 50M * 0 0 ATCCGGCAGTTTGCGTATTGTTGCTGTCGTAATCATAGTCACAGTCGTCC #################AA=BBAAAAAEBC9FA+:3<+:;EB9DBD>A?B=DD?################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3899:2120 4 * 0 0 * * 0 0 AGCANTCAACTGTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@@@@@@@@@@################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3827:2126 4 * 0 0 * * 0 0 TAGCNATCCCATGTGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@@@@@@@??@@@@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3941:2129 4 * 0 0 * * 0 0 CAATTTAATATCTAAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@?=?@@=?@@@?############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3920:2138 4 * 0 0 * * 0 0 AAGCCAAAAGTCACACCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@??@??=@@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3869:2142 4 * 0 0 * * 0 0 AAAAAAATAATAATTATTTATNNNNNNNNNTTNNNNNNNNNNNNNNNNNN <<<@@??@@???@?@@@@@@@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3795:2144 4 * 0 0 * * 0 0 TGAAAAAAGATATGATAGTGGCNNNNGNNCACNNNNNNNNNNNNNNNNNN <<;=@@@?>@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3902:2147 4 * 0 0 * * 0 0 TGTCAATGAAGGTGTAGAAAAANGNNCTTGGCTNNNNNNNNNNNNNNNTN <<<@@@@@@@@@>?@?@@?@@@#3##2<@@???################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3812:2148 4 * 0 0 * * 0 0 CGGCAAAATGAAGAATGTATAGNCNNAGCTCCGNNNNNNNNNNNNNNNAA ;9<:@@@########################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3829:2148 4 * 0 0 * * 0 0 AATTAAAACAAATTTAACATTTNCNNAAACCCANNNNNNNNNNNNNNNTA ;<===>#3##2<=89??################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3979:2151 4 * 0 0 * * 0 0 CAAAGCCAAAGGATTTCAGCCCAGNGAGCTTTCCNNNNNNNNNNNNNNTC CCCFFFFFHHHHHJJJJJJJJJJJ#2AEHIJJJJ################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3955:2152 4 * 0 0 * * 0 0 TTTTTCATTTCATTTTTGAGTGACNCTTGGATTTNNNNNANNNNNNNNTT ;;(;=)):6;<@==?################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3934:2154 4 * 0 0 * * 0 0 CTAATTCTGCCAGAGAAGGAATAANAATAATCTANNNNTGNNNNNNNTTC @CCDFFFFGHHHHHHEGHGGIIII#2AAGHIIGG################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3788:2163 0 chr2L 18716978 42 50M * 0 0 ATTAATACATAACTGGACCTTTATAAAGATATACAATGGTATNNNNNTAT @@@DDDDDFHHHHII;CFAEFH>HGHIICBFBHGGCCGA*CF######## AS:i:85 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:42A0T0A0T0C3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3876:2163 4 * 0 0 * * 0 0 TACATTTTAAATAAGCTTGCTTGCTATTTGAATAAATCCATANNNNNACA >=;A7AA;2++2@C++2+++3@<+@B=3+2+?CC?############### YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3838:2164 16 chr2RHet 103700 42 50M * 0 0 GGANNNNNAGGATGTTCTTAATTATGAATCTCATATGCCGGCACTGTTTG ########IJIJIIJJIJJJJJJJJJJJIJJJJJIJJGHHGHDFFFFCCB AS:i:85 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:3C0A0A0A0A42 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3802:2165 0 chr2L 14364943 22 17S33M * 0 0 ACCTAAATTTAAAAGCTAGCTTTGGCATTCAGGTGGCGCGATNNNNCAAT @@?DFDFDDHHHDEIIHBEGHIIGGGIGGFHICDEGEHHIII######## AS:i:54 XN:i:0 XM:i:4 XO:i:0 XG:i:0 NM:i:4 MD:Z:25T0G0G0C4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3769:2166 0 chr3L 12493605 44 50M * 0 0 GATGCACCAGTTGCTCCATACTTCTGTAGGTGTCCACATAGTNNNCATCG CCCFFFFFHHHHHJJJJJJJJJJJJFJJJJBHHHIIIJIJJJ###20?FG AS:i:91 XN:i:0 XM:i:3 XO:i:0 XG:i:0 NM:i:3 MD:Z:42C0C0A5 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3960:2168 0 chr3RHet 223981 14 50M * 0 0 TGATTACTGTTTTGTAATATCTCCGATTATTGCTTGACTATGANTTCCCC @@FHII;BGG?*?99IGGIJJJHGBIIHIJIHIJHHHHHFEFFFB@@ AS:i:94 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:47 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3968:2211 16 chr3R 18762461 44 50M * 0 0 AAATGCAATAAATTCAAACAGGGCTACACTCGCATGTCTGTTCGAGATCA GGB?9?D4DFDB>>EDFBDFCGEF?GFDGEEGDBIHFFHGHF?AFDFC@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3939:2228 0 chr3R 616768 44 50M * 0 0 CGACGTTTTGCAGCAGAGGCTCTAATGGAAGGCCAGCGAATACGTGCATA @CCFFDFFHGHHHIJJIJJIIJJJJJJJIIJIGGCH;FGHIIGI@FGCGG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3986:2234 0 chrX 8756809 44 50M * 0 0 CCATTAACTTTGGCTGACTGTCCCATAAATTGGCCATATTTATCGCAATC CCCFFFFFHHHHHJJJJJJJIJJJJJJJJJJJIIJJIIJJJIJIJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3907:2236 16 chr3R 831214 1 50M * 0 0 CCATCTGGTGTTAGAACATGTCCTAAAAATGTGGTTTCTTGCTTGAGAAA JJJJJIJJJJJJJJJIJJJIFJJIJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3794:2239 16 chr2R 19069088 9 28M22S * 0 0 TGCTGTAAATGGAAATATTATTTAAGCTAGCTTCTCAAAAGCAGAACATT GJJJJIJJJIJJJJJJJJJIIJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:56 XS:i:44 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3957:2240 0 chr2L 15528929 40 50M * 0 0 CTATTTTGGTAAAAATTTTAATTAAAATCCCAGACAGTTACACTCGCCGC CCCFFFFFHFHHHJJJJJJJJJJJJJJIJJJJIIIIJHHIJJJJJJJJJJ AS:i:100 XS:i:42 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3845:2242 16 chr2L 6247593 44 50M * 0 0 AAATAAATGCAAACATCTGCACCAGATCACAGGCAAAGTCACGGAAGAAA JJJIJJJJJIJJIJJJJJIHEJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3926:2244 16 chr2L 111173 44 50M * 0 0 GTGTGCGTTCGTTCGTTTCGTTTCATTTGTTAAGTGTTTCCCTTAATTCG @GGF@GFFFFFFD?@@? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3774:2248 0 chr2R 20886496 44 48M2S * 0 0 ATGGTTCAAATAAAAGGCTTGTAGATTTGTTTAATGTCTTAAGAAGCTAG CCCFDFFFHHHHHJJJJJJJJJIIIJJJJIJJIJJJIIJJJJJJJJJJJJ AS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:48 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3889:2249 16 chrUextra 229032 0 19S31M * 0 0 AATTCTTATGCGTAAAGCTAGCTTACAACTAAAGACTGTGCCAAGCATCG IJJJIHIIIJIJIJJIJJJJJJJIHIJJIJJJJHHJJHHGHHFFFFFBCC AS:i:62 XS:i:62 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4068:2102 4 * 0 0 * * 0 0 CAGCNCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@########################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4220:2103 4 * 0 0 * * 0 0 GCAGNATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4138:2104 4 * 0 0 * * 0 0 ATCGNAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@############################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4121:2105 4 * 0 0 * * 0 0 GTGGNTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@@??>@@???@@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4228:2140 4 * 0 0 * * 0 0 AAGTTTATAATTTACTTTATANNNNNNNNNNGNNNNNNNNNNNNNNNNNN <<<@?@?@@?@@@@@?@@@??############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4148:2141 4 * 0 0 * * 0 0 CAGTATCTACCAGATATACTTNNNNNNNNNTTNNNNNNNNNNNNNNNNNN <<98=<;<:;@9966;6;;6@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4062:2145 4 * 0 0 * * 0 0 CTGGAAAACTAAGCTAGCTTTCNNNNGCNAAANNNNNNNNNNNNNNNNNN <<<@@@@?@@@@@>??@@@?@@############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4035:2145 4 * 0 0 * * 0 0 GATTGCCAAGGCCCTGGCCACCNNNNGCNAGCNNNNNNNNNNNNNNNNNN <<<@@@@?@@?@@@@@@???@@############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4103:2146 4 * 0 0 * * 0 0 TATAGCACTTACATCGAATCCANTNNCGNTATTNNNNNNNNNNNNNNNNN <<<@@@??@@@@@@@@@@@@@@############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4240:2156 4 * 0 0 * * 0 0 CAATAAATTTATGACGTTAGACAACTCCATTCGGNNNATCANNNNNNGAA CCCFFDFFGHHHHJJJJJGIIJJIIGGIJJJIIJ###11??######### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4195:2157 4 * 0 0 * * 0 0 AGCGTCATGATCTGATGAAGTAAAAAAAAAAAAAGNNCACANNNNNNCTA BCCFDFFFHHHHHJIJJJJJJHGJJJJJJJJJJGA############### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4159:2165 0 chr3R 14830506 44 50M * 0 0 AATGTGTATTTGTTTATTTTGCAGTTTTTGGGTGCAGAACACNNNNTCCG BCCFDEDDHHHHHJJJJJJJIJJJHIGJJJIICFHIIJIJJH####00BF AS:i:88 XN:i:0 XM:i:4 XO:i:0 XG:i:0 NM:i:4 MD:Z:42A0T0T0T4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4006:2167 0 chr2L 22638386 17 50M * 0 0 AGTTAAAAGAGGAAAGTTCCTCTCAACGTAAAAAATACTCTTCNNCACCC CCBFFFFFHHHHGJIJHHJJIJJJJJJJGHHIJJJJJJJJJJJ##07DHI AS:i:94 XS:i:80 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:43T0G5 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4108:2168 16 chr3R 25462240 44 50M * 0 0 GTCGGGNAGTAGAACCAGCTAGGACCTGTTTGATAAGTTTACTTTAATCT HGDD:0#DGIDD?)GJIEHHHAFAIIIIJJHGGIHFEDBHFHFDDDD@@@ AS:i:97 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:6T43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4060:2174 0 chr2R 16285090 16 20S30M * 0 0 AATCGGGTCGTGTTCGAGCTAGCTTAAGACTAAGCTACTAACTAAACCTC BCCFFFFDHHHHHIEGGIGHHIJJJIJCGGIIIHGHGIIIIGGGJJGIGH AS:i:60 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4234:2174 0 chr3R 25486174 44 50M * 0 0 TAACTCATACAAAATATTTCCCTTCAATGTGTAAAATAGAAAATTCTACA CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJIHJJJJIGIJJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4115:2182 16 chr3R 17972214 44 6S44M * 0 0 AAAGCTAGCTCATCTAATCTAAGTCCGGCCTTTTAGTCCAGCTGGTTGAG IHEHGIIIGIGHCIIIGGHEHGD?GIGEGEIGEIGIGFHFFHFFFFFCC@ AS:i:88 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4149:2183 4 * 0 0 * * 0 0 AAAAAAAAAAATCTACATTTCTAGAAATTAAATACAAATTTAATTCAGCT CCCFFFFFGHFHFIIHGHJIIIJJJJGIGGIGIIFIIIIJIJJJJIJJJG YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4221:2188 16 chr2L 15420504 44 50M * 0 0 TATGGTTCTGTGTGCGGTCGACGCCACAACGCCAACGCACATGAATTTGA ########################?11A)6A?6<@2=CA7==<>== AS:i:96 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:21A28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4182:2198 0 chr2R 13782331 44 50M * 0 0 GCTTATTACAAATGAGAGCTGCTTGTAATTAAAAATTGTCAGGCAATATT @@@FFFFFHFHGHGBHGIIIIIJEEFHIIIEIIGJJIGHHGIIIEHIGII AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4106:2201 16 chr3R 4276640 44 50M * 0 0 ACAGTGGCGAACATTTAGATAATTAATAACTTAAATCTGAGACCCTAGTC HIIHEJJJIIEHEJIIIHIHIHIJJJIIHJJHHIHEHFHHBCFFDFFC@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4205:2204 16 chr3L 19190133 44 50M * 0 0 TCCCATCCGCAGTTTGGCAGTGCAATGTTGTTTGCTTAGCTGATGCTGAT HGHA@0EF>CEGIGGGF?EHHCIEHGHFDGGCIIFG@B?6FDA@?: AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4188:2222 16 chr2R 19512501 44 50M * 0 0 CGGTCACACTGCGCTATTGGAAAAGTACAGTTGGCCCAAGACTACTAAGT HGD4B9B=IH>F????################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4361:2125 4 * 0 0 * * 0 0 CGAANCATCTCCCAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@=????@@???@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4317:2126 4 * 0 0 * * 0 0 GTTGNAAGGGGAATCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<==?@??=<>>?############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4463:2130 4 * 0 0 * * 0 0 GGCCTAGAAAACATGATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@@@@?@@@@@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4414:2133 4 * 0 0 * * 0 0 TTGCTTTAAGCTAGCTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@?@@@@@@@@@?@@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4368:2136 4 * 0 0 * * 0 0 CGCAATACTTTTCTGCTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN (7;@@/@7)@######################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4331:2144 4 * 0 0 * * 0 0 ATGGCGGACTTCGAACAGCAATNNNNNNNAATNNNNNNNNNNNNNNNNNN <<9@@@<:@??@??@?@?????9=;?@?=?#2##11:???################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4387:2150 4 * 0 0 * * 0 0 TGAAGTCACATCGCTGAAGTCAACNTAGGACTCGNNNNNNNNNNNNNNCG @CCFFEFFHHHHHJJJGIJEHIJJ#2AFGCHGIJ################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4321:2151 4 * 0 0 * * 0 0 ATCGCGCCTTGCCACTGCAGCAGCNCATCGAGGANNNNNNNNNNNNNNTG @@@DDDDDDF?F?FGBFEB?EF@C#1:DFCGEGB################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4259:2158 4 * 0 0 * * 0 0 CCACCAATTGAAGCTAGTTTTTTATAGCGATTTTCNNCCTANNNNNNAAG 8-(<(@3@########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4369:2164 0 chrX 18079003 22 18S32M * 0 0 CCAGCTCGAAGAGAAGCTAGCTTGGCCGCAGCACGAGCTTTCNNNNNCGC B@CFFFFFHHHGHIGIJJJJJJJJJIJJJGIIIGIGGGHIJI######## AS:i:49 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:24T0G0T0G0T3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4339:2165 0 chrUextra 21596799 1 50M * 0 0 GATGCATCCGATTGGGATACTTTCCAGCCGAGTGGAAGTGCCNNNNAGTT CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJFHIIHHDHHI######## AS:i:88 XS:i:88 XN:i:0 XM:i:4 XO:i:0 XG:i:0 NM:i:4 MD:Z:42C0A0C0G4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4290:2169 4 * 0 0 * * 0 0 CCTGCTCATTAATCTAGGGTTCATATTACTTAAGGCAGAGTCAACATTTT ;<5?############################################## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4497:2169 16 chr3R 1666685 44 50M * 0 0 AGTCGAGCTTGGTTCAACGGTCGCGCTTAATTCGCTATGATATGGTGATA CFDHHHC=IJIHGIIIIJJJIJJJJGJJJJJJJJJJJGHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4462:2176 0 chrUextra 631646 1 50M * 0 0 TTGGGAAGTTTTTGAACATTGGCTCAACTATGCGAGCATTTTTAGATGAG @BCFFFFFHHHHHJJJJJJJJJJIJJJJIJIJJJJIFIJJJJJJJHJJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4253:2180 4 * 0 0 * * 0 0 CAAGATAGCTTATCTGAAGGGGAGTGTTGTGATTGTTTTGGTTTTATGGT ;9;@9?############################################ YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4398:2183 0 chr2L 21539057 1 50M * 0 0 TCCTTTTAAAAACTGAATGGTGGTCCTGAAAAGGACCGATTGCTTAATAG @@@DDDFFDDDHDHIIIGHIGIEIGHFFFD?FDDDDD==C>EFE@DE AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:15G34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4407:2228 16 chr3L 20400887 44 50M * 0 0 TTAGGAATATCCGGACGTTTCGTTTTCGCTTTCCTCTACAATTGATTTCT GHIHGIGFABIIIGFH@GHFBIIGIHGJIJIIGHCIHFGFFHDFFDD?@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4321:2233 16 chr3L 20009611 44 50M * 0 0 TTTTATCTGTTTCCATTATGGATGTCAATGCCTGCTATCCAGAAATTGAG 8???>7?;;)))6:>4<>?9=))8>.;(.44)6@.>.