Mercurial > repos > bgruening > hicexplorer_hicdetectloops

annotate test-data/hicHyperoptDetectLoops/loops.bedgraph @ 11:4375e25de06a draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 69bb60ab875c1c1769298678f0890d8b92f1899d
author iuc
date Thu, 05 Dec 2024 18:03:32 +0000
parents ffc33339cd3e
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4375e25de06a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 69bb60ab875c1c1769298678f0890d8b92f1899d
iuc
parents: 9
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1 # Created by HiCExplorer hicHyperoptDetectLoops 3.7.6
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c3f9037423bd "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 2a0943e78bdc8ebb13f181399206a9eea37ed78f"
iuc
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4375e25de06a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 69bb60ab875c1c1769298678f0890d8b92f1899d
iuc
parents: 9
diff changeset
3 {'chrPrefixLoops': None, 'matrixFile': 'matrix.cool', 'maxLoopDistance': 1300000, 'maximumNumberOfLoops': 5, 'oet': 2.8714859798937415, 'p': 0.012586549394837264, 'peakWidth': 8, 'pit': 63.88073951584609, 'pp': 0.06112040451977812, 'proteinFile': '/tmp/tmpgf9pvov_/files/2/9/7/dataset_2978768e-39c0-4648-aa6e-8f81c54806cb.dat', 'resolution': 2, 'threads': 1, 'windowSize': 11}