Mercurial > repos > bgruening > hicexplorer_hicinfo
comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt @ 3:172137e5fadb draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author | iuc |
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date | Tue, 24 Mar 2020 13:36:28 -0400 |
parents | de14870013da |
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2:de14870013da | 3:172137e5fadb |
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1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 | 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3 |
2 # This file contains the p-values computed by chi2 test | 2 # This file contains the p-values computed by chi2 test |
3 # To test the smoothed (float) values they were rounded up to the next integer | 3 # To test the smoothed (float) values they were rounded up to the next integer |
4 # | 4 # |
5 # Alpha level 0.5 | 5 # Alpha level 0.5 |
6 # Degrees of freedom 1 | 6 # Degrees of freedom 1 |
7 # | 7 # |
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 | 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 |
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 | 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 |
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value | 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value |
11 chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.33893 | |
12 chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.04116 |