Mercurial > repos > bgruening > hicexplorer_hicmergematrixbins

comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_results.txt @ 14:d5e27e6cfa59 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author iuc
date Tue, 24 Mar 2020 14:30:36 -0400
parents c5280c9117f3
children
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13:c5280c9117f3 14:d5e27e6cfa59
1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
2 # This file contains the p-values computed by chi2 test 2 # This file contains the p-values computed by chi2 test
3 # To test the smoothed (float) values they were rounded up to the next integer 3 # To test the smoothed (float) values they were rounded up to the next integer
4 # 4 #
5 # Alpha level 0.5 5 # Alpha level 0.5
6 # Degrees of freedom 1 6 # Degrees of freedom 1
7 # 7 #
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
11 chr1 14331000 14344000 Eya1 43000 673.00000 11.20000 832.00000 22.80000 0.17177 11 chr1 14274000 14279000 Eya1 -22000 673.00000 7.00000 832.00000 0.00000 0.00335
12 chr1 14290000 14439000 Eya1 138000 673.00000 523.00000 832.00000 645.00000 0.97540
13 chr1 14444000 14467000 Eya1 166000 673.00000 10.00000 832.00000 25.00000 0.05733
14 chr1 14476000 14501000 Eya1 200000 673.00000 30.25000 832.00000 26.15000 0.18635