@8).2(973; AS:i:96 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:30A19 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4443:2238 16 chr3RHet 753077 32 50M * 0 0 TCGTTGTCGCAATAAATGGTCTTTGCCCTTGGGGAAAAGTTCATTAGCTG GGGIHGGIHGEFDDHACF>@FBCEHIHF;@IIIIEIGFFFHFDBDDD@@@ AS:i:100 XS:i:85 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4392:2238 16 chr3R 26102281 22 23S27M * 0 0 ATCATATTGAATCATCTGAAGCTAGCTTATTTGGGTTTTGGTGGCAACTT JIJJJJJJIGIGIHFIIJJJHEJJJJJIJJJIJJJJJHHHHHFFFFFCCB AS:i:54 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:27 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4300:2240 16 chr3L 621700 44 50M * 0 0 GTCAATGATGTTGCCGTAGTTGCTTTGCCTGTTGCTGCTACTTTGGCAAT JIIJIIJJJJIJJJJJJIIJIIIJJIJJJJJJJJJIJHHFHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4494:2240 16 chr3L 22204842 40 50M * 0 0 AGTTCAGCCGAGTTCGAAGCCGGGTAAAAATATTGTTTTTAATATAATTT IJIGJIIJJJIJJIJJJJJIJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4252:2241 16 chr3RHet 1954352 0 16S34M * 0 0 ATCCTATATACAAGCTAGCTTGCTATGATATTTTTCCATAATTTCTGTGA IHJJJJJJIHJJJJJIJJJJJJJJJJJHCAFIJJIJJHHHHHFFFFFCCC AS:i:68 XS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4278:2242 16 chr3R 13855559 12 1S33M16S * 0 0 GATATATTTTTTTTTTTTTTTTTGCTTTTAAGCTAGCTTAATACTGATAT #######BDFHIJIJJJJIJIGJJIGIHEJJIIGIHGHHHHDFFFFFC@C AS:i:59 XS:i:46 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:6A26 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4418:2248 16 chr3R 6891966 1 50M * 0 0 TGCGATTATTACAATGATCATTTGTATGTAAAGTGTAATATTGTTCTCTG IJJJJJJIIHFJJJJJJIJIJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4351:2250 16 chr3L 1280735 41 39M11S * 0 0 CATCCTGTGGCATTAAATTGAAATATGAACATGAAAGCTAGCTTTTATCT IIIJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIJJJHHHHHFFFFFCCC AS:i:78 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4614:2103 4 * 0 0 * * 0 0 ATAANTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4659:2105 4 * 0 0 * * 0 0 TTTGNGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@############################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4691:2107 4 * 0 0 * * 0 0 GGGGNGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#22@########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4556:2110 4 * 0 0 * * 0 0 ACATNATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<??######################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4719:2116 4 * 0 0 * * 0 0 TCAANGTCTAANNNATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#22@@@@####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4682:2122 4 * 0 0 * * 0 0 CCACNCACCCCCTCACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<=#2<>;=:?###################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4636:2126 4 * 0 0 * * 0 0 CTATNCCAAATGCGACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<;@?#################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4549:2133 4 * 0 0 * * 0 0 TGGCAGAGATTACCAGTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@?@?@@@@@@@??@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4652:2136 4 * 0 0 * * 0 0 CAACCACCAGTTGGTCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<??;??:????@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4524:2141 4 * 0 0 * * 0 0 CGACTAGCAAATAATAATAAGNNNNNNNNNGGNNNNNNNNNNNNNNNNNN ;;19(@49@?9>??:>@################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4735:2143 4 * 0 0 * * 0 0 TTAATTTTAAAGCTAGCTTATNNNNNNNNNTCNNNNNNNNNNNNNNNNNN <<<@?@@@@?@@@@????@?@############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4589:2147 4 * 0 0 * * 0 0 TAACTTCAAGCCACAAAAAATANANNCATAAATNNNNNNNNNNNNNNNAN <<@???@?@#1##11;????################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4505:2147 4 * 0 0 * * 0 0 TGCAAACAAGCTAGCTTTTGCTNANNCTAATGANNNNNNNNNNNNNNNCN ;<<@@@5(@######################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4572:2151 4 * 0 0 * * 0 0 AAAATTAACAGAAATAAATGAACTNCTCACTTTTNNNNNNNNNNNNNNTG @CCDFFFFDDFFHIIIIIACHIIG#3=BDFA@######## AS:i:46 XS:i:46 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:23 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4579:2164 0 chr2RHet 612044 42 50M * 0 0 GTATACATATTCAACGTTAAAATACGTTTGTTTTTTGTCGCANNNNNCCC ??@DB;DB?A==DH@:CA:CHIEE9EHGGEIIIII<)BB########### AS:i:85 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:42C0G0G0G0T3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4548:2173 0 chr2L 11367421 44 50M * 0 0 CAGATACATCTGAGATCACATACCGGTGAACGCCCATTCGTTTGTAATGT CCCFFFFFHHHHHJIJJJJJJJJJJJHIIIIHIJJGJJJJIIJIHJJIJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4631:2175 16 chr3L 22186952 44 50M * 0 0 TTAGAGGGCTTTGTTGCTGTTTTTGCCGAGCTATTAGAGGTCCGTCGCTC FHHHHHIGEJIGGIJIJIJJJJJJIJIJJJIJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4664:2177 16 chrU 7907541 1 50M * 0 0 GGGCAATTACCCATTTTAGACCATACATTTATGGCAAACATTTCACTATT JJJIIIIFCJJJIJJJIHFCJJJIIJJJJJJJJJJJJHHHGHFFDFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4698:2181 0 chr2L 10897494 44 50M * 0 0 ATAATGTGCTCATGAGCCTATGCATATGCCGCACAAAAGTTGAGTCCAAC BCCFFFDDHHHGHJJJJJIJJJJJJJJJIJJJJJJIJIIHIJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4586:2187 16 chrX 18092455 40 50M * 0 0 TTAATTATGCATATTTATTAAAACTTTAAGCGGTTCACAGCCGCTTTGGC JJJJJIJJIJJIIIJIIIJJIJIJJJJJJJJJJJJJIHHHHHFFFFFCCC AS:i:100 XS:i:42 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4748:2190 0 chr3L 12376829 44 50M * 0 0 ATTATCTAATTAGCATTCTAAACATTAGGTGATTCATTCTCTGGCAATGA @@@DD?D?=CFCB;GEGI@G?FF AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4525:2193 0 chrUextra 19267087 1 50M * 0 0 TGAAGTACATAGCCACTGATATGCGCCCGTTTTCAGTAGTTGAGGACACT CCCFFEEFHHHHHJJJJJIJJJJJJJJJJGIJIJJIHIIJJJJJJIIIII AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4643:2193 0 chr2RHet 1371353 1 50M * 0 0 TGGTGCGAGCCTATTCCGCTGTAGTCACGTGCGCACCGTATGCTACTTCG @@@ADDADFDFHI::?:??FGHIIBGHIDB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4618:2209 16 chr3R 4291392 44 50M * 0 0 GTGTGCGTATGAAATTGTTGTGGTCGCTGCGGTTCCTCTCGCATGCCGCC DDDDDFFFFFFHHHHGIJJJIIJJIIJJIJJJJJIJJHHHHHFFFFFCCC AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:11G38 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4550:2211 16 chr3R 13429371 40 50M * 0 0 CAATATTTTCAATATGTTTTATTTATTTTCTTTATTTAATTTAATTTAAA JJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4703:2216 0 chr3L 4032779 44 50M * 0 0 GGTTTTTGAATACCGCGCCTGGATGGTGTTCTTTATCGAATGGAACACCA @@:DDDFDFHHDHIIIIIIIBHF@CG?FBFBGAA@FE?FHIGG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4683:2221 0 chrUextra 13849399 0 30M20S * 0 0 ATGCACCCTTTCCCTTAGTTTGGATAAGCTAGCTTAGGCCGCTTGTATGC CCCFFFFFHHHHHJJJJJHIJJJJIJJJJJJJIJJJJJFIGIHIIIJJJI AS:i:60 XS:i:60 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4591:2224 16 chr2L 16351499 44 50M * 0 0 GCCGTGTGTTTAGGATTTCCACTGAAATGTATTTATGCCACAGTACGTGA IJJJJJJJIJJIJJJIIIIIJJJIJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4570:2227 0 chr2L 13624 44 50M * 0 0 AGCTGTAGGATTGTAAATTTAATATAAAAGACTAGTTGAGTATATATTAT CCCFFEEFHHHHHIJJJJJJJJJJJJJJJJJIIJJIIJIJFHIHGEIIIJ AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:14G35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4511:2230 0 chr2L 12772904 44 50M * 0 0 TGGAAATGCAAAGCCAAAGAGAAAAGAAAAAAAACCTGAAAATTTACTCT ?@7???DD?FBFD@AEBF;ABGIF>AEF9EF@################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4893:2121 4 * 0 0 * * 0 0 TTTCNACATGTCCGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@@@?@@@???################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4811:2126 4 * 0 0 * * 0 0 AATTNTGATAAGCTAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#4@@@@@@@@@@@@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4989:2130 4 * 0 0 * * 0 0 CGGTGTGGCGTGCTTGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<BDD8+2F>DEEFFD?FFECEGC;C9F;?E@9BFEFADD8FCB??DD:8? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4770:2212 16 chrUextra 1763832 1 50M * 0 0 AGCTCGTTAACATAGCACTCTACCTCTGTTTATTAACAAAGTGCAAATTC GIJJJJJJJJJJIJIGGJIHGCJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4805:2214 16 chr2R 8109225 44 50M * 0 0 AACTTTGTCCTGCTGAGTTTTTCGACAATCATATTTTCATGTTCAACTTC ##?)FB?;CCFGGED<@GIGHF8HF>HBIHFDGCIIIFFHFDDDDAA;@? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4790:2214 0 chr3L 1430127 44 50M * 0 0 TACAAGGGTTAATTAGTGTGGAATACAGGAGTGTCGGCGCTACAAACGGA ?@@BDDDD2AFBFHIICFHHGI>HCHGHHGI?ECBDH:@BAB@CFH=EGC AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:18A31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4850:2216 16 chr3L 4996309 42 9S41M * 0 0 ACAAAAGCTAGCTTTTTCCTCGGACTCTTTGGCTTTTGACTTTTTTTGTG JJJJJJIJJJJIJJJIIJJGIIHHJIJJJJJJJIJJIHFHHHFFFFFCCC AS:i:82 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:41 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4956:2217 16 chr2L 18951198 44 50M * 0 0 GAGTGAGTTTTAAATGAATGTTTTCCACTTATGAACACGCTAGTTACACA JJIHFD3JJJJJIJJJJJJIJJIIHHFJJJJJIGEHGHGHHHFFFFFBCC AS:i:95 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:6A43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4818:2223 4 * 0 0 * * 0 0 CCAGATCTACCTCATTTACAACAAATTTCTGAAATATTGCTTTTACTTTC 8????B?,22A?:C<@>E?E<<;DE@EFA9ED9?B94DA4?D9??D? YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4974:2228 16 chr3L 21401782 22 24M26S * 0 0 TTCAAACGATTAATTCGATAAGCTAGCTTCCTGTGCGTCTATGTTAGTAG GGGIIIJJIJJJIIIIIJIGIJIJIJJJJJJJJIIGJHHHGHFFFFFCCC AS:i:48 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:24 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4922:2229 0 chr3L 24024493 44 50M * 0 0 AATAATGGTTTAGACATAAGAGAGTTGAGATTGGGCATGCAGATGTAGAA @@@DDDDDADFHDIGIGIIIIIDG:?F?AAA>B>BA?1**?=?:<<@?>4@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5243:2139 4 * 0 0 * * 0 0 TGTAAGCCGATCTATTGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@?@@@@@@@??############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5082:2139 4 * 0 0 * * 0 0 AAAAACGGTTGAAGCTAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@?@@@@@??@@??@?@?############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5037:2142 4 * 0 0 * * 0 0 CACAGGGATCTGCAGCACAACNNNNNNNNNCANNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5188:2145 4 * 0 0 * * 0 0 TGGGTGATGCCACTGCCACTAGNNNNNNNCCCNNNNNNNNNNNNNNNNNN <<<@@@@@@@@?@@?@@?@@@@############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5164:2152 4 * 0 0 * * 0 0 CAGTTGTCCAGTTTTCCAAAGTCANCGAACGAAANNNNNNNNNNNNNNTT CCCFFFFFHHHHHJJJJJJJJIJJ#3AFHIIIJJ################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5017:2156 4 * 0 0 * * 0 0 GCTGGCATATAACAGATATCGTACTCCTAAGCTANNNTCTGNNNNNNAAG CCCFFFFFHHHHHJJJJJJJJJJJJJJJIJIJJJ###1:BF######### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5047:2158 4 * 0 0 * * 0 0 TTTTCAAGTGTGATTACACCATATTGAATTGTGGTNNTGGANNNNNNGAA @@@FDFFDFDAA>9*9B@FGG AS:i:100 XS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5240:2213 4 * 0 0 * * 0 0 GCCCCAATTAACAGAGATTAAAGGTGCGAAAAGCTCGCTTGCTTCTAGAT CCCFFFFFHHHHHJIJJJJJJJJJEGHJJJJJIJJJJJIJIIJJJJJJJI YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5096:2214 16 chr3LHet 860379 1 50M * 0 0 GCTGACAAACCCAGGTCTATTTTTTCACCACAAGAGCCCAAGAGCCCAAG GCHD@DIIHIIIHEIGIIGGFBIGGGGGGHGGIHEBGABBFDBDDBF@@? AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5158:2220 16 chr3L 13010282 44 50M * 0 0 TTAAGGCTATGTTAATCCAACTTCAGGTTGCTCAGTCCATAGACCTGGTT JJJJJJJJJJJJJIHEIIHGJJIJIJJJJJJIJJJIJHHHHHDFFFFCBB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5074:2223 0 chr2L 15300174 44 50M * 0 0 AACCAGGTTTTTGGATCTGTCCACTTGGCGGCTTATTTATGGCACGGCGA @@@FFDD=DFFFHGIEHGHHHIIJGGIBGHG<6DF@CHCH<=CCHBBED= AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5017:2224 16 chrUextra 649679 1 50M * 0 0 TAGTCGGCTTAACTTCTCGGTTCCAGGTAGATTCACTAGAAACTATATAC JJJIJJJJJJJHJJIIIJJJJIJJJJJJJJJJJJIJJHHHHHFFFFFB?B AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5095:2233 0 chr3R 15222015 44 50M * 0 0 TTTGCAGGAAGTTGTAAAGTTCCTCCACTTAGCTTGGTTATTATTCCATC CCCFFFFFHHHHHJJJJJJJIJJJJJHIJJJJJJJJJHIIJJIJJGIJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5058:2240 0 chr2L 5917513 36 14S36M * 0 0 AGAATTGGCAAGCTAGCTTGTGGGACACGGATCAACACCCTGTCCACAGG @@@FDFFFDDDHDHGIIFJIDGIIGEHIDHHIJJJGIIIIIJ?DFFHGGI AS:i:72 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:36 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5212:2242 0 chr3R 26653981 44 50M * 0 0 CAAATCGCAGTCTGCGAAATCCGTTCAAAGCTCGCGCCAATATTGCTCCA BCCFFFFFHHHHHJIJJJJJJJJIJJJJJJIIIIGIIJIIGIIJIJJJJG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5003:2244 16 chr3L 17016225 42 7S43M * 0 0 ATAAGCTAGCTTCTCTGCAGTTTATTCGTTAATTAAAGCAACATAAAATC JJJJJJJJJJJIJJJJJJJJJJJJJIJJJJJJJJJJJHHHHHFFFFFCBC AS:i:86 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5178:2245 0 chr3R 24613072 44 50M * 0 0 CCGAACCCCCTGCACTTTTGCCAAAATACACATTTTAGCTTAATTTGCAA @CCFFFFFHHHHHIJIJJJIIJJJIJJJJIEDHIIJIHIIJIJIJIIIJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5261:2103 4 * 0 0 * * 0 0 AGTANGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<;@#2@########################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5293:2103 4 * 0 0 * * 0 0 GTTTNTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@############################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5343:2106 4 * 0 0 * * 0 0 TGGCNTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2=@########################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5432:2111 4 * 0 0 * * 0 0 TCTANACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@@??@@?@??@??#3##4:@@??