Mercurial > repos > bgruening > hicexplorer_hicmergedomains
view test-data/cHi-C/chicQualityControl/new_referencepoints.bed_report @ 0:6b9b4fd51308 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 55de003830db380639df997cdc5810df8022f63e"
author | bgruening |
---|---|
date | Tue, 16 Mar 2021 19:37:51 +0000 |
parents | |
children | b376ef118807 |
line wrap: on
line source
# Created with chicQualityControl version 3.6 # QC report for matrices: 0_matrix.cool 1_matrix.cool #Sparsity threshold for rejection: sparsity <= 0.05 are rejected. Number of reference points: 43 Number of accepted reference points: 35 Number of rejected reference points: 8 Number of faulty reference points: 0 A faulty reference point is caused by the non-presence of the chromosome in one of the given matrices. It can also be caused by the non-presence of valid Hi-C reads in a region, especially at the chromosome ends. Please check the results of hicInfo to validate this for your data.