Mercurial > repos > bgruening > hicexplorer_hicdetectloops

view test-data/hicHyperoptDetectLoops/loops.bedgraph @ 8:0410b6aada45 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 07802a6bd441d9da888cfb8283f8c2135704f7c9
author iuc
date Wed, 18 Oct 2023 10:41:24 +0000
parents c3f9037423bd
children ffc33339cd3e
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# Created by HiCExplorer hicHyperoptDetectLoops 3.6

{'matrixFile': 'matrix.cool', 'maxLoopDistance': 2600000, 'maximumNumberOfLoops': 5, 'oet': 4.594451600287669, 'p': 0.07561093779253786, 'peakWidth': 2, 'pit': 68.07931954714506, 'pp': 0.021875258449572325, 'proteinFile': 'hicValidateLocations/GSM935376_hg19_Gm12878_Smc3.narrowPeak', 'resolution': 2, 'threads': 1, 'windowSize': 10}