Mercurial > repos > bgruening > hicexplorer_hicmergeloops
diff test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed @ 0:49b82255b72f draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
author | bgruening |
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date | Mon, 16 Dec 2019 15:30:48 -0500 |
parents | |
children | aeb4f3e6678d |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.bed Mon Dec 16 15:30:48 2019 -0500 @@ -0,0 +1,18 @@ +# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.2-dev +# This file contains the p-values computed by fisher test +# To test the smoothed (float) values they were rounded up to the next integer +# +# Alpha level 0.5 +# Degrees of freedom 1 +# +# FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 +# MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 +#Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value +chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00366 +chr1 14285000 14308000 Eya1 7000 673.00000 389.40000 832.00000 479.80000 0.96586 +chr1 14310000 14322000 Eya1 21000 673.00000 54.80000 832.00000 52.80000 0.23002 +chr1 14361000 14407000 Eya1 106000 673.00000 21.20000 832.00000 36.00000 0.34706 +chr1 14426000 14432000 Eya1 131000 673.00000 2.40000 832.00000 9.00000 0.24523 +chr1 14447000 14455000 Eya1 154000 673.00000 4.40000 832.00000 12.40000 0.23210 +chr1 14460000 14465000 Eya1 164000 673.00000 3.20000 832.00000 7.60000 0.56425 +chr1 14491000 14500000 Eya1 199000 673.00000 17.65000 832.00000 15.75000 0.38515