diff test-data/cHi-C/chicQualityControl/new_referencepoints.bed_raw_filter @ 11:49c8055f6830 draft

"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 3b41d687ff30583540d055f6995de00530cca81d-dirty"
author bgruening
date Mon, 16 Dec 2019 15:46:21 -0500
parents
children d5e27e6cfa59
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/cHi-C/chicQualityControl/new_referencepoints.bed_raw_filter	Mon Dec 16 15:46:21 2019 -0500
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+# Created with chicQualityControl version 3.3
+# Chromosome	Start	End	Sparsity 0_matrix.cool	Sparsity 1_matrix.cool	
+chr1	4487435	4487435	Sox17	0.14485514485514486	0.16083916083916083
+chr1	14300280	14300280	Eya1	0.14285714285714285	0.1938061938061938
+chr1	19093103	19093103	Tfap2d	0.1048951048951049	0.16683316683316685
+chr1	19198995	19198995	Tfap2b	0.01898101898101898	0.016983016983016984
+chr1	24202042	24202042	Col9a1	0.10589410589410589	0.12787212787212787
+chr1	33776741	33776741	Rab23	0.15484515484515485	0.2137862137862138
+chr1	38684089	38684089	Aff3	0.11588411588411589	0.11388611388611389
+chr1	42753991	42753991	Pou3f3	0.04995004995004995	0.07592407592407592
+chr1	52176282	52176282	Stat1	0.19080919080919082	0.22777222777222778
+chr1	52557292	52557292	Nab1	0.02197802197802198	0.024975024975024976
+chr1	53118507	53118507	Mstn	0.3116883116883117	0.37462537462537465
+chr1	57028178	57028178	Satb2	0.12287712287712288	0.14385614385614387
+chr1	59821123	59821123	Bmpr2	0.14085914085914086	0.16983016983016982
+chr1	66991630	66991630	Myl1	0.0919080919080919	0.09290709290709291
+chr1	74648029	74648029	Stk36	0.2777222777222777	0.3356643356643357
+chr1	74818466	74818466	Wnt6	0.29270729270729273	0.34165834165834164
+chr1	74838593	74838593	Wnt10a	0.00999000999000999	0.008991008991008992
+chr1	74998246	74998246	Ihh	0.008991008991008992	0.003996003996003996
+chr1	75356867	75356867	Des	0.18081918081918083	0.21678321678321677
+chr1	77511663	77511663	Epha4	0.15684315684315683	0.22277722277722278
+chr1	78193711	78193711	Pax3	0.24375624375624375	0.3096903096903097
+chr1	89102386	89102386	Chrng	0.16783216783216784	0.2217782217782218
+chr1	93355905	93355905	Per2	0.15384615384615385	0.16483516483516483
+chr1	93698054	93698054	Twist2	0.22277722277722278	0.23476523476523475
+chr1	94076918	94076918	Hdac4	0.0	0.0
+chr1	107677300	107677300	Tnfrsf11a	0.14685314685314685	0.16383616383616384
+chr1	120950196	120950196	Gli2	0.13986013986013987	0.2007992007992008
+chr1	122499064	122499064	En1	0.1008991008991009	0.11988011988011989
+chr1	127808791	127808791	Lypd1	0.18681318681318682	0.22977022977022976
+chr1	135934092	135934092	Fmod	0.3516483516483517	0.4145854145854146
+chr1	136186581	136186581	MyoG	0.07392607392607392	0.09090909090909091
+chr1	152313295	152313295	Prg4	0.00999000999000999	0.006993006993006993
+chr1	164004278	164006270	mm712	0.26173826173826176	0.2867132867132867
+chr1	164147754	164147754	Dnm3os	0.24875124875124874	0.24675324675324675
+chr1	165243781	165243781	Prrx1	0.36063936063936064	0.34065934065934067
+chr1	165333772	165333772	Gorab	0.36863