Mercurial > repos > bgruening > hicexplorer_hiccompartmentspolarization
diff test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt @ 3:a9b3dfde1f31 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author | iuc |
---|---|
date | Tue, 24 Mar 2020 13:37:24 -0400 |
parents | 536a6f0d260c |
children |
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--- a/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt Wed Mar 11 16:51:22 2020 -0400 +++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt Tue Mar 24 13:37:24 2020 -0400 @@ -1,4 +1,4 @@ -# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 +# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 # This file contains the p-values computed by chi2 test # To test the smoothed (float) values they were rounded up to the next integer # @@ -8,4 +8,7 @@ # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value -chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.17177 +chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335 +chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 0.97540 +chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.05733 +chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.18635