Mercurial > repos > bgruening > hicexplorer_hichyperoptdetectloops

annotate test-data/hicDifferentialTAD/accepted.txt @ 1:89fb1aab755b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
author iuc
date Thu, 12 Jan 2023 17:22:44 +0000
parents dde6b320a34b
children 7f7c6ead2d0d
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dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
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1 # Created with HiCExplorer's hicDifferentialTAD version 3.6
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
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2 # H0 'regions are equal' H0 is accepted for all p-value greater the user given p-value threshold; i.e. regions in this file are not considered as differential.
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
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3 # Accepted regions with Wilcoxon rank-sum test to p-value: 1.0 with used mode: all and modeReject: one
dde6b320a34b "planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
bgruening
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4 # Chromosome start end name score strand p-value left-inter-TAD p-value right-inter-TAD p-value intra-TAD