Mercurial > repos > bgruening > hicexplorer_hicinterintratad

diff hicInterIntraTAD.xml @ 1:c261b6b05ee3 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
author iuc
date Mon, 01 Jul 2024 20:06:25 +0000
parents 55b013e59018
children
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--- a/hicInterIntraTAD.xml	Wed Oct 18 17:02:07 2023 +0000
+++ b/hicInterIntraTAD.xml	Mon Jul 01 20:06:25 2024 +0000
@@ -1,4 +1,4 @@
-<tool id="hicexplorer_hicinterintratad" name="@BINARY@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@">
+<tool id="hicexplorer_hicinterintratad" name="@BINARY@" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@">
     <description>computes the ratio of inter TAD-scores vs. intra TADs</description>
     <macros>
         <token name="@BINARY@">hicInterIntraTAD</token>
@@ -54,11 +54,11 @@
     <tests>
         <test>
             <param name="matrix_h5_cooler" value="hicInterIntraTAD/matrix.cool" />
-            <param name="tadDomains" value="hicInterIntraTAD/untreated_R1_domains_chr1_chr2.bed" />
+            <param name="tadDomains" value="hicInterIntraTAD/untreated_R1_domains_chr1_chr2.bed" ftype="bed" />
             
             <output name="output_txt" file="hicInterIntraTAD/output.txt" ftype="txt" />
             
-            <output name="output_plot" file="hicInterIntraTAD/plot.png" ftype="png" />
+            <output name="output_plot" file="hicInterIntraTAD/plot.png" ftype="png" compare="sim_size" delta="10000"/>
             
         </test>