comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_19093103_19093103_Tfap2d_H0_rejected.txt @ 3:a9b3dfde1f31 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author iuc
date Tue, 24 Mar 2020 13:37:24 -0400
parents 536a6f0d260c
children
comparison
equal deleted inserted replaced
2:536a6f0d260c 3:a9b3dfde1f31
1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
2 # This file contains the p-values computed by chi2 test 2 # This file contains the p-values computed by chi2 test
3 # To test the smoothed (float) values they were rounded up to the next integer 3 # To test the smoothed (float) values they were rounded up to the next integer
4 # 4 #
5 # Alpha level 0.5 5 # Alpha level 0.5
6 # Degrees of freedom 1 6 # Degrees of freedom 1
7 # 7 #
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 472.0
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_19093103_19093103 18.89 Mbp 19.29 Mbp Tfap2d Sum of interactions in fixate range: 800.0
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
11 chr1 19188000 19232000 Tfap2d 138000 472.00000 23.40000 800.00000 115.00000 0.00000 11 chr1 19077000 19118000 Tfap2d 24000 472.00000 349.00000 800.00000 534.00000 0.25577
12 chr1 19120000 19274000 Tfap2d 180000 472.00000 86.00000 800.00000 214.00000 0.00599