diff test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.bed @ 0:8d764e8acdf5 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa19d3b6a9d0160a13f8d1e4a99f20c4dbe937b2-dirty"
author bgruening
date Mon, 16 Dec 2019 17:26:46 -0500
parents
children c6f32406aa3c
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_rejected.bed	Mon Dec 16 17:26:46 2019 -0500
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+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.2-dev
+# This file contains the p-values computed by fisher test
+# To test the smoothed (float) values they were rounded up to the next integer
+#
+# Alpha level 0.5
+# Degrees of freedom 1
+#
+# FL-E13-5_chr1.cool	chr1_14300280_14300280	14.10  Mbp	14.50  Mbp	Eya1	Sum of interactions in fixate range: 673.0
+# MB-E10-5_chr1.cool	chr1_14300280_14300280	14.10  Mbp	14.50  Mbp	Eya1	Sum of interactions in fixate range: 832.0
+#Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
+chr1	14274000	14279000	Eya1	-22000	673.00000	7.00000	832.00000	0.00000		0.00366
+chr1	14310000	14322000	Eya1	21000	673.00000	54.80000	832.00000	52.80000		0.23002
+chr1	14361000	14407000	Eya1	106000	673.00000	21.20000	832.00000	36.00000		0.34706
+chr1	14426000	14432000	Eya1	131000	673.00000	2.40000	832.00000	9.00000		0.24523
+chr1	14447000	14455000	Eya1	154000	673.00000	4.40000	832.00000	12.40000		0.23210
+chr1	14491000	14500000	Eya1	199000	673.00000	17.65000	832.00000	15.75000		0.38515