Mercurial > repos > bgruening > hicexplorer_hicmergematrixbins

comparison test-data/cHi-C/chicDifferentialTest/batch_mode_chi2/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_results.txt @ 14:d5e27e6cfa59 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author iuc
date Tue, 24 Mar 2020 14:30:36 -0400
parents c5280c9117f3
children
comparison
equal deleted inserted replaced
13:c5280c9117f3 14:d5e27e6cfa59
1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 1 # Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.4.3
2 # This file contains the p-values computed by chi2 test 2 # This file contains the p-values computed by chi2 test
3 # To test the smoothed (float) values they were rounded up to the next integer 3 # To test the smoothed (float) values they were rounded up to the next integer
4 # 4 #
5 # Alpha level 0.5 5 # Alpha level 0.5
6 # Degrees of freedom 1 6 # Degrees of freedom 1
7 # 7 #
8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 8 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0
9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 9 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0
10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value 10 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value
11 chr1 4512000 4529000 Sox17 41000 810.00000 24.80000 978.00000 33.20000 0.70171 11 chr1 4480000 4549000 Sox17 61000 810.00000 640.00000 978.00000 798.00000 0.65155
12 chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.33893 12 chr1 4555000 4688000 Sox17 200000 810.00000 73.18333 978.00000 82.93333 0.70460
13 chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.04116