################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5492:2154 4 * 0 0 * * 0 0 AACTTACATACGCGGCGGGAATAANGGGATTAGANNNNAGNNNNNNNNAT CCCFFFFFHHHHHJJJJJIHFFFF#,;??BDDDD################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5469:2154 4 * 0 0 * * 0 0 TTCTCCACTCCACGCTCTCCGATCNACACTTTCTNNNNGCNNNNNNNNCT @@@DDDDDHFHHFIIAGGGHGAEG#1:?BHHGGI################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5441:2160 16 chr2L 3393585 22 9S27M14S * 0 0 TTANNNNNNTGAAGCATGCCCACTTTTACACAAGCTAGCTTTCATATTAT #########IJJJJIIGGGHFEGGIIGGCFGIEDEEHFHHAFFFFFFC@@ AS:i:54 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:27 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5271:2165 16 chr2R 19545676 42 50M * 0 0 TCCNNNNNAATTGATAGTGGTGTCTGCAGTCGACCGATAGAGGCACTTGC ########JIJGJIIIIJIIGIJIJJJJJJJIHJJJJGHHHHFFFFFCCC AS:i:85 XN:i:0 XM:i:5 XO:i:0 XG:i:0 NM:i:5 MD:Z:3T0G0G0C0T42 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5327:2165 16 chr2R 17856976 28 8S42M * 0 0 CTANNNNNACATAATATAAATTGTTATTAACCTATTGTTTTATCCTTCAG ########JIJGJIJIJIJIIIIJJJJHHHJIJIJJJHHGHDDFFFDC@@ AS:i:69 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:25T7T8 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5349:2168 16 chr2R 16606619 44 50M * 0 0 TTTTCNNAACAAATTTTTACATTAGCGCAACAACTTATTGTGATCAATTT HFB00##JJJJJJJJJJJIJJJJJJJJJJIJJHJJJJHHHHHFFFFFCCC AS:i:94 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:5C0A43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5393:2168 0 chr3R 24701124 44 50M * 0 0 AGCGTAATATTTAGATAGATTATTTTAGATTGGTCAGTACTCCNNCATAA CCCFDDFFHHHHFIHHIJJIJJJJJJJJIIIJIJJIJIIIIJJ##0:BFH AS:i:94 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:43A0A5 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5455:2172 16 chr3RHet 1181935 1 40M10S * 0 0 GACTAACTTAAGTATAGCAAGAGTTCTTATCTCTAAAGCTAGCTTAATCT IHJIHHJGJIJHGIIJJIJJJIIJGJJJJIIGJIJJIHHHHFFFFFFCCC AS:i:80 XS:i:80 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:40 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5428:2176 0 chr3L 18706310 1 50M * 0 0 ATGTTTGCCATAAATGTATGGTCTAAAATGGGTAATTGCCCAATGAATTG CCCDFFFFHHHHHJJJFHJJJHHIIJJJJJJJAFHIIIJIIIJJJGIJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5482:2177 16 chr2L 14149607 44 50M * 0 0 CACAAATGCGCCAGAAGTATTAAGCCAGGAAACGCAGCCCTCCAAAGCCA HFJJIHEIJIJJJJJJJJJJJJJIJJJJJIJIJJJJJHHHHHFFFFFCCC AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:5G44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5300:2177 0 chr2RHet 518815 0 20S30M * 0 0 TTCCTTCAGACTCTTCAAGCTAGCAAAGTGTGGTGAAGTAGTCCACACAC CCCFFFFFHHHHHJJJJIJJIJJIJJJJEHCHHDHIJJDHHEIIJJIIIJ AS:i:60 XS:i:60 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5256:2178 16 chr2R 16631549 1 50M * 0 0 TAAATTATTAGGGCCGTTTAAACATAGAACAGTTGGAAAAATAATACAAC HJJJJIIIIGJJJJIGJJJJJJJJJJJJJJJJJJJJJHHHHHFFFDFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5386:2183 0 chr2L 22713806 44 48M2S * 0 0 ACTTCCCAACCTGGAAGTACTGCCGTCACAGCTGCGAGCCCAGCGCTGCA @@<=BDBDF;DFDFFD>2<;1CDF8:?D:D@FHEHID@G AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5368:2195 16 chr3L 18842721 44 50M * 0 0 TCATTAACAGGCCATATTAAATTTCATTGAAGGGAGGAAGAACAAAGCGG IHGHFHFJIJJJJJJJJJJJJJJIJJJJJJJJJJJIIHHFHHFFFFFCCB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5289:2198 0 chr3L 17697464 2 24S26M * 0 0 CTGGTTGTCCTAAGCAGCAAAGCTAGCTTATCCAGTGAATTAACCATGAC BCCFFFFFHHHHHJJJJIJJJJJJJJJJJIJIJIJFHGIIJIJIJIIJJJ AS:i:52 XS:i:48 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:26 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5429:2207 0 chr2L 16879186 44 50M * 0 0 ACTTAGACAAGGGTCCCGTGCCTTTAGACATTTTTAAGAAAAACTAAAAA CCCFFFFFHHFHFHIIIGCFBH>EHCBC9DFHIII@B4BFGII:BDGHIG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5401:2207 16 chr3R 27675416 44 50M * 0 0 GAAGTGGTTGTTGTGAAAGGGTCCAACTGGAATCGTTAACGTATTCTGGG IJGIGIJIJJIGJJJJJIJJJJIIJJJJJJJJJJJJJHHHHHFFFFFC@C AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5459:2210 0 chrX 16679283 41 11S39M * 0 0 CAAGAAAAGCTAGCTTAAAGTAAATAAACTAATTCGCTCCAGGCGAATAC CCCFFFFFHHHHHJJJJJJJJIJJJJJJJJJJJJJJJJJJIJJJJIJJJJ AS:i:78 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5272:2214 0 chr2L 18722280 44 50M * 0 0 GCCAGTTTAGAGCCCAGAGATAATCAATGGCCGCACTTGGTAATTATCGG CCCFFFFFHHHHHJIJJJIJJJJIIJJJJJIJIJIJJJJJGHIIJIJFGI AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5424:2223 0 chr3R 3558023 1 10M4I36M * 0 0 ACAGCATCAAAGCTAGCTTATACCCGACTTTGACGGTAAGGCTGAAAACT @@@FFDDFHHHHGIGHHHIJIIJJIIGHIIIJIIHJ?DFFHGIIGIIJIG AS:i:75 XS:i:75 XN:i:0 XM:i:0 XO:i:1 XG:i:4 NM:i:4 MD:Z:46 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5290:2227 16 chr2R 7593588 40 50M * 0 0 AGTTCCCTAATTAGGAGAGGAATGCATATGAGACTCTTTTTTTTTTTTTT BBB>6(>3;B>B?;;.;;AA;;77.4;7)78@83;:FFFFFFDDDDD@@@ AS:i:96 XS:i:40 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:5A44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5263:2234 0 chr3R 1354288 36 14S36M * 0 0 CCTTTTGTAAAGCTAGCTTCGCTCCATCGGCGACTACGTGGTTGTTGGTG @@@FDEDDFFDFDHFFHEHDFHFHGHGGIHFEDEAGDH;FD(;@@C6=5; AS:i:72 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:36 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5315:2236 0 chrX 5375348 1 50M * 0 0 ACTACAAACTATTAACAAATATTGCCACCAACAGATTTGGGGGCGTAGCA CCCFFFFFHHHHHJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJHHFFF AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5429:2238 0 chrU 3114641 1 50M * 0 0 AGGACGAGAATCTACCCCCAATGAGATTCGCCTTTGGCGAGCGGCATGCA @=@?D<:DHHA>F:CFEB@GCEFE>DB*CC::FD9DB############# AS:i:92 XS:i:92 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:41A1T6 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5356:2241 16 chr2R 18233158 44 50M * 0 0 AATAGCAGAATCAGATAGCAAGGGAAGATAGCAAAAGAGATGTCTACACA JJIJIJJJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJHHHHHFFFDF@CB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5472:2248 16 chr3R 12332425 36 36M14S * 0 0 ACTTAAATGCCAAGCCGAAAAGTCTGTGCAAAAGCTAGCTTTTATTCATT @GF?IIHGDJIJJJIJJJJJJJJJJJIJJJJJJJJJJHHHHHFFFFFCCC AS:i:72 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:36 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5402:2250 4 * 0 0 * * 0 0 AAAACCGAGAACAAGAATGCCTATTTAAAAAAAACTATAAGATATGAAGG ;<<@55(@########################################## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5736:2103 4 * 0 0 * * 0 0 TTTGNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<??######################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5712:2121 4 * 0 0 * * 0 0 TAATNTTTTGTATNTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2=@@??@@#2@################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5748:2124 4 * 0 0 * * 0 0 GAATNGGAAGGCTAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@???@@?@?################################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5690:2126 4 * 0 0 * * 0 0 ATACNAAACAAAAATATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@@@@@@@?@@@?################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5546:2126 4 * 0 0 * * 0 0 TGGTNTGACTAAAACTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@#2@@@@@@@????@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5651:2135 4 * 0 0 * * 0 0 AAATAACTTTAAGCACATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@@@@??@?@@@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5730:2137 4 * 0 0 * * 0 0 CCTAAGTTTACTTATTAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@@@@@@@@@?@@@@??############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5669:2146 4 * 0 0 * * 0 0 TCTTAAACTTGGGAACGCTTTCNNNNGCNAGCNNNNNNNNNNNNNNNNNN <<<@?@@@@@?@@?@@?@@?@@############################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5618:2154 4 * 0 0 * * 0 0 CGGTAAAGAACGGATTCCGTTGATNTAAAGAACTNNNNCANNNNNNNNAG @CCDFFFFGGHHHGIJJJJHJJJI#1?FHIGIJJ################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5741:2156 4 * 0 0 * * 0 0 AAATTGTTGTAAATATCAGAAACTNGAATGATCTNNNNGANNNNNNNAAA @FGGI#3<87?B?9?<@?AABAABAABBABA4IIEE@ECCA9EE;A3CEA+2:DD??<@################################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5850:2131 4 * 0 0 * * 0 0 GGGGGAGCGCCTTCAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<?>>@==?8><@############################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5917:2138 4 * 0 0 * * 0 0 ATAAATACCGTGGAATAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@?@@@@@?@@@>@=@@############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5955:2140 4 * 0 0 * * 0 0 AACTTAAGCGAAAGCATTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<<@@????@@@@@?@@@@?############################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5759:2141 4 * 0 0 * * 0 0 TTTTTATCAACATGAAGAAAANNNNNNNNNNANNNNNNNNNNNNNNNNNN (;;?############################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5877:2142 4 * 0 0 * * 0 0 CACACTGCCCAAAAATCAACANNNNNNNNNNANNNNNNNNNNNNNNNNNN <<>????@?############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5800:2142 4 * 0 0 * * 0 0 CAGCGCAACGACTGAGAGCGANNNNNNNNNTTNNNNNNNNNNNNNNNNNN <<EAE0;FE################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5872:2158 4 * 0 0 * * 0 0 CGTCTGTAGGTTCCCATTGGACTTCCCATTATGGANNAATANNNNNNTTC @@?DDDDAHFCFHIAA@?2+2+3@C=3AAAA>>; AS:i:50 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5957:2167 0 chrUextra 228741 44 50M * 0 0 TTTGCGGAGTTGCTGCATGGAATGTATTTAATCGTCTGCTTTNNNNCCTG =@@E+?E4?FF<99C98:0:B*9BD######## AS:i:88 XN:i:0 XM:i:4 XO:i:0 XG:i:0 NM:i:4 MD:Z:42T0T0C0C4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5976:2169 0 chr2L 9509139 44 48M2S * 0 0 TCAAGTGAAGCCAAAGCTCAGGGTAGAGTTTTGCTCAGGGACANNTTAGG CCCFFFFFHHGHHJJJJJJIJJJAFGFHFHIIIJIJIIJJCHH##00?DH AS:i:90 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:43A0G3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5755:2170 16 chr2L 22943771 16 19S31M * 0 0 TAAGTACATTAATTAAAGCAAGCTTTCCCAATTCAAAAAACTAAAAAGCA JJJJIIJJJIJJGJJJJJJJJIJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:62 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5774:2172 16 chr3R 7552574 44 50M * 0 0 GTAGCCACTGCAACCTGCAGCTATTATCATGCAAAACCCGGCACCATTAT BCGCB@BIHCHGBDJJJJIJIIGIIEBHHEGIIIGFFFGHGHEDFFF@@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5837:2172 16 chrUextra 577199 1 50M * 0 0 AACACGTGCGGAGTGGAAAATTTCCAATAATTTATTGTTAATAACTTCCA GDGBIIGJIIHCGDIGIGIIIJGGGHHIGHJIJJJJIHFHGHFFFFF@C@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5915:2173 16 chrX 9952736 0 25S25M * 0 0 CTTTCAAAGCCTTTTGGTTAAAGCTAGCTTTCCATATACTTTTGGTCTAG IJJIJJJJJJJJJJJJJJIJJJJJJJJJJIGJJJJIHCHHHHFFFFFCCC AS:i:50 XS:i:50 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5887:2179 16 chr2L 18170258 44 50M * 0 0 CTCTTCTCTGCACGGCCAAAAAAGAAAACTCTTGATGCGCCTGGTTAGCT HHIHEGGIHIHFIJIJIJJJJJJIIJIGHGJJJJJJIHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5800:2182 16 chr2L 20198232 1 10S40M * 0 0 AAGGAAAGCTAGGTTTGTAAACAAAATTTTCGAGGATCTTATAAGGGATA IIGEIIIHCGGJIJJJJIIHHAIIIIEGIGGIJJIHEHGHHGFFFDD@CC AS:i:80 XS:i:80 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:40 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5866:2183 16 chr2L 5890309 41 10S40M * 0 0 AAGAAAAGCTAGCTTTAACAATGTTCTAAGGATAAAAACATAAATGCCAT IJJJJJJIJJIJJJJIIIIJJJJJJJJJJJJJJIJJHFHHHGFFFFFCCC AS:i:80 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:40 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5951:2185 0 chr3R 17594179 1 50M * 0 0 TAATATTATTATTATTATTGTTATTATTATTGTTATTATGTTCGTATATA CCCFFFFFHHHHHIJJJJJJJIGIJIJJIJJIIIDHIEIHIJIJIIIJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5768:2190 0 chrU 2546978 1 50M * 0 0 TTTCGCTTTTAAAAAATTGTCAGATGAGAGACAAATTAGAATTAAACATA CCCFFFFFHHHHHJJJJJJHHIJJJJJJJIIJJJJJJJIJJJJJJJJJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5918:2199 16 chr2R 5615779 1 50M * 0 0 ATTGAAAAATTACCTACACACATTTATTTAAGAATAAATAACCACAACAT JJHIJJJJJHGCJIIFFCHFJJJJJJJJIJJJJJIJJHHHHHDDFFFCBB AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5962:2201 16 chr3L 12515324 44 50M * 0 0 TTGCGACGGAAACGGGCGGAAGCAGATGCCGCCGATGGGTTGGTTTTCCT B??>BC?C>DBBBEGB>HCHGFDHGIGEIIIJJIJIIHHHHGFFFFDCCC AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:21A28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5870:2202 16 chr2R 18104969 44 50M * 0 0 TCGTTGTTATTCAGATTGGATGTGCTTAGTTAGTCTTCGATGATGTTTTT D??03A>BB@3@@3@839&)0HHC9@@DAHDHEBC?EFF??DDD?D@?7 AS:i:64 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:32 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5817:2228 0 chr2R 5296467 44 50M * 0 0 TAAGAGAGTCTAGTGCGAAGAGCGAGGGCAAGAGAGCGAGAGAGCAAGAA CCCFFFFFFHHHHHIJJJJIJJIGJJJJIJJIIIGGFIFHGGHHDEHGHF AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5856:2230 0 chr2L 11982030 44 50M * 0 0 GGATACACGATCTTCGGAGATGCGATCTTTATGAATGGAGTCTACAACGG 391@<<:7;8?>>?#################################### AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5791:2233 0 chr2RHet 2295693 1 50M * 0 0 AAGAAGACAGCCGAAACCAAAAATAAAGAAGAAAAGAAGCGGCAAAAGGA CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJIJIJJIIJIJIJJJIHG AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5870:2235 0 chr3R 25502781 44 50M * 0 0 ACGCCATTCCGCTTAACTTCCTGACCAGAGTGCTGGAGGAAGCCATCGGA @@CFDFFDHHHHHIGJIJJJJJJJIGGHGI?GGGIJCHGDCCGHEGIGIE AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5957:2236 0 chr2LHet 286479 17 50M * 0 0 TTTCTGAAGTTGCTGAGAGCGGACGAGTTGAGAGGGGGAGAGCTGAGAGC CCCFFFFFHFHHFHIIGIIJJICGHDFDHHDGBF(?FH@=A?BCDACA@A AS:i:96 XS:i:82 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:34T15 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5835:2238 0 chr3L 19168274 44 50M * 0 0 GAAAAAATTCACTTAGCTTTTGCTCTACAAATTACTTGGCCCAGATGTTG @CCFFFFDHHHGFJIIJJJFIIJJJJJHGIJGEHIIIJGJJJJJCGGD@?