Mercurial > repos > bgruening > hicexplorer_hiccomparematrices

comparison test-data/hicHyperoptDetectLoops/loops.bedgraph @ 11:80abd5e2922a draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
author iuc
date Tue, 16 Mar 2021 15:11:23 +0000
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children e03780179ee5
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10:c48c29d59359 11:80abd5e2922a
1 # Created by HiCExplorer hicHyperoptDetectLoops 3.6
2
3 {'matrixFile': 'matrix.cool', 'maxLoopDistance': 2600000, 'maximumNumberOfLoops': 5, 'oet': 4.594451600287669, 'p': 0.07561093779253786, 'peakWidth': 2, 'pit': 68.07931954714506, 'pp': 0.021875258449572325, 'proteinFile': 'hicValidateLocations/GSM935376_hg19_Gm12878_Smc3.narrowPeak', 'resolution': 2, 'threads': 1, 'windowSize': 10}