Mercurial > repos > bgruening > hicexplorer_hicfindrestrictionsites

comparison test-data/hicInfo/hicInfo_output.txt @ 1:fc0667d83f7c draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
author bgruening
date Wed, 05 Feb 2020 19:52:08 -0500
parents 8339f6708553
children 6c5097f6d41e
comparison
equal deleted inserted replaced
0:8339f6708553 1:fc0667d83f7c
1 # Matrix information file. Created with HiCExplorer's hicInfo version 3.3 1 # Matrix information file. Created with HiCExplorer's hicInfo version 3.4
2 File: matrix_name.h5 2 File: matrix_name.h5
3 Size: 33,754 3 Size: 33,754
4 Bin_length: 5000 4 Bin_length: 5000
5 Sum of matrix: 35778.0 5 Sum of matrix: 35778.0
6 Chromosomes: chr2L, chr2LHet, chr2R, chr2RHet, chr3L, chr3LHet, chr3R, chr3RHet, chr4, chrM, chrUextra, chrU, chrX, chrXHet, chrYHet 6 Chromosomes:length: chr2L: 23011544 bp; chr2LHet: 368872 bp; chr2R: 21146708 bp; chr2RHet: 3288761 bp; chr3L: 24543557 bp; chr3LHet: 2555491 bp; chr3R: 27905053 bp; chr3RHet: 2517507 bp; chr4: 1351857 bp; chrM: 19517 bp; chrUextra: 29004656 bp; chrU: 10049037 bp; chrX: 22422827 bp; chrXHet: 204112 bp; chrYHet: 347038 bp;
7 Non-zero elements: 69,213 7 Non-zero elements: 69,213
8 Minimum (non zero): 1 8 Minimum (non zero): 1
9 Maximum: 8 9 Maximum: 8
10 NaN bins: 0 10 NaN bins: 0