comparison test-data/cHi-C/chicQualityControl/new_referencepoints.bed_report @ 14:d5e27e6cfa59 draft

"planemo upload for repository commit 3d3fe0c7636592f01981d491dc8ff44bb55c1750"
author iuc
date Tue, 24 Mar 2020 14:30:36 -0400
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13:c5280c9117f3 14:d5e27e6cfa59
1 # Created with chicQualityControl version 3.4.3
2 # QC report for matrices:
3 #Sparsity threshold for rejection: sparsity <= 0.05 are rejected.
5 Number of reference points: 43
6 Number of accepted reference points: 35
7 Number of rejected reference points: 8
8 Number of faulty reference points: 0
11 A faulty reference point is caused by the non-presence of the chromosome in one of the given matrices.
12 It can also be caused by the non-presence of valid Hi-C reads in a region, especially at the chromosome ends.
13 Please check the results of hicInfo to validate this for your data.