Mercurial > repos > bgruening > hicexplorer_hiccompartmentspolarization

diff test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.bed @ 1:c6f32406aa3c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author bgruening
date Wed, 05 Feb 2020 19:49:53 -0500
parents 8d764e8acdf5
children
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--- a/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.bed	Mon Dec 16 17:26:46 2019 -0500
+++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.bed	Wed Feb 05 19:49:53 2020 -0500
@@ -1,16 +1,12 @@
-# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.2-dev
+# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1
 # This file contains the p-values computed by fisher test
 # To test the smoothed (float) values they were rounded up to the next integer
 #
 # Alpha level 0.5
 # Degrees of freedom 1
 #
-# FL-E13-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 810.0
-# MB-E10-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 978.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 810.0
+# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool	chr1_4487435_4487435	4.29  Mbp	4.69  Mbp	Sox17	Sum of interactions in fixate range: 978.0
 #Chromosome	Start	End	Gene	Relative distance	sum of interactions 1	target_1 raw	sum of interactions 2	target_2 raw	p-value
-chr1	4472000	4503000	Sox17	15000	810.00000	566.20000	978.00000	724.40000		0.44082
-chr1	4507000	4516000	Sox17	28000	810.00000	38.80000	978.00000	19.00000		0.00117
-chr1	4520000	4531000	Sox17	43000	810.00000	10.40000	978.00000	22.20000		0.16402
-chr1	4533000	4543000	Sox17	55000	810.00000	6.80000	978.00000	12.20000		0.37847
-chr1	4562000	4593000	Sox17	105000	810.00000	25.00000	978.00000	23.20000		0.46860
-chr1	4664000	4669000	Sox17	181000	810.00000	1.20000	978.00000	5.40000		0.30594
+chr1	4534000	4544000	Sox17	56000	810.00000	7.00000	978.00000	13.20000		0.37830
+chr1	4585000	4590000	Sox17	102000	810.00000	8.00000	978.00000	2.40000		0.12513