@@@##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6121:2121 4 * 0 0 * * 0 0 TAATNGGTTGTGANATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN <<@?????<??############################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6140:2157 4 * 0 0 * * 0 0 TGGGCAGTAGAGTGTGTTGGAAGTATGTGTTCAANNNGGCGNNNNNNAAC BCCFFFFDHHAHCGEHIIIFFHHEHIHCHIJJIG###2:?F######### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6220:2160 4 * 0 0 * * 0 0 CTGAGTATCCTTTTTCAAGTAACTCGTCTTTATCGNATTTGNNNNNNTTA ################################################## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6080:2161 16 chr2L 20418636 42 9S41M * 0 0 CTTNNNNNNAATACTTTCGTGTACATTATTGCAAATTTTAGGCTTTGGAG #########JIHDJJIIJJIJIIJJJJJJJJJJJJJJHHHHHFFEFFCC@ AS:i:82 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:41 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6107:2165 0 chr2R 1793463 0 22M28S * 0 0 TCCTGTCAGTCCAAGAAAAGCTAGCTTCAAGGAATGCGAACCNNNNNTGG CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJIJ######## AS:i:44 XS:i:44 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:22 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6008:2166 0 chr3R 7743490 41 50M * 0 0 GACGGTCAGTCCGAGAAGCATCTGGAGCCGATGGCCAGTTTCNNNNNGCG @@@FFDDDHAHFFFHIJIGIJEIGGGGGHGHIHIFGHJEHDI######## AS:i:77 XN:i:0 XM:i:6 XO:i:0 XG:i:0 NM:i:6 MD:Z:16G25G0G0G0G0C3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6164:2167 0 chrU 1886379 2 14S36M * 0 0 CGCATTTGAAAGCTAGCTTTCTAGTTTCACTTGTTTGTTTTTNNNNGTTT B@CFFFFFHHHHGJHIIIJJJJIJIIJJJJIJIIIJIGIJJJ######## AS:i:60 XS:i:56 XN:i:0 XM:i:4 XO:i:0 XG:i:0 NM:i:4 MD:Z:28T0T0T0T4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6028:2168 16 chr3L 23880171 0 27S23M * 0 0 AGGAANNNGGACACTATCGAAAAAGCTAGCTTGCAAAGTTCAAATGACCG ?B800###IIHC9;AEEE?G@=@@@/A:=11?ECGF?B9<==F>C)=@D>F@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1283:2201 16 chr2L 14381348 44 50M * 0 0 GTACTAACTATTTATTTACACTATGCAATAATGTGGTTCTTTTAATACAA JIIIIIFGDGEEIJJJIIHHJHJJJJJIIJJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1388:2206 0 chrUextra 552761 1 50M * 0 0 CTATGTGATCCTTGTAATTACCTAATGCTAATACCGGTGGCTCGATTAGT CCCFFEFFHHHHHJIJIIJJIGIJJJJJJJJIJJIJJCHGGIGE0?F;ED AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1367:2206 16 chr2L 51051 1 49M1S * 0 0 GCATAATTATGATCCATAAGACTGGAAAAACACCGACAGACGTTGACTCA EGD?FB9FD??:9HGD>IGH?GE@>HGGGFIJGGGHHFDFHFEFD=F@@@ AS:i:98 XS:i:98 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:49 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1425:2211 16 chrUextra 27145690 1 50M * 0 0 ACAATAATCCAAAACGGCCCTTTTCAGGGCCACAATGTGTTATACCAAAG HIIGEIGDJIJJIHIIGJJJJJJIJJJJJJJIJJJJJHHHGHFDFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1474:2219 0 chr3RHet 113383 1 50M * 0 0 TTATCTTGAATAAAAATAAATAATATTACAAACAACGATATAGAACAATC CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJIJJJJJJJJJJJJJJJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1352:2219 16 chr3L 14781768 44 50M * 0 0 AACGCCCGTTTGAGTAAGATAACCGAGGAAACAGCTAATCTCAAGGTGAG F@FFGFG>GBC??C?C?*??C1GGB@@BHEEDCF@IFDHD8?FFDDD@?@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1280:2226 0 chr3R 17377498 44 50M * 0 0 TGTTTCGGGGTTGGTTGCTCGGCCTGTGTATTTGTGCTCCATCCTCCATC @C@FFFFFHHDHGIHIIIJIIJIIFGGFBBFHIEDGCHGIHIGGIGHGIG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1390:2230 0 chr3L 7232809 44 49M1S * 0 0 TCCGTTTATCGGATCGATTTTCTGGACAAACACGTCAACGGACACGAGGG B@@DDFFFHHHFFDHJBGHGIHIIEGHGFI@G;@BB@G@GG=FBCH8@B# AS:i:98 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:49 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1327:2231 16 chr3L 1600677 44 50M * 0 0 TACTTCAGCAAGGCAACCAAGGAAACGTCTCTAACATTTTATTTTTAAAA 0B909F?3@ED9?)C*HFFA+2;HFA:C+AIHDGEA:DF?C+DBFDA?== AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1450:2234 16 chr3L 6892431 44 50M * 0 0 CCGAAAAAAGAATGGCAAAGGGGGGTGAAAATGGCAAGGGGGTTAAAAAC E;@JJJIHFFHFBIHCJJIJJJJJIJJJJJIIJJJJJHHHHHFFFFFBB@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1507:2100 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1634:2101 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1568:2103 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1599:2105 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1670:2105 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1701:2108 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1545:2108 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1559:2116 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1604:2118 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1579:2121 4 * 0 0 * * 0 0 NNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1626:2121 4 * 0 0 * * 0 0 NNNNNNNNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1739:2122 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1507:2123 4 * 0 0 * * 0 0 NNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1661:2125 4 * 0 0 * * 0 0 NNNNNNNANATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1710:2125 4 * 0 0 * * 0 0 NNNNNNNTNTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1529:2130 4 * 0 0 * * 0 0 NNNNNNTAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1646:2136 4 * 0 0 * * 0 0 NNNNNGCAGTTTANNNNNNNNNNNNNCANNNNNNNNNNNNNNNNNNNNNN #####22ADDFHD##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1606:2142 4 * 0 0 * * 0 0 NNNNNCCTAAAAAANNNNNNNNNTANTTTTACNNNNNNNNNNNNNNNNNN #####22=A;DDFG#################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1515:2149 4 * 0 0 * * 0 0 NCGNNGAAAACAAGCNNNNTTGAATTTATAATNNNNNNNNNNNNNNNNNN #1=##2=BFHHHHJI####32AFGIJJIJJJJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1586:2154 4 * 0 0 * * 0 0 NCTNNTACTCGCAGAGCNTATGGTCCCATTATTANNNNNNNNNNNNNNNN #4=##2=DHHHHHIIJI#2AFHJHIIJJJJJJJI################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1710:2156 4 * 0 0 * * 0 0 NTTNNATTAACTTTTTTNTTACGGTGTTAAAGCACNNNNANNNNNNNNNN #1=##2=BFFHHGIJJJ#2AFGHICGIIIJJJIJJ############### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1668:2158 4 * 0 0 * * 0 0 NTTNNTTTTTTGAAAGTGCAGAGAAGCTGACAAGAANNNGNNNNNNNNNN #1=##2=BFHHHHJJJFHIIJHIJIJJJJJJJJIJJ############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1627:2162 4 * 0 0 * * 0 0 NATNNCTTATGGTATTGGGTTTTGATGCAAGCTAGCTTTCTANNNNNNNT #4=##2=BFHHHDFGHJJJFHIJJHJJJJJJJJIJJJJJJJI######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1698:2167 16 chr3R 26903181 1 6S44M * 0 0 ANNNNNAAATAATATAAAAGTGCGTTCCCAATGGGAGCGCGCCTCTTCCA ##########HGGF@788AAF??83B)B:D?)C8?C1DDA=ABA2+1?;: AS:i:84 XS:i:84 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:20T23 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1741:2171 16 chr2L 4708433 44 6S44M * 0 0 GCTANNTTTATTTTAGAAATTTCGGGAGGTGCTACATTTTATTTGTATGT GB70##IJIJJJJJJJIJJJIIJJJJJJJJJJJIIJJHHHHHFFFFFCCC AS:i:88 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1518:2174 16 chrX 16298371 41 39M11S * 0 0 TTGATTTTCGATCAGCTTAAAAGCTAACGCCATAAAGCTAGCTTCTGTGG IIHBJJJJIJJJJJJJJJJJJJJJJJJJIJJJJJJJJHHHHHFFFFFCCC AS:i:78 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1719:2175 16 chrX 8719229 36 29M2I3M1D16M * 0 0 GAATTGCACAATTTGTGACCACGATGTTCCGCAAAAATTTGTTCAATTTG IIJGGHGHIIIJIJJIHFIGIJIIJJIGJJJJJJJJJHHHHHFFFFFCCC AS:i:70 XN:i:0 XM:i:1 XO:i:2 XG:i:3 NM:i:4 MD:Z:32^C3G12 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1578:2181 16 chr3L 5685612 24 1S31M18S * 0 0 TCGAGTCGTGTCGAGATTCCATGTTATATTGCAGCTTCAATTTGTTAAGT GGIGHEJJJJGJJJJJJJJJJJJJJJJJIJJJJJJIIHHHHHFFFFFCCC AS:i:62 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1686:2183 0 chr3R 164474 44 50M * 0 0 AAGGGAAGTTACATTCTATTTAACAAAATTGAAAAATATTGAAATTTTTG CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1648:2194 16 chrUextra 19390591 1 50M * 0 0 CCTTGAAGGTGCCTATATCAGTCAAGGTCTCAGCCAGTCTTTAGCAAATA IIJJJJJJJIGJIIIIHHJJIHJJJJJIJIJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1594:2201 0 chr3L 12720945 44 50M * 0 0 GGCCTGTCTTTTGTAAACACCCATTAAACATCCGCTCTCTGTTCGTGTCG @@@FFFDFHHHHHGHIHIIIJIJJIJJJIIIJIIJGHGGIIHGIJHIIII AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1728:2202 0 chr3L 19517722 44 50M * 0 0 TAAAGTTCACACGCACCCACAAAGCTGCCTGCGAAATTGGCCACCAACCG @@CDDDDFFGGHHIIJEIJIIEHGHIJJJIIIJIGJJJIIIIFIIJIJI> AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1669:2204 16 chr2L 21605250 44 50M * 0 0 GATTAGGATTTGGAAGATCGGTCTGAATCGCGACGAGATCGTAAACAGCT AEC?@@3;HE@CAGEB@0IEFAGBHIGGGHF?AC+3EA4A+>?>@>>BBFDDBDB;?C@IHDFAHDJHHE?IIJJJJJHFJJIHHFFHFFFFFBBB AS:i:86 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:26C20 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1713:2248 16 chr2L 9446752 44 2S48M * 0 0 CCAAATATGTTAGAGCTGTCATGACCCTAATGACCGTGGGAACTTTTTTA JJJIIIJIJJJJJJJIJIIJIIHDJJJJJJJJHJJJJHHHHHFFFFFCCB AS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:48 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1955:2100 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1822:2100 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1916:2101 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1795:2104 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1987:2110 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1809:2116 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1784:2119 4 * 0 0 * * 0 0 NNNNNNNNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1761:2121 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1984:2124 4 * 0 0 * * 0 0 NNNNNNNNNCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1834:2130 4 * 0 0 * * 0 0 NNNNNNATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1946:2133 4 * 0 0 * * 0 0 NNNNNATAGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####222A?D####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1810:2136 4 * 0 0 * * 0 0 NNNNNTAAAGCTANNNNNNNNNNNNNNCNNNNNNNNNNNNNNNNNNNNNN #####22AFHHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1920:2137 4 * 0 0 * * 0 0 NNNNNTATTTTTANNNNNNNNNNNNNGAGNNNNNNNNNNNNNNNNNNNNN #####22AFHHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1961:2141 4 * 0 0 * * 0 0 NNNNNCTGGAAAANNNNNNNNNNCTNCGCNANNNNNNNNNNNNNNNNNNN #####22ADBFBF##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1994:2145 4 * 0 0 * * 0 0 NGANNAGCAGGGAGNNNNNNNNTACCTTACCCNNNNNNNNNNNNNNNNNN #1=##4=BFHHHHJ########11:CHHFHII################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:1779:2148 4 * 0 0 * * 0 0 NATNNTCATGTGCGNNNNNAAGAAGAAAAGGTNNNNNNNNNNNNNNNNNN #1:##22ACBC?FE#####322JJIHBJIGJIJJJJJIJJJJJIHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1886:2177 16 chr3R 24075768 1 50M * 0 0 TTTGCGCTGCTCCTCGCACGTTTTCTTATTTGCCATCTGTAGTATTGGGG IJJJJIJJIIIIIIJIIGJJJJJJJJJJIJIJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1975:2184 16 chr2R 12515694 44 50M * 0 0 ATACAGGAATCGAGAATCCTAAATTAAAAAAATATCCTATGTTAAAAACA IFBHF?CFFF?GHFDBD?:?? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1779:2186 0 chr2RHet 217625 44 50M * 0 0 AAGGTCGGCTGCTTGCTTTTTCTGCCCTCTTACTCCTTTTAAACCAAATA ;??<=2=?DFF1F?C:EHB?BB?DC;EFGHEHIIIJD AS:i:66 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:33 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1835:2219 4 * 0 0 * * 0 0 TTAGGGGGTGCAATAAAATAAGCTAGCTAAAGATCAAAATAATATGGCCT @@@FFADFH>HHFDFADDB=8<@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1751:2222 0 chrX 10378403 36 35M15S * 0 0 ATGTACCTGGTACTCGTGGAGTTGCTTATTAAGCTAGCTTCATTCGTTGG CCCFFFFFHHHHHJJJIIJGIHGIIJJHIJJIJJJJJJJJJJJJJJHIJI AS:i:70 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1795:2222 0 chrUextra 4256624 0 22S28M * 0 0 ATGTGGTTATGTCAAGAAAGCTATCTTCCAAATATTCCCTGCCTAACAAA BCCDFFDFHHHHHJJJIJJJJJJJIJJJJJJJIIJJJJJJJIJJJJJJJJ AS:i:56 XS:i:56 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1882:2228 16 chrUextra 12485614 1 50M * 0 0 TATATAATCGCAAACAAATTCTTTAATAAAACGATGCATTTATGTATTTT JICFFEGJJJJIHBHDJJJIGIGHEE@JIGEHIHHFGDHFDDDFFFFB@@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1975:2233 0 chr3L 19175305 24 11S31M8S * 0 0 AAAAAAAAGCTAGCTTCACATATTTCTGCTAAGTGAAAAAAATGATATCG C@CFFFFFHHHHHIIIHIGGIGHIJGIHGIIJIBFFIIIIIJEHGHGGGG AS:i:62 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1933:2239 0 chr2L 16926457 42 50M * 0 0 CAACTACTGTAATTAATGGGAGCCCACATTGCTTAGATATATTCTAAGAC CCCFFFFFHHHGHJJJJJJJJJJJJJJIJIJJJJJJIJJJJJJJJJJJII AS:i:84 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:16C10T22 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1859:2240 16 chr2R 15044293 40 50M * 0 0 GCCATTTGCGGGGCACTTTTCGATTTTCATTTGGGTTTTCCACTCAGCTG GEIGIHGGFIJHED9JIJJJJJIJJJJJIJJJJJJIHHHFHDFFFFFCB@ AS:i:100 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1897:2241 16 chr2R 14691392 44 50M * 0 0 AGACACGTTTCAAGGCACGTTCATGTGTCGACTGGCTGGATCGCGAATCT IHHF=CGHGHJJIIGIFJIJJIGIIIIHIHFHIIJIFHHHHHFFFFFCC@ AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:34C15 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:1831:2243 0 chr2L 21232120 12 21S29M * 0 0 CCAATGCCGCGACGATATGCCAGATTGACTTTTATACTAAAACGGCTACC @@BDFDDEHHFAHHAG=GHI*?BFHII39BFGG=CH>=DHCCA@;HFB@@############## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2136:2178 0 chr2RHet 617868 42 41M9S * 0 0 TGGTGACACCAAGAACGAGGTCGTCCATCAATTAGAAAGCTAGCTTTCGC ?@?DDFFDD?FHDEHGGFHGGIIFC>GHGFIIEB1@ AS:i:82 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:41 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2057:2180 0 chrUextra 24057186 1 50M * 0 0 AAGGTTCAAACTGAAACCGAGGATAGCCATCGTCTACTAACCAAATTCTT B@CF=DDFHHGGGJIIIGI@FE?CFHEGEHIIGGIHIIGGGHGJGHHJIG AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2242:2181 16 chr2L 3049218 44 50M * 0 0 AGCTTATTATACATAAAATACTATTTATTTAGAAGCTAACCTATCAATTT ?*?C<9F?C4?**FDHDD@DD??@ AS:i:96 XS:i:83 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:19A30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2039:2195 0 chr2R 1354326 0 28M3I19M * 0 0 ATTTTTTCACTTTTTTATTTGTCTTGTAAATTTTTTATTGATTTGCACAA @@CFFFFFHHFHHJIIBHIJJAFGIGEFGGIIJJJJDGGCHGIJJGIIII AS:i:65 XS:i:65 XN:i:0 XM:i:2 XO:i:1 XG:i:3 NM:i:5 MD:Z:31G1C13 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2079:2199 16 chr3R 14375697 36 40M10S * 0 0 TTAGGATGATTCTAGTTTCTAGCTTCAGTTTTACCCATTTAGTAACCTCT IJJIGEGIIJHFHHAHFEJIIGIJIHDEJJHGAJIIIHHHHHDDAFF@BB AS:i:72 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:35G4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2099:2201 0 chrX 1370857 44 50M * 0 0 CGGGCAACTTTAAGAATGGAACGGCTTTGGACGGAGCTTCCGCGGGACGG CCCFFFFFHHHHHIIIJJJGICHIIJIGIIJIIJIIIIIJJJJIJFGEHBHF@JIEHHEBEF?*>DFGC4BDDBGFEGGGED@HAA>F>EECA;>5 AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2193:2247 0 chrU 1882319 1 50M * 0 0 TCAGATGAATTGATTATACGAATTTTTTCATTTATTGTTTTGTGTAATCT BCCFFFFFHHHHGIJJJJJJBHHJJJJJJGIJGGIJIHIJJFGGFGIIIJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2485:2101 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2300:2101 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2444:2101 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2423:2102 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2321:2108 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2276:2110 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2256:2110 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2369:2111 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2409:2114 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2452:2119 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2346:2120 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2434:2121 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2485:2124 4 * 0 0 * * 0 0 NNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2325:2126 4 * 0 0 * * 0 0 NNNNNNNANATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2302:2130 4 * 0 0 * * 0 0 NNNNNNAACATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2406:2132 4 * 0 0 * * 0 0 NNNNNGGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####22AFHF####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2465:2134 4 * 0 0 * * 0 0 NNNNNAGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####22AFHH####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2261:2135 4 * 0 0 * * 0 0 NNNNNGAGGCGATNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNN #####22AFHHFH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2441:2139 4 * 0 0 * * 0 0 NNNNNGTACTAAGNNNNNNNNNNNNNCTGNGNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2357:2145 4 * 0 0 * * 0 0 NACNNCGCACAGTTNNNNNNNNTCGATCTGCANNNNNNNNNNNNNNNNNN #1=##2=BFHHHHJ########21?CGHIJJH################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2279:2146 4 * 0 0 * * 0 0 NTTNNCAGATTGCTNNNNNNNAATATCCCGCCNNNNNNNNNNNNNNNNNN #1=##2=BFHHHHJ#######24AFHIJJIJJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2427:2148 4 * 0 0 * * 0 0 NCANNGTTACTGGTNNNNNTGAACCCGAGAAANNNNNNNNNNNNNNNNNN #1=##22BFHHHHG#####33AGIJJJJJJIJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2473:2149 4 * 0 0 * * 0 0 NTTNNAACATCTCAGNNNNTTGGCAATTATTTNNNNNNNNNNNNNNNNNN #1:##22ACFFDB@############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2261:2159 4 * 0 0 * * 0 0 NAGNNTGAGGTTGCCTAAAATCGGCCATATTTAGATNNNANNNNNNNNNN #1=##22BFHHHHJJJIJFHHGHFGHGHGIJJJJHJ############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2493:2160 4 * 0 0 * * 0 0 NGANNAAATTGGGGAGTTATGTGTTGTATTTAGTACNNNTNNNNNNNNNN #1=##2=BFHHHHJCGGHHIIHHIJJIDIIJGIGII############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2398:2164 4 * 0 0 * * 0 0 NATNNTGTGTACAACCATTTATAAGAGATGTCGAGTTGGAATNNNNNNNT #1=##2=ADFHHHJJJJJJJJJJJJHJIJJHHIFHGIJJGHI######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2462:2169 16 chr3L 20291895 44 50M * 0 0 ANTANNGCCACTCACATAAAGCCGCGTCACGCTTTCCGGATCGATGCGGT #######?7)EAC@@=;IHHDDDCHBGFC:*A9BDCDEFBBHB>HDHEEF*?C*?CB################ YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2487:2195 0 chr3R 14410458 44 47M3S * 0 0 ATGATCGTGTGTCTCTCCCGCGTTCTCTTCTCTCTCTCTCTTTTTCCCCC CCCFFFFFGHHHHJIJIIJJJIGIADAFGGGHGB*GHDFBBCGHHBCHEIGHFFC<@GHHDFFFFFD@<@ AS:i:100 XS:i:93 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2471:2219 16 chr2R 5838633 40 50M * 0 0 GAGCAGACGAATCTGGAGGTTTGTCAAATAGCTGAAGAACTCCCCAATGA CECGGJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2357:2221 16 chr3L 890599 44 50M * 0 0 TCTGAACAACCTTAACAAGGGATCGCAAAGCAAGGGCAAAGACGATTTTG IJIHGGGGBJIIHIGGIJJJJIGJJIJJJIJJJJJIJHGHHHFFFFFCCC AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:39G10 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2421:2221 16 chr3R 17556566 41 12S38M * 0 0 AACTGTGAAGCTAGCTTTCAAAAGAATATGAAAAAAAAATTATTAATCGA HFJIJJJJJJJJJJJJJJJJJJJIJJIJJJJJJJJJJHHHHHFFFFDCCC AS:i:76 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:38 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2298:2226 0 chr2RHet 2407072 0 25M25S * 0 0 TGGAAATAGCTAAGCCAGCAAAGCTAGCTTACTTACTTGTCTATTGTCTA BCCFFFFFFHHHHJJJJJJJJIJJJJJJJJJJJJJJJJIIJIJJJJIIII AS:i:50 XS:i:50 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2441:2228 16 chrU 6052411 0 33M17S * 0 0 AGCAAGAGCTAGGCACCCTCAGACAGGGAAGCTAGCTTAGTGCTGGTGGA JJIHGIGIGGGHF?1IHG@GHCIEJJJJJIIGIJJIGHHHHHDFFFF@CB AS:i:66 XS:i:66 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:33 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2328:2232 0 chrUextra 11747817 1 50M * 0 0 CAAACATACAAATTAATTACTTCAGAATCCGAAAGAAACCAAAATTTGTA CCCFFFFFHHHHHJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJII AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2393:2234 16 chr2L 21201631 44 50M * 0 0 GGGAACTATTTCAACATTATTGTACGCAAGCAACCGAACAATTTGGAGGA ###################################AEA+22+=B24=1:: AS:i:88 XN:i:0 XM:i:3 XO:i:0 XG:i:0 NM:i:3 MD:Z:24A8A0T15 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2498:2239 16 chr3R 8100007 44 50M * 0 0 TTCAGATGCAGCTTTAGCTCCAGCTTTGGCCAGCTCCACACTCAGCCCCC IGFJJJIJJJJIIGJJIGCJJJIGFJIIGJIIGJIIHHHHHFFFFFFCC@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2275:2247 16 chr3R 155324 44 50M * 0 0 CAACAACTTTTTTTCACTCTCACTTATAACAGGCTGCACATTATTCCATT GEGHD8IJJIIIGFC:HBHGHHJIJIGIHIIIJIIJIFHHHHFFFFFCC@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2450:2247 16 chr3R 11484997 44 50M * 0 0 GGGGCAGCAAGTTTAAGTGCGGCTTAATGTGGTCTTGAATAAAATAAAAT IHGIGGDGFHGBIJIGGGGIIIIJJIGGIJJIGIJIIHHHGHFFFFFC@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2373:2248 16 chr2L 17034163 37 26M2I22M * 0 0 CTCATCTTCCGCTCTTAGTTTTTGCGTTTTTTTTTTTTTTTTTTGTTCAA ##################BDB;3'''6DHJJJJJJJIHHHHHFFFFFCCC AS:i:81 XS:i:44 XN:i:0 XM:i:1 XO:i:1 XG:i:2 NM:i:3 MD:Z:7A40 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2477:2250 0 chr3R 27835919 44 50M * 0 0 CAATTCTTAACTATCCGTGTTCAAGCCGAGAAACTCACAAAAAAGTAATC CCCFFFFFHHHHHJJIIGGHGIJJJJJJIJJJJJJJIIJJJIJJIFFGHG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2548:2105 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2511:2109 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2708:2117 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2534:2117 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2636:2122 4 * 0 0 * * 0 0 NNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2726:2124 4 * 0 0 * * 0 0 NNNNNNNNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2591:2127 4 * 0 0 * * 0 0 NNNNNNNTNAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2658:2128 4 * 0 0 * * 0 0 NNNNNNNGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2749:2130 4 * 0 0 * * 0 0 NNNNNNGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2563:2135 4 * 0 0 * * 0 0 NNNNNTTAGCCTTNNNNNNNNNNNNNNANNNNNNNNNNNNNNNNNNNNNN #####22ADFHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2679:2138 4 * 0 0 * * 0 0 NNNNNGTTGTACGNNNNNNNNNNNNNCACNNNNNNNNNNNNNNNNNNNNN #####22AFHHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2716:2145 4 * 0 0 * * 0 0 NTGNNAATTAGCCANNNNNNNNGGCGCGCTATNNNNNNNNNNNNNNNNNN #1B##2=DHHHHHJ########24?FHJIJJI################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2593:2147 4 * 0 0 * * 0 0 NTCNNGTGCAACTANNNNNNATCCGTTTGAATNNNNNNNNNNNNNNNNNN #11##2=ADFHFFG######22AFH:CFCC>G################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2741:2149 4 * 0 0 * * 0 0 NCTNNCAACAACAAANNNNAGGAGCTAGTATANNNNNNNNNNNNNNNNNN #4=##2=BFHHFHJI####22CFGIIJJHIJG################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2617:2151 4 * 0 0 * * 0 0 NCTNNCTAGTAGTAGGNNNGCTCCAGTCTTGTTNNNNNNNNNNNNNNNNN #1=##2=BFFHHHIJJ###3D:AAADD@@@ AS:i:88 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2635:2175 16 chrUextra 24133103 1 50M * 0 0 GAACCACTTAACTCGGGCACCCATGAGGTAGAGAAAGTCGCATTTGGAAT GHDIFDJIHHDH>IJIIFEIIJJJJJJJJJJIJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2670:2177 16 chr2L 14340409 44 50M * 0 0 ATGAAAATCCCTTTGAGTGTCAAATAGCTCGACTTTTATTCTGTGGCAAT EHGIHCGJJJJJJJJIGGEHEJIIGIIIGIHHJIIJJHGGFHFFFFFC@C AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2558:2180 0 chrUextra 19361896 1 50M * 0 0 CCTTTTCCGCGTCGGCACTCGGAATAAATTTTATTTGTGGTTTGGATTTG @CCFFDDFHGHDFBGHGBDHGG??BDBHCIGI9FGBF)=F=FGEH9DHFC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2721:2182 16 chr3R 10171531 44 50M * 0 0 TGCTTTATGAATCATAAAGTTAGCAAGGTAAGTGTATATTATGTACTCGT JJJJJJJJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJHHHHHFDDFFCC@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2746:2183 0 chr3L 2221760 9 27M23S * 0 0 TGGCTGCCCTGCGAAACGCGGGAAGCTACCTTGATAAACTAATTCAAAAA C@CFFFFFHHHHGIJJJIJIJJIGGGHEIIGIJGIIJIGEFHHHHFFFFF AS:i:54 XS:i:46 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:27 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2609:2185 16 chr2L 22310442 31 50M * 0 0 CATTTGTATGTGCACCCTTTGTATACTATTTTTATGTATTCGTGTTGTCG IHJJIIJJJJIHG?JJJJJJJIHF?JIGJJJJIJJJJHHHHHFFFFFCCC AS:i:100 XS:i:91 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2571:2195 16 chr3RHet 2012048 1 50M * 0 0 TGTAAAAGCAATGACACAGAATTGCTCCATTGATAAGGTAAAACTTATCA IIGJJJJIEHIFGEGGIIGJIJJJIIJJJJJJJJJJJHHHHHDFFFF@C@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2666:2195 4 * 0 0 * * 0 0 TAGCAGCGTAACTCTATCCTTCTCTGGAAAATGGGCAAAGTGCTACAAAG ++:++2AD2A2C:E:22,3,,3A+2++A9E91:*)):DH3::09B##### YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2543:2204 16 chr3L 6518405 42 50M * 0 0 GCTGTTCGCACTAGTTGGTAGTGTGTTCTTTTTGCTGATTATTGTGCGAG CCIHGEGGHGGHGHBHIIJJJIHF>IJJIIJIJIIIGFHBHGFDDDD@?; AS:i:85 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:21C21T6 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2529:2207 0 chrX 14888859 44 50M * 0 0 TAGCTCGTCTTGCGAAAGAGGAGTAGCGTGTATTGCTAATTTTTGTAACA @@?DFFDDFHHFFGH>GEGIDCH?DD*??D?F?G9?BFH4?DHH:CIIIIHCJIGJIIJJJJJIHGGGHGHDDDDFBB@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2579:2213 16 chr3L 12194651 41 39M11S * 0 0 CTACAATTAGCTGGTTTAGTGGTAACACGTACGCAAGCTAACTCAAATCT DHDGIJIIHGGGIJGIJIGEIIGGFC2GFFCGDGIIGDHHHHFFFFFCCC AS:i:78 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2674:2215 0 chrX 21601714 1 50M * 0 0 CACAAAATTGTCACAGCAATGCATGCGCCAGTATCGGGTAGCGAAGTGGA CC@FFFFFHHGHHJJJIJIJJIIJIGJJJIJIGIIJJI0???@?AF5CH; AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2715:2222 0 chr2R 17295185 28 17S33M * 0 0 TCTGCACAACATAAGCTAGCTTAGATCCATATCCCTATGCCCCGCACATT =?B??DADDHB?D?CEF9F@:AF<<,2AHCAH@D@>IDHBDFD43DB@@@ AS:i:62 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2881:2102 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2970:2103 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2957:2116 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2828:2119 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2779:2122 4 * 0 0 * * 0 0 NNNNNNNNNCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2806:2122 4 * 0 0 * * 0 0 NNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2934:2125 4 * 0 0 * * 0 0 NNNNNNNNNATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2870:2125 4 * 0 0 * * 0 0 NNNNNNNNNTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2995:2128 4 * 0 0 * * 0 0 NNNNNNNAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:2766:2138 4 * 0 0 * * 0 0 NNNNNTTAACTTANNNNNNNNNNNNNATTNNNNNNNNNNNNNNNNNNNNN #####222?G>BFFDF@C9*CC?188ED?3E?DC@818HF?DAD?D@;@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2894:2188 0 chr3R 3391741 9 28M22S * 0 0 AATTTTTGTGCTGTATTGTCGTCAAGCTAGCTTGCAAACTTTGATTAGTG @CCFFFF?FHHHHGGJIJJJIIIDHIIJGICGIGDGIIIIJIIFGGEGDE AS:i:56 XS:i:44 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2861:2189 0 chr2L 1131985 2 25M25S * 0 0 TGTTTCCGCCTTTCCGCATCAAGCTAGCTTTTGCACAATTTTTAAATTTT CCCFFFFFGHHHHJJJIJJJJEIJJJJJJJJJJJJJJJJJJJJIJJJJJJ AS:i:50 XS:i:46 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2771:2191 0 chr2L 21486890 1 50M * 0 0 ATAAATGCGACGCCCAAAAGTTAGCGCCATTCATCAAGAAGTACTTAAAA @C@BFDBDHFHHHIIEEEGGFFBGIGHIGIIGGFGIFIB@F.=FFHJIIJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2818:2191 16 chr2L 3765494 24 19S31M * 0 0 AATAATTGTATTCAAAGCTAGCTTAGCTATAGCCCATTCCAAGAATGAAA JJJJJJIJIJJJJJJJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:62 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2752:2200 16 chr2L 18459224 42 7S43M * 0 0 TCAAGCTAGCTTCAAAAGCGGAAAGTATGATAGCTGATATAGGATTAGAG IIGFJJJIGJIJIJIGIGEHEIHDDJDJIJJJIIJJHFFHGDFDFFFCC@ AS:i:86 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2974:2205 0 chr3L 13957951 44 50M * 0 0 CATATTTAAATCAAAATGTATGTAAATCTATATTAAAGGCATTAACAATG CCCFFFFFHHHHHJJJJJJHJJJJJJJJJJJIJJJJJIJIIJJJJJJJJI AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2808:2210 0 chr2L 11336535 42 46M4S * 0 0 CTTTTTCGGGCAGCCAAATCGATTATTCAGTTCAACCTGCAAACTTTGGA @CCFFFFDHDHFHIIHGGGIIHJEJJIJCGIIGGIGIJJJJIJEBFHCEH AS:i:84 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:42G3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:2924:2212 0 chr2L 21547395 1 50M * 0 0 GGATTTAACACCTCGAGTACGTCTGCTCTCCAACGACTGGGGGGCACGAG @@;AD>>BBFD?HGIEEEFHG>CFCH4B:?FFEFFHGEG:?FGBHCEHHG@A9EC9CFEGAGC:D>?DFH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3249:2144 4 * 0 0 * * 0 0 NNNNNATGCGAAAANNNNNNNNNAAATAAATGNNNNNNNNNNNNNNNNNN #####22AFHHHHJ#########11?CHIIJJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3079:2148 4 * 0 0 * * 0 0 NATNNTTGAATTTCNNNNNNCAGTGTAATAATNNNNNNNNNNNNNNNNNN #1=##22ADFHHGI######32<2:CDDHGIJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3122:2148 4 * 0 0 * * 0 0 NTGNNAGGAAAAACNNNNNNTACGTTTATGAANNNNNNNNNNNNNNNNNN #1=##2=BBHHHHH######22GHG@2@47;AHGA@IHCHHIJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3269:2153 4 * 0 0 * * 0 0 NTTNNGGGCCAAAATGNNGCTGTTCAGACCACAANNNNNNNNNNNNNNNN #1=##22BFHHHHJJI##4DDAD=?? AS:i:60 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3329:2172 16 chr2L 13429607 44 50M * 0 0 TTGCNNATTCAACCGCTGGCTCATTAGTTCGATTTTAAGCCCAAAAATAA F@5.##IIHIGGJJIJJJJJJIJJJIIJJJIJJJJJJHHHHHFFFFFCCC AS:i:94 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:4C0A44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3362:2177 16 chr2R 11027916 44 50M * 0 0 TACCCCCCAAAATCCCCGGACGTTCTCTATATCTAAACATAAATACCCTG 95DJJJJJIJHEFJJIJJIHJJJJIGJJJJJHIJJJJHHHHHEDAFFB@B AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3386:2179 16 chrX 5234849 44 50M * 0 0 AGCGGCGGCTTAAGCCGTTACTTTCAGACTAAGTGGTGGGTACGAATTCC ##AAF@809?9?6@C;EIGFBGCFEC2C:@A??C@CHF@EEADGBFHEFBBAD9F?FBHIHAF=HFBDDDDB?? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3419:2215 0 chr3RHet 2333422 39 50M * 0 0 ATATTAGAAAGTTTTTTGCCAATTTCGTAGCAAATTTTTGAAAATTCGCG CCCFFFFFHHHHHIJJJJJJJJJJJJIHIJJIIGIJJJJIJJJJJJIJJJ AS:i:100 XS:i:48 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3267:2218 16 chrU 5523 1 50M * 0 0 AATTAACGGTTCCGTATACACCACAACAAAACGGCGTCGCGGAACGCGCT EDDB@=DDDCAFFFFECCA=HECGHFJJIHAJJIIIIHHHHHFDFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3466:2221 0 chr3LHet 1339603 2 27M23S * 0 0 AACGCAACTATACCGTAGGCCGAAGCTAGCTTAAATAAAGCACAACATAG CCCFFFFFHHHHHJJHIJJIJJIJJJIJJJIJJJJIJJIIEIIIIIGIJI AS:i:47 XS:i:46 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:5T21 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3398:2221 16 chr2L 4857084 24 31M19S * 0 0 TCTGCTGAAAGCAAAAAGGCGTATGAAAGCTAGCTTCTAACAAAATTCTT IJJJIJJJJJJIJJJJJJJJJJJIJJJJJIJJJIIIJHHHHHFFFFFCCC AS:i:62 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:31 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3311:2222 16 chrX 13376774 16 30M20S * 0 0 TCGCTCCAATTGGATTTCCGTTATGAAGCTACCTTAAGATTTTAAAATCG BJJIIJIJJJJIJJJJIJJJIJJJJJJHIHFJJJJJJHHHHHFFFFFCCC AS:i:60 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3492:2224 0 chrX 19819528 1 50M * 0 0 AATAATACAACTGTTCAAAAAATACTTGTTATAGTTAAGATTTTTAAACT B@@AADDDAF>D>:,2,DHGFF4EBEG?DHIIGECHIJGCIJG AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3376:2225 16 chr3R 21584192 44 50M * 0 0 CGCTTTAATTTTAAGTTATCAGCTCAAGCTAAGTACTTTACTTTGTTCTA :BBF@D@GGFJGIHFHFF?EH>FAF@CHBGAC2BHFDDFD@B? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3447:2232 16 chr3R 17017883 44 50M * 0 0 GTTGTTTCTCCCAAGCTGTTTAATTATAATCTCGGCCCGCAACAACATAA EFHFHHFIHJJJIJJIJJJJJJJJIJIHBIIGJJJJJHHHHHFFDFFCCB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3372:2237 16 chr3L 1399135 44 50M * 0 0 TATCAAGCAATCAGTTTCGGATAGCGGTTATTGCATTATGTTTCTTGTTG HIGFJIJJIGIGIGGJJJJIJJIJJIIJIGJJJJIIJHHHHHFFFFF@CC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3287:2238 16 chr2L 10615796 44 50M * 0 0 CGGAGCCGAAGGTGGTGCGGCGTCTCTGGGCGGTGCTCCAGTGGTGCGGT #####EDBHAAE>EBHFA6FCFAHHHAHBEF=GHEFEAFFFHFDDDD@@; AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3321:2242 0 chr3L 21058230 44 50M * 0 0 GTATTATATAATAACAATCTAAATTATCGTACGATGAATTTTCACAATTT C@BFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3668:2103 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3588:2106 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3687:2108 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3632:2114 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3650:2124 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3550:2126 4 * 0 0 * * 0 0 NNNNNNNNNGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3704:2128 4 * 0 0 * * 0 0 NNNNNNNTNTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3530:2128 4 * 0 0 * * 0 0 NNNNNNNCTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3569:2130 4 * 0 0 * * 0 0 NNNNNNTTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3671:2133 4 * 0 0 * * 0 0 NNNNNTAAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####22AFHH####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3520:2141 4 * 0 0 * * 0 0 NNNNNTTATTAAGNNNNNNNNNNNNNAAGNTNNNNNNNNNNNNNNNNNNN #####42AFHHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3612:2141 4 * 0 0 * * 0 0 NNNNNTTGTGCAANNNNNNNNNNNNNTTANTNNNNNNNNNNNNNNNNNNN #####22ACFHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3641:2142 4 * 0 0 * * 0 0 NNNNNATTATTCGNNNNNNNNNNNCNTTCNCNNNNNNNNNNNNNNNNNNN #####22AFHHHF##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3588:2147 4 * 0 0 * * 0 0 NATNNCGTTACGCANNNNNNNATTCTAGGGTCNNNNNNNNNNNNNNNNNN #1=##2=BFHHHHJ#######21CFHIIJJ?F################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3658:2147 4 * 0 0 * * 0 0 NAANNAAAAAAACCNNNNNNNTTTGCGATTTANNNNNNNNNNNNNNNNNN #1:##2=BF?FAC##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3537:2148 4 * 0 0 * * 0 0 NATNNGCTTTTATCNNNNNNAGAATCATTTTTNNNNNNNNNNNNNNNNNN #11##22ACFABCH######+22GIJGIGHIIJJJGGEHIDHJGGGGBGHG######## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3605:2167 16 chrX 21598153 1 8S42M * 0 0 GNNNNNNNTCTTATTCCCAAATAATATAAAAGTGCGTTTCCAATGGGAGC ########IJJJIIGJIJJJJJJJJJJJJJJJIJJJJHGHHHFFFFFCCC AS:i:84 XS:i:84 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:42 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3725:2170 0 chr2L 3376467 22 15S6M1I28M * 0 0 ACATTATTTTAAGCTAGCTTAGGGACTCACCGCCTGTCACCAGANNATNG ?=8BDF?A?AHH?+CGB:I:<<<<+33AF?GFG?GHADGHHGHGHFHGGGHECH AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3694:2199 0 chrX 21049614 40 50M * 0 0 GAAATATTTTTTTTTTTTTTGGTCGCTATAGCATGTTGGCGTGGCATAAG @CBDDFFFHHHFHJIIJIIFE>C########################### AS:i:100 XS:i:44 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3602:2201 16 chr3R 13422030 44 50M * 0 0 TTTACAAATCAATTATAAACGCAGAACGAAGTGTTATCAACCTTGAATCG GFAGGHGB>HGIFIGIIIHIIIHF@IGIGGHGFFBEFBCCFDDFFFD@@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3718:2202 16 chr3L 24316078 44 50M * 0 0 GAGCATTCAATAAACCTAGTCCAAAAGAACTCGCTTGAAATAGTCCGCAG IJIIJJIHJJJIHFJJJJJHJJJJJJIIHJJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3615:2203 16 chr2R 10935007 36 36M14S * 0 0 GCCTGTATCTCAATCTTCTTTCTACAAGTTGAAGCTAGCTTTGAGTGCAT ECGIHGIGG@CHGGIIGIHGIHFEIJIJIIJIGJJIIGHHHHFEFFF@@@ AS:i:72 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:36 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3655:2211 0 chr4 938252 42 43M7S * 0 0 ACACTGCTACAGGAGCAACAGAACGGGTGGTCTGCGAGAAGGTAGGTTTT CCCFFFFFHHHHHJJIIJIJJJJJJJJEGI@GEGHI@GFHII.BFF8=EH AS:i:86 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:43 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3688:2213 0 chr3L 15802035 44 50M * 0 0 AAACAAATCACAATATTAAAACTAGTTAGGATCATAAATAGTTTTTGCTA @B@DDFDFFFHGHIBHIGBFGGIHHFHGIIIJJJJIJJJJJFHGGIJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3509:2224 0 chr2L 18529910 44 50M * 0 0 TCACTTCCTGGACGGTTCCATGGTGTATGGCGAGACCACTTGTCTATCAA ??:ADE:ADD??AFH1>BBEFHHDGHHAFECHGHHCIIIIIJHDIJIGEHGDHHAAHDBBA4+8< AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:39T10 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3930:2101 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3802:2103 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3916:2106 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3972:2109 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3948:2112 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3768:2116 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3789:2117 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3846:2117 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3966:2120 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3899:2120 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3827:2126 4 * 0 0 * * 0 0 NNNNNNNNNCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3941:2129 4 * 0 0 * * 0 0 NNNNNNNGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3920:2138 4 * 0 0 * * 0 0 NNNNNTTTGTATANNNNNNNNNNNNNGCNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3777:2139 4 * 0 0 * * 0 0 NNNNNTGTCGTTANNNNNNNNNNNNNGTANNNNNNNNNNNNNNNNNNNNN #####22=CFFHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3869:2142 4 * 0 0 * * 0 0 NNNNNAATAATAANNNNNNNNNNNTNATTNANNNNNNNNNNNNNNNNNNN #####22AFFHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3795:2144 4 * 0 0 * * 0 0 NNNNNAGGTAGCTTNNNNNNNNNCGNAAGTAANNNNNNNNNNNNNNNNNN #####22=DFHHFI#################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3902:2147 4 * 0 0 * * 0 0 NAGNNTTGTCTTCGNNNNNNNNCAATACATTANNNNNNNNNNNNNNNNNN #1B##2=BFHHHHJ########22@GHIJIII################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3812:2148 4 * 0 0 * * 0 0 NAGNNTATTTGCATNNNNNNAATGTAGGTAAANNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:3829:2148 4 * 0 0 * * 0 0 NTANNGGCGCTGGCNNNNNNGTTGCTGCTGCTNNNNNNNNNNNNNNNNNN #11##22ADHH:??######11:CFGFDAB;@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3988:2204 16 chr2L 16874857 44 50M * 0 0 ATAAACTGTAGGCTAACTGCATCTCAAGGTTCATTTGTTTACCATAAAAC JIIIIJJJJJJJIIIGJIJJIIJJJJJJJJJIJJJJIHHHHHFFFFFBBB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3927:2206 0 chrX 12478359 44 50M * 0 0 TTCCTCTTTTATTAACAAAAAATGTTTTAAGATTAAAATCAAAAGAGAAT B@@FFFFFHHHHHHJJIIJJIIIJIIJJJJJIJIJJJJIGJJJJIIIGJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3968:2211 0 chr3R 18762349 28 16S34M * 0 0 CGAATTATACAAAGCTACCTTGTGTTGTGTAAGCTGCATTTAAAAACACG ?@;;D?D>CDFHFEFAGHHAG?C3C:C9AFEHG@GDGGDDGHIIIIG?HH AS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3939:2228 0 chr3L 15140991 12 29M21S * 0 0 ATTAAATGAAATCAAAGGATCAAAAAGCTAGCTTAACGGGAGCTACCACG @CCFFFFFGHFHGIIIGIIGIIJJJIGIIIJJIJIJJJJIEGBFHGGIJG AS:i:58 XS:i:42 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:29 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3986:2234 16 chrX 8793953 44 50M * 0 0 CTCATCGAGATTCTTGAAGCCGAAACTCAGCGTGGGCACAAAGACGGGAT IIGBCGIIIJJJIJJJIIJJJIGHFHFJJJIJJJJJIHGHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3907:2236 0 chr3R 27796583 44 50M * 0 0 ACAGAGGATCTAAAAAACACTTGCAGGTCGGTTAATTCATATGCGTTTAC BB@FDFFFHHHHHJJJJJJJJJJJJJJFHHIHIJIJJIJJIJJIJJJJIJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:3794:2239 0 chr2R 19068978 44 50M * 0 0 ATTTACACGTGTTTATGGCAGGTCATAAATGGTTCGACACCTAAAGGAAT BCCFFFFFHHHHHJJJJJJJJJJJHHHHHFEDFFCCC AS:i:97 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:4T45 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4234:2174 16 chr3R 25486320 9 28M22S * 0 0 TAATNCGCTATTCCATAACTTTAAAGCTACCTTTCATTAAAAAAGGAAAT HF?0#JIJJJJJJJIIHGJJJJJJIIHHCJJJIHJJJGHHHHFFFFFCCC AS:i:53 XS:i:44 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:4A23 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4115:2182 16 chrUextra 19166682 1 50M * 0 0 TCAAGCTAAGCGATAAGAACTATTTCAGGCAAATCGGACAACAACAAGAA GIHHGEEJIIIGGJIHHIFIIIHIJJJJIIJHGEHHGBHFHHFFFFF@@@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4149:2183 16 chrUextra 24311534 1 50M * 0 0 TCCAACTCTTAGAACCCCATCCTTGTCCAAAAATGGATTCAATGACAATA ?HGD9GHIHGGCDCJJIHHGJJJJJIIGJJJGGGGGJFHGHHFDDFFCC@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4221:2188 0 chr2L 15420394 28 18S32M * 0 0 TATTATTTAAATAAAGCTAGCTTATTTCCGTATTGAAGTTTCAGCTTTGC ?;?D7BDBAF>DFEAEG9IHAHG4FCIHDGGHHE?9?:29CC8FHEEGHFAABBGEFIHFBHDDDHDGIEGC@@BFHFGG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4114:2224 0 chr2L 8322007 44 50M * 0 0 AGGTTTTAGTTTTATTTAATCGTTATTTTCCTTGATTTCGTTTAATACGT BCCDDFFFHFHHHJJJJJJJJJJJIJJJJJIJJIHJJJJJIJIGJJJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4212:2226 16 chr3L 18251259 44 50M * 0 0 TTTCTGCACATTTTATGCCCCGATGGACAAGCCTTTTTTGATTAATTACG JIGIHHGCIIJJJJJIGJJJJJJIJJJJJJJJJJJJIHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4159:2230 16 chr2LHet 337321 40 50M * 0 0 AAACTATTTAACTATATATGTGATTTTCCCAATTTATATCAACAATAGCT IIGJJJJJIJJJIGIIGIJJJJJJJJJJJJJIJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:42 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4093:2231 0 chr2RHet 2213150 0 16S34M * 0 0 AGGCGCAGGGCAAGCTATCTTTACAGTTCCCCTATACATATATGGAAGGA CCCFFFFFHHDFHIGIIIGIIJIGEHFHGHHJHEGHGHGHIIGGIFHHJ@ AS:i:68 XS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4011:2232 16 chr3R 25650954 41 40M10S * 0 0 CAAATCCATATGCCCATTAATCTACATAGACGTCTAAGCTAGCTTTAGTT JIHHCIIJIJGJJJJJIJIIGIHEGIHJJJJIJIHJJHHHHHFFFFFCCC AS:i:80 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:40 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4031:2238 16 chr3R 17455932 44 50M * 0 0 TAATAAATATGCCCAATTGCAGACATGAAATCTCAATTCACTAATTAATA BJIHIJIGIJIJJJJJJIJIHIJJHGGJJJIIHIIJJHHHHHFEDFFC@B AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4055:2242 16 chr2R 9724723 28 18S32M * 0 0 CGAAAATCTTAGGAAGCTAGCTTGTTAAACAAACAATTTATTAGTTTCTT GHJJJJIJJJJJJJJIEHJJJJJIIJJJIJJHGJJIIHHHHHFFFFDCCC AS:i:64 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:32 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4186:2242 16 chr2R 17998069 44 50M * 0 0 TGGTGCCTGGTCACCGCCGGACGCTGCTGTCCGTTGGCCATCGCCAGTTG CCCHIGI AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:10T39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4316:2212 0 chr3R 8242782 28 16S34M * 0 0 GCATAGCAACTAAGCTAGCTTGATGCAAGTCAGAACAATGATCCCGACGC CCCFFFFFHHHHHJJJJJJJJJIJJJJJJHHIJJIJJJJIJJJJJJJJGJ AS:i:68 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4295:2212 0 chr3R 16540034 42 50M * 0 0 GAGGACTCAACAGGAACTGAATTCGCAAAATGGTGCAAGACAGCTGTTGT C@CFFFFFHHHHGJGIJJJIJJJJJJJJJJJIJGHIJJGEGGIIGIGHIG AS:i:85 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:20G17A11 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4499:2217 0 chrUextra 212123 1 50M * 0 0 ATGATTTATTTATGCGGATAATTTAAACGATCGACTGTTCAAGTAGATGG @@CDDFADFBF?HHIJJGJGHIIIIFGGIGHGIGJEGGCEDIGFEGGGG> AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4255:2220 16 chrX 14985619 44 50M * 0 0 ACATACGACGTAAAAGATACATCCAAAAACCACACCACTATGTTAAGTAC B;B?6@ABF?F????9?EDHDG?DEHFA+BCCA:HEEA:AFFDD>FDB:? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4361:2223 0 chr3L 20243589 44 50M * 0 0 CGAAAAGCAATTAACTTAAGACTGATAACCAAGATGCTTTTGGTAATAAC CCCFFFFFHHHHHJJJJJIJJJJJJJJJJJJJJHJJIIIJJJIFHIIJJC AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:20G29 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4451:2224 16 chr3L 6467862 44 50M * 0 0 CTTGGCCTTTGTTTTTTTATTTCAATTTTTTTTTGTTTAACACTTTCTGA ;;??=3HE@;<>GHCGFBB99*9GCF6HIGC3::B@82A@?@FFA<#11:B######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:4548:2173 0 chr2L 11113122 44 50M * 0 0 CCGTGACGTCACAGGCAGTGCGTCACAGTGGGTTCAGTTGGAACNNAAAG CCCFFFFFHHHHHJIIIJFHIIIJIJJJCGIJFHIHIHIJJIJJ##-7CF AS:i:94 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:44A0C4 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4631:2175 16 chr4 346227 0 20S30M * 0 0 ATTGTCTCGCTCGATGTGGTCAAGCTTGTGGAGCGGTTTTAACCCAGAAC GJIIIIHGIJJIJJJJJJJJJJJJJIJJJJJJJJJJJHHHHHFFFFFBBB AS:i:60 XS:i:60 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4664:2177 16 chrU 9059731 1 50M * 0 0 TGTCACCATGAATTTCACAGGGAGTGCATTGGCAATCATTTTAAAAAAAG HGJIGJJJJJJJJJJJHJJJJJJJIJJJJJJJIIGIJHGHHHFFFFFCC@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4698:2181 0 chr3L 21855570 41 39M11S * 0 0 AGTCCTTTTCCCTTTTTTTATGAAAATATAACCAAAGCTAGCTTTTGTCC CCCFFFFFHHHHHJJJJJJIJEFGHIIEGGIGGEHIIJEGGGBGIJGGEI AS:i:78 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4586:2187 0 chrX 17909495 42 42M8S * 0 0 GGAAACTTTTATCATTTACCAACATAATATGAAATATAAGCTAGCTTACT CCCFFFFFHHGHHJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJIJJJJJ AS:i:84 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:42 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4748:2190 0 chr3L 12702071 44 50M * 0 0 ATCTCCGGATCCGGAACTGGGTGCGGCCCCAATTGCCCCGCCCATCTCCG +?:ADF?D:1CA# AS:i:96 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:37T12 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4525:2193 0 chrUextra 11542983 1 50M * 0 0 ATTATATATATATTTAAATAACATCATTATGCTGAAATAAAGAAAATGTT CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJJIBG AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4643:2193 16 chr2L 13770739 44 50M * 0 0 TTTACGTCAATTATAAGATAAGTAGACTATATTTATTAAAACTTTATTTA IIHFGGJIIHGFCBCH>HCHHB@AGIHIBIDDHGGAF;AA3AFG,2C4GG? AS:i:87 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:22C15T11 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4618:2209 16 chr3R 4113649 44 50M * 0 0 ATTATTGCACTACTGATAACGAAATAACAACGTGATTGTACTCAGTTGTT JJJJJIIIIHIGJIJJGJIJJJJGHJJJIIJJJJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4550:2211 0 chr3R 13420860 44 50M * 0 0 TTCGTTGCTTATGTTTTTTAGAGTCTGTTTTTAGGAACCTGTGTGATAAA CCCFFFFFHHHHHJJJJJJIJGIHIJJIJJJJJJIIJJJJJHIHIIJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4703:2216 16 chr3L 4032857 28 32M18S * 0 0 CGATATTTTTCTGTTTCTCATGTGTCGAGGCTAGCTTTGAGCGTGGTTAT IJJJJIJJIIJIIJJIJIJJJJJJIJJJJJJJJIIJJHHHHHFFFFFCCC AS:i:64 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:32 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4525:2217 0 chr3L 9115149 22 21M29S * 0 0 GATTTGTGAAAAGTCAAAGCTAGCTTTCGATGACTTCTATTTTTCTGACT ?;BADDBDHFADH?GDEHDBBHGEEC?EH;AFHCDBG@BGFHHGJ>HHGHD?DD AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4683:2221 16 chr2L 18382714 42 3S47M * 0 0 CACGATTACAATCTAACGAAAGTTAAAATTAAATCATTTACCAGAATCTG HFJJIIIFJIIGJIGGIIJJJJJIJJJJJIJIIIJJJHHHHHFFFFDCCB AS:i:86 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:32T14 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4591:2224 16 chr4 1176650 35 50M * 0 0 AAGAAAATTTTAAAGAAAAGTTTCTGGCCGAGGTTGAGTGGATTGGGATT IGGJJJIJJIGJIHGJJIIIIIJIJJJJJJJJJJJJJHHHFHDDFFFCBB AS:i:100 XS:i:65 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4570:2227 16 chr2L 13421 44 50M * 0 0 TTCAATTCTCGCGAGGCCGTGGTTCAGAGACTATTTCCGTTACCTTTTTT FFFFHHHHHIJJIGJIIIJIJJJJIJJIIHJIJJIHJHHHFDFFFFFCCB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4511:2230 16 chr2L 12772384 39 1S49M * 0 0 TGTGTGTGTGCGAGTGTGAGTTTTGTTTGTTCGTGTGGCCCAACACTTAC G@;8B./IG@1BGDHBD9D?FE9F?@)32A2:A3:AFDAAA?D??; AS:i:94 XS:i:42 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:29A19 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4609:2236 0 chrX 1872562 44 50M * 0 0 ACGATTATGGGACGGATGGTTAGGGTAATATCTCATTATTTGGCCAATTG CCCDFFFFHHHHHIJBGGIDGGGHI:CGGIIDHGEGIGIIGGGIIGHFCIJJJHGGIIJJIHEHEGGHHHF?DDFFF@@@ AS:i:88 XS:i:88 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:44 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4830:2176 16 chr2L 16279955 44 48M2S * 0 0 CTCAACATCAACTTCAAGGAATATACTTCTAGATTCTTGTAGATTTTGGT 39B?1DCDDB?1**?FDBB:+= AS:i:90 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:28T19 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4925:2189 16 chr3R 23140623 44 3S47M * 0 0 TCTAATATTAAAAGCAAACTATTGATAGAAAATTATCTATTGAAACTCGT JIIJJJJIHJJJJIJJJIJJJJJJJIJIJJJJJJJJJHHHHHDB2FFCBB AS:i:94 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:47 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4839:2190 16 chr3R 20400429 39 3S47M * 0 0 GCTAGCTTCGAAGACCTTGAATAGCTTTTTTTCTTCCTTTTTTTTCGTGG EEEFFFHEHDIIHGJIIJJJJJJIJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:94 XS:i:42 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:47 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4879:2193 0 chr3L 22063249 44 50M * 0 0 GTCTCCTTCATTAACAGTCGCATAAAATATTCCGGTAGAGGATGTGAAAG CCCFFFFFHHHHHJJDGHIJJJJJJJJJJJJJJJJCFHGHJHIJHIIJJI AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:15T34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4968:2193 16 chrU 3570269 16 20S30M * 0 0 GGCCAAGACATATTAAAGCTAGCTTACGTTAACAACGAAGATGATTCTGG HGHFIJIIJJJJJJJJJJJJJJJJJHJJJJJJJJIJJHHHHHFFFFFCCC AS:i:60 XS:i:40 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:30 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4902:2196 0 chr3R 8401294 44 50M * 0 0 AGCCTGTTGGCTTGTTTTATGCAACTCCATTTTCAACTGAGGTAACGATA CCCFFFFFHHHHHJHIJJGJIJJJJGIIGIJJJFGIJJJHIJ?DGIJIGI AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4816:2198 0 chr3R 3978987 9 23S27M * 0 0 AGTTTACATTGTTAGGCAAAGCTAGCTTATAGTACAATCCGCAGGCGTTG B<:=D:=BFH<@HGHAHHG:?FHGD?8IIIIHH@FBCHGHGBJFHHDDBDDDA@B@ AS:i:72 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:36 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4850:2216 0 chr3L 4977118 44 50M * 0 0 CGCATATACCCTGCCAACACACACTTGACAGGTATAAAACATTTTGCAGC CCCFFFFFHHHHGJJJIIJJJJGJIJJJJIJJ?FIIJJJJJIJJJIJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4956:2217 16 chr2L 12017787 44 50M * 0 0 GCCCAATGCCTGTGCAATGGGATCGAACAGGTTCCAGGCAGTCAATATCG IJJJJJIJJIIJIJJJJJJJJJIJJJIJJJJJIJJJJHHHHHFFFFFBCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4818:2223 0 chr2L 4560907 12 29M21S * 0 0 GGAGAGAACACAACTATTTCCAACAAGCTAGCTTTAGAGCTCAGCCGCAA 1+1+4ADD?+++2+2AFC:CAE<<2AE9FCEFCG?8C0?##### AS:i:95 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:10C39 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:4865:2247 16 chr2L 14678386 44 50M * 0 0 GGTGACTGACTTGGTGGAGCAGGGCTTATCGGGGAATTGGGTGGTTCGAT IIJIGIIHEIIGIIGJIGIIJJJIIJJJIJJJJJJJIHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5136:2104 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5044:2107 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5179:2108 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5082:2110 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5208:2111 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5061:2118 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5146:2123 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5029:2126 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5123:2130 4 * 0 0 * * 0 0 NNNNNNNGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5178:2130 4 * 0 0 * * 0 0 NNNNNNNTGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5158:2131 4 * 0 0 * * 0 0 NNNNNNGGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5243:2139 4 * 0 0 * * 0 0 NNNNNAAGAGTTCNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNN #####22ADFFHF##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5082:2139 4 * 0 0 * * 0 0 NNNNNTTTGCGCANNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNN #####22BFHHHH##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5037:2142 4 * 0 0 * * 0 0 NNNNNATTAGATGNNNNNNNNNNNNNTTCNGNNNNNNNNNNNNNNNNNNN #####22=C;CDF##################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5188:2145 4 * 0 0 * * 0 0 NNNNNGGTTCCTTTNNNNNNNNNGCNATAGTTNNNNNNNNNNNNNNNNNN #####22=DFHGHJ#################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5164:2152 4 * 0 0 * * 0 0 NAGNNTTTTCCAAAANNNNACTCATTCCGCACNNNNNNNNNNNNNNNNNN #1B##2=DHHHHHJI####34CGIJJJJJJIJ################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5017:2156 4 * 0 0 * * 0 0 NACNNCATCCGCGCACANGTGCATGGACTCGGCANNNNNNNNNNNNNNNN #1=##4=BHHHHHJJJJ#41?FEIIJGJJJJJJG################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5047:2158 4 * 0 0 * * 0 0 NCGNNCCAAATAGGCCCNTTTATCAGTATGAAAGGNNNNANNNNNNNNNN #1:##22ACDFDDH<<<#33A8ACHAH>GEHBGEG############### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5121:2160 4 * 0 0 * * 0 0 NAGNNTAATGTTGTTCANTTGTATTTGAAAAGATAGNNNGNNNNNNNNNN #1=##2=BFHHHHJJJJ#3AGHHHIJJHIJJJHIIJ############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5060:2162 4 * 0 0 * * 0 0 NAANNAGTTCTGACGTGCAAATCGATTGTCAGAATTNNNTNNNNNNNNNN #1=##2=AFHHHHIJHHIIIIJJJGIJIGIIIJIII############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5229:2163 4 * 0 0 * * 0 0 NAANNTTAAATAGAATAATATATATGAAAAAAAATTANNAANNNNNNNNN #1=##2=BFHHHHJJJJJJJJJJJJJJJJJJJJJJJJ############# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5101:2167 4 * 0 0 * * 0 0 GACTNTGCTCGCTGTACTATGTCGATGTTGCTTTTCGATGCGNNNNNNNA CCCF#2ADHHHHHJJJJJJJJIJJHIJJJJJJJJJIJIJJJJ######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5031:2173 16 chr3R 12270387 42 50M * 0 0 GNAANNAGGACAAATACCGCGTGGATGTTTGGCTGTAATGGACAAGTCTT ######GIHCIGGF@:GGEGEEEBBJGJJJJIJJIGEF?HFBFFFDDCCB AS:i:84 XN:i:0 XM:i:4 XO:i:0 XG:i:0 NM:i:4 MD:Z:1G2G0C15A28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5203:2180 0 chr2RHet 1958835 44 50M * 0 0 AGATGGAATTTAACTGAAAAAGGTGGTAGTAATTTTGAGAAACTGATTGT CCCFFFFFHHHHHJJJIJJJJJJCFH?FHFGIJJJJJIIJIJJJJHHIJG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5152:2181 0 chr2R 8773384 44 50M * 0 0 GCATTCGCTGCTGCTGTTATTGTATCAATCAATAGTTGCAACGATTATTT CCCFFFFFHHHHHIJJIJJJJJGIJJJJJJJJIJJIIIJIJJJGIIJJJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5008:2182 16 chr2L 18586517 44 50M * 0 0 AATCCAAAAGAATTTGTATAATTAAAAAAATTAGTTTCCTGCCTTGAAGT CB8GCDD@B?BFBFDB?DFC+FCBDAEDD?D??? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5183:2183 0 chr2R 18431856 44 50M * 0 0 CGAAAGGCGTGGCAGTTGATAACCATAACAACAGACAGTGGGGTGAAAAC CC@FFFFFHHHHHJJGIJJJJJJJJIIJEIJJJJJJEIDGHJJ@HGHIII AS:i:92 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:23T26 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5051:2185 0 chr3R 15214944 44 50M * 0 0 AGCTATGATGCAATTACTGCATTACTTCTGGACACTAAATACAATGGCAA C@CFFFFFHHHHHIJJJJIIIJJJIJJIJGGHGEGGIJ*?DFHHGHGIIJ AS:i:96 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:38T11 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5070:2188 0 chr2R 17640188 44 24M1D26M * 0 0 ACTGCGCGTAATTAAAATCTTTAATTTTTTTTGCACAGAAAACAAAACTT CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJIIIJJIGIJHHEHH AS:i:92 XN:i:0 XM:i:0 XO:i:1 XG:i:1 NM:i:1 MD:Z:24^T26 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5037:2188 0 chr2L 18079848 44 50M * 0 0 ATCGTATTTTCCCGGTGACTAACAGTTCTTTAGCTAAATGTGTTTACAAA B7@BD2=BFBHF?1812+<,<@FBC9DHEBC??:BF4*?DB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5021:2188 16 chrUextra 23165690 1 50M * 0 0 AAGCTAAGGGTCCTGTTTCTTATTTTATTCTTCTTAGTGGAGATTCTTTT FD4FDG?::?)))@*;C**<+CC?AACDB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5208:2202 0 chr3R 16006245 44 50M * 0 0 GCTTCAGCTCTCCTTCTTTCTAATGGATTCACTATATGCACTGTTTACAC CCCFFFFFHHHHHJJIJJJJJIIJJJJJJJJJJIJIJJJJJJJJJJGIJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5122:2207 0 chrUextra 19047200 1 50M * 0 0 TTCTCAGCAGACAAAACCTTCGACTTTGCCTTCGGATCCTTTTCCTTCTT CCCFFFFFHHGHHJJJJJJJJJIJJJJIJJJJJJJHJJJIJJJGIIJIIJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5177:2209 0 chrU 9050993 1 12S38M * 0 0 TATTTGTAAGCTAGCTTAACGTAGGTAGATAACAAAAAGAACAAGGAATG CCCFFFDFHHHHHJJJJJJJJHIJJCHGHIJJJJJJJJJJIJJJJJIJJJ AS:i:76 XS:i:76 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:38 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5063:2210 0 chr3R 77147 44 50M * 0 0 CTGGGAGTTGGTTTAGACATCGAATGAAATAGCTTTCTTTGACAAAAGCT @CCFFFFFHHHHHIIIGIJJJIJIJIJJJJIJIJJIGIJJIJJIIEIIJJ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5240:2213 0 chrX 62113 1 50M * 0 0 AAGGGTAATGCGCTTATACAAAGTATGAGGAAAGTTTGCGAAAGACTTCA BCCFFBDFHHHHHJJJJJJJJJJFHIJJJJJJJJHHIJIJJJJJJJJJJJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5096:2214 16 chr3R 13705368 36 50M * 0 0 TTTGTCCCCCTAATATTCTGTGTAATGCGAATTTGGTTTGCGTCTGAATT ######@?4??<9?090)0*0**FD:)?2HFC8;;A8AC00=:22++111 AS:i:73 XN:i:0 XM:i:6 XO:i:0 XG:i:0 NM:i:6 MD:Z:5T2A8G4C22T0G3 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5158:2220 0 chr3L 13020742 44 50M * 0 0 CACATTATTATTAACAATTAGACTCTAAAAATCTGAAATATTAAGTGATT CCCFFFFFHHHHHJJJJJJJJIJJJJJJJJJJJJJJJJJJJIJJJIIIJI AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5074:2223 16 chr2L 15300493 44 5S45M * 0 0 ATGCTAGATTTACTTCGTCTGCTAAACTATTTTCCAACATAAAGTGATAC GF>GHEBHG?BIGDAHFEJJIHGGIJHGGDFHFIIGJHHFFHFDFDD@B@ AS:i:90 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:45 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5017:2224 0 chrUextra 243820 31 50M * 0 0 TCTAATTGGAGCTCCTGAAAATTTTGACGAAAGTAAGACAATCAGCTCTT B@@DFDEBHDFDAGHGEDHIJIIJJEAHF?FGG:DHDC@DH?F################# YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5469:2154 4 * 0 0 * * 0 0 NGANNTCGGTCAATTTNNGTAGTTAGGATAAGGNNNNNNNNNNNNNNNNN #1:##22BF:DHHGGI##33@? AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5402:2250 4 * 0 0 * * 0 0 CCTATCAATTTATAAATGTCTCTCCAAAAACTTGCAGGAGGAAAATAGTT ################################################## YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5736:2103 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5589:2105 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5501:2106 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5542:2106 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5514:2106 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5525:2115 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5712:2121 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5748:2124 4 * 0 0 * * 0 0 NNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5690:2126 4 * 0 0 * * 0 0 NNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5546:2126 4 * 0 0 * * 0 0 NNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5651:2135 4 * 0 0 * * 0 0 NNNNNAACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####22BFHH####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5730:2137 4 * 0 0 * * 0 0 NNNNNAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####44BFHH####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5669:2146 4 * 0 0 * * 0 0 NNNNNACGACTTATNNNNNNNNNGACGTTAAGNNNNNNNNNNNNNNNNNN #####42AFHHHHJ#########11@DHIHJI################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5618:2154 4 * 0 0 * * 0 0 NATNNGTAAATGGATTNNAATTACCTTCGCACANNNNNNNNNNNNNNNNN #1=##42AFHHHHJJJ##3DDDDDDDDDDFEHJJHF@JIJJJHJJJJIHJJIGJHHHHHFFFFFCCC AS:i:91 XS:i:51 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:10C38 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5504:2197 16 chr2L 8362354 44 50M * 0 0 GAAGACCCGGCAAAGCAACACAAAAACTATATACAGATATTGTAAATAAT IJHGDJJJJJJJJJJIIHHGJJJJJJJJJJJIIJJJJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5707:2197 0 chr3L 3858717 44 49M1S * 0 0 CATCGGATCGCATTGGATCTGAACCCATCCCGAGAAAACCCATCACCAGT CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJGIIJJJJJJJJJIJJIGH AS:i:98 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:49 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5581:2205 16 chr2R 12892366 44 50M * 0 0 TGTTGCGACCAAATAGATAGCATCTTTTTTCATCCACCATCAGTTTTTGT JJIHGIHDJJJJJIJJJJJJIHIJJJJJJIIHGIHFJHHHHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5615:2217 0 chr2RHet 857356 1 13S37M * 0 0 CGCTCCACAAGCTAGCTTTTCTTGGACTGACAGGATATTATCGTAAATTT CCCFFFFFHGFHFIIJIJJIJJJJJGIJCHHJIJEIJJJIJIJ@GIHIJG AS:i:74 XS:i:74 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:37 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5517:2218 4 * 0 0 * * 0 0 CATGGTAAACATATTTGTAGTCGGAAAGGAAGCCACAATTTATACTAACC :+1+++,2+2+2+3C,AC3,@HEGFCFCA+2A2??;88DED?B@? AS:i:94 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:20T29 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5624:2230 0 chr3L 22176883 36 36M14S * 0 0 CAGGTTGCATCCGCCCGATCAGGCAGAGCTTAAGCTAGCTTTGGCAGTCA ?;;D422AA?4,=,1@BFD?9FCH>AFF9CF?D1?DCFHGEECGDIGG AS:i:93 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:33A16 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5622:2248 16 chrUextra 14341773 1 50M * 0 0 GTCCCTGGTGGCTATATGCATCAGTCACGGACTCTTTGATGGCTTGGAGA HEJIJGJJJJJIJIJJJIJJIJIJIHGJIHFJJJJJJHHHHHFFFFFCCC AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5665:2250 16 chr2L 15999523 28 34M16S * 0 0 ATTTACATTTTACAGTTATTGTCTAGCCAAAGCTAGCTTGTATCCTAAAG CFHCFGGA?:C>DH############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5856:2162 4 * 0 0 * * 0 0 NAANNTGAACCTGAAGATCCATCGTGGCCAGACGGTNNNTNNNNNNNNNN #1=##22BFHHFGIIJJJJIIGIJIIJIJIIIGHI?############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:5798:2164 4 * 0 0 * * 0 0 NACNNAAAAAAAAGCCGAGCCAAAGAAAGAAGAACACNNTTNNNNNNNNN #11##222++D?F@@@ AS:i:100 XS:i:74 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5866:2183 0 chrUextra 1386984 1 50M * 0 0 TAATTTTTTAAATGCAGAGTCATATTCTGGGTTGGTAGTGTCAATTTTCA CC@FFFFFHHHHGJJIIGGCHIJIIJIHIJJFHIIBBGDHHEIIJIJJHG AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5951:2185 16 chr3R 24889365 2 24S26M * 0 0 TCATATTCCAAATAATATAAAGCTAGCTTTTATTAAAGTGACTGTTTTAT JJJJJJJJJJJJJJJJJJIJJIJJJJJIJIJJJJJJJHHHHGFFFFFCCC AS:i:52 XS:i:48 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:26 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5768:2190 0 chrUextra 1143497 1 36M14S * 0 0 ATGGAATAAACTACTGAACGAAGTACTGCAAAAGATAGCTTTTTAAATTC CCCFFFFFHHHHHJJJJJJJJJJIJJJJJJJJJJJJJJJJJJJJJIJJJJ AS:i:72 XS:i:72 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:36 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5918:2199 16 chr3R 831816 1 8S42M * 0 0 TTCAAGCTAGCCTGTGGGTAACTGTATTTAGAGTAAAGTGGTAGATTGTG HFIJJJIJJIJJJIGJJJJJJJJJJJJJJJJJJJJJJHHHHHFFFFFCCC AS:i:84 XS:i:84 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:42 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5962:2201 0 chr3L 20326495 1 50M * 0 0 TTGTTCGTACATGCCCTTCTCTTGTAAAAGGTTTATAAGTGATCGCAAAT @@@DFFFFHGGHGEGGGIGGIIJIHAHGHGIGHIIIDGGGGFFIIFIGGE AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5870:2202 16 chrX 6091042 44 50M * 0 0 GGAAACGGAAGGAACCCCCGAGACTGCGGATATGTGACCCTAATCTCCAC ################BFB?*::6H7?F?BFIBE?EA3DAAFB2+:;;=B AS:i:92 XN:i:0 XM:i:2 XO:i:0 XG:i:0 NM:i:2 MD:Z:6A8T34 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5850:2202 0 chr3L 885763 28 13S37M * 0 0 AACCAATGAAGCTAGCTTCTGTTAGATAAGGCTAATAACTGTTTTTATGA CCCFFFFFHHHGHJJIJJJJJJJIJJJJJJIIJIJJJJJJJIJJJJDHHH AS:i:66 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:27A9 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5820:2203 0 chrUextra 23022144 1 50M * 0 0 CAATCTCATTATTGCTAGACGCAATTTGTCTGTTTAAGAAGCTAGTGTCC CCCFFFFFHHHHHIJJJJJJJJJIIJJJIJJJJJJJJJJJJJJJJIJHIJ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5794:2204 0 chr3R 9044992 44 50M * 0 0 CGTTAAAAGAACTAAAAAAAATAAAACAGCTTAAACGTCAGGAATTTTTT CCCFFFFFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJFHJJJJJJJJJJH AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5984:2204 0 chr3L 11426607 44 46M4S * 0 0 TTTTGCCGCAGTATTCCTAGTGCGATTTGGGGAAAGCTATTAAGCTAGCC CCCFFFFFHHHHHJJJJJJJIIIIHJJJJIJJJJJJJJJJJIIJJJJJIJ AS:i:92 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:46 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5940:2204 0 chrX 21675709 1 48M2S * 0 0 AAAATATAAAATATAGAGAGTTAAATTGGGCACCCTCTTAACGAAGGTAG CCCFFFFFHHHHHJIIHIHIHJJJJJJJJJJJJJJIJJJIJJJGIIJGIG AS:i:96 XS:i:96 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:48 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5895:2206 16 chr2RHet 753616 31 50M * 0 0 TAATCCAATGAAATTTAAAAGGATATGTAAACAACTACAGCCAACTCCTA EJHGJIIJIEIJIGGJJIIJJHIEJJIGJIIJIIIJJHHHHHFEEDF@@B AS:i:100 XS:i:93 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5877:2214 16 chr3R 24506087 44 50M * 0 0 ATATTTGTGTGGGGGCGTTACCCATTAGTTGAAACTAAAACAACAGTTAC IIJJJJJJIGJJIJJFIIHFIGHIJIJIGGJJHFIIJHHHHHFFFFF@BB AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5838:2218 0 chrX 8186113 44 50M * 0 0 ATTTATTAGGAGTTTCTTTTTTTTAAGTCGATTAACATTTGTGTAATCAC @@@DFFFFHHHHHDIGIJJJIJJIHIDGGGHGHGJGIGGIIHEHGGC=FG AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5961:2219 16 chr2L 2304012 44 50M * 0 0 GACTTGGGGCGAATTTTAGATTGCAGAACTGGCGAATCAATTTAACACAT GBGHDJJIIIGIHEGGEHCIGIHHFCGGIHGHECHIGHHHHGFFDFD@@@ AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5980:2224 16 chrUextra 64288 14 37M13S * 0 0 TGGCGGGATAGACAGCCGAAAATGCAGCACACAAGCTAGCTTCGCTTTAA GHGGHFDGHGFGIGGGIIIIIHEHGF9;?EAIHFHEFFFHHFFFFFF@CB AS:i:74 XS:i:67 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:37 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5898:2225 0 chr4 241590 44 50M * 0 0 ATATTCTGCTAGACAAGACAAATATCTGTAATCTATTTGATATATTTGTA ;<1ADDDBB>>DGIHGHFGBIGAHHGGHGDFFFFB@@ AS:i:100 XS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5835:2238 16 chr3L 19168437 9 29M21S * 0 0 ATTAAAAATATCCGGGAGGGGCGAAAGATAGCTTATTGTTCATTATTTCA ###########HGGHD;GIHGGBDGDCIIIEJGHHEGFHHHHFEDFF@@C AS:i:54 XS:i:42 XN:i:0 XM:i:1 XO:i:0 XG:i:0 NM:i:1 MD:Z:3C25 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5890:2243 0 chr2L 6333842 9 22S28M * 0 0 GCTTCCAATATGGTTTTGAGCTAGCTTATGCGGTTCACTTACCTGTCCAA CCCFFFFFHHHHHIIJJJGJJJJJJJJJJJJJJHIJJIJJJJJJJJJJIJ AS:i:56 XS:i:44 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:28 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5996:2244 0 chr3R 12827595 44 50M * 0 0 CGCGGAACTCGTTGACCTTGTGTCTGTAGTATGCGTGGTAGGGATCTCCG @@CFFFDDHHHFDIDEHIJJIGHIGI@DGGIIIJJGGIBGHHGGGCHIJE AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5852:2246 0 chr2R 12599260 36 15S35M * 0 0 TTTTCTTGATAAGCTAGATTCATGGAGTTTTCTTCTTTCTCTCTTGTGCA B+:BBDDDAFDHDEB9BFFC<+<9AA?CFHGGH9FAB?FH9:BGA AS:i:70 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:35 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:5976:2248 16 chr2L 7437568 44 50M * 0 0 TATTGCGCGTCCTGTCCGCATAGGAAAATCGAAAATCAACCCCCCAGCAA DDBBDDDDDBDDDDDDDDDDDDDEDDDEDDEDEDDDDDBDHHFFFFFCCC AS:i:100 XN:i:0 XM:i:0 XO:i:0 XG:i:0 NM:i:0 MD:Z:50 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6084:2103 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6120:2104 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6027:2107 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6055:2108 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6071:2113 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6198:2114 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6171:2120 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6218:2121 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6121:2121 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6096:2122 4 * 0 0 * * 0 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6149:2125 4 * 0 0 * * 0 0 NNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6044:2125 4 * 0 0 * * 0 0 NNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6120:2136 4 * 0 0 * * 0 0 NNNNNTATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####22ACFF####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6185:2137 4 * 0 0 * * 0 0 NNNNNGATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN #####22AFHH####################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6108:2138 4 * 0 0 * * 0 0 NNNNNAAACCGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6150:2142 4 * 0 0 * * 0 0 NNNNNTTTTTTTTNNNNNNNNNNNNNCCTNCNNNNNNNNNNNNNNNNNNN #####22=CBHH###################################### YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6140:2157 4 * 0 0 * * 0 0 NTANNTAATATTTACCCNCCCAAACTTATTGCCANNNNNNNNNNNNNNNN #4=##2=BFDHHHJJIJ#3CGHIIJIGJJI@GHH################ YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6220:2160 4 * 0 0 * * 0 0 NACNNACGTGTGCTTGTNTTGCGGGCAGGCATGGGANNNANNNNNNNNNN ################################################## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6080:2161 4 * 0 0 * * 0 0 NGGNNCAGCTGTAGATGNAAGCAATTAGCTGCGCATNNNTNNNNNNNNNN #1=##2=DHHHHHJIJJ#3CGHHIIJIIJJJIIJJJ############## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6107:2165 4 * 0 0 * * 0 0 NAANNTGGGTTAAATTTATGAGCTTAAGATAATGCGGNGCCCNNNNNNNA #1=##2=DHFHHHJJJJJJJJJJJJJJJIJJIJJJJJ#0?GH######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6008:2166 4 * 0 0 * * 0 0 NATNNGGTCATTTGATTGTAAGATAGCTTATTTCATTCATTTNNNNNNNT #1:##222AADDHIFEFGHGIJGHDHGGICHIJB>FGGGIII######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6164:2167 4 * 0 0 * * 0 0 NGGNNACTAAGTTTTAAAACCAACATATAAAAATAAAAAATTNNNNNNNT #1=##2=BFHHFHIJIIIFIIGIIIJIJIJJIIIGGIIJIJI######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6028:2168 4 * 0 0 * * 0 0 AAACNTACCCTCTACGATGATATATGTCTCAACGCATTTATCNNNNNNNT @@@F#2=DDHHHGIIJHGHIIJHHIGHHHGGGHIIFEGGEGD######## YT:Z:UU YF:Z:NS
+HWI-ST1180:36:C0TU1ACXX:1:1101:6130:2172 16 chr3L 20041251 28 38M12S * 0 0 GNTGNNTGAGTACGTGTTTGTTGGCAGGCGGCGAAGCTAGCTTCACAACA #######B;GHDGBHHIGGDBG>F;:EGDEHEGGGG@FF?DDFDD;A=@B AS:i:67 XN:i:0 XM:i:3 XO:i:0 XG:i:0 NM:i:3 MD:Z:1C2G0C32 YT:Z:UU
+HWI-ST1180:36:C0TU1ACXX:1:1101:6218:2174 16 chr2R 19964520 28 11S39M * 0 0 ANTGNNAATCTAGCTTTCAAACATCTTCGTCAAAATCCAATCCATAATTT ######FECJGGGIGG