Mercurial > repos > bgruening > hicexplorer_hicfindrestrictionsites

view test-data/hicHyperoptDetectLoops/loops.bedgraph @ 7:9369e9b11b8d draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 45892bbb7b760b9d35299ed50028d4c5c5741970"
author iuc
date Thu, 08 Apr 2021 20:44:50 +0000
parents 8823a9d45ed0
children 972dcccb5bbc
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# Created by HiCExplorer hicHyperoptDetectLoops 3.6

{'matrixFile': 'matrix.cool', 'maxLoopDistance': 2600000, 'maximumNumberOfLoops': 5, 'oet': 4.594451600287669, 'p': 0.07561093779253786, 'peakWidth': 2, 'pit': 68.07931954714506, 'pp': 0.021875258449572325, 'proteinFile': 'hicValidateLocations/GSM935376_hg19_Gm12878_Smc3.narrowPeak', 'resolution': 2, 'threads': 1, 'windowSize': 10}