Mercurial > repos > bgruening > hicexplorer_hichyperoptdetectloops
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt @ 0:dde6b320a34b draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
| author | bgruening |
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| date | Tue, 16 Mar 2021 20:14:14 +0000 |
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| -1:000000000000 | 0:dde6b320a34b |
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| 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 | |
| 2 # This file contains the p-values computed by fisher test | |
| 3 # To test the smoothed (float) values they were rounded up to the next integer | |
| 4 # | |
| 5 # Alpha level 0.5 | |
| 6 # Degrees of freedom 1 | |
| 7 # | |
| 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 | |
| 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 | |
| 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | |
| 11 chr1 4512000 4529000 Sox17 41000 810.00000 24.80000 978.00000 33.20000 0.69177 | |
| 12 chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.37830 | |
| 13 chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.12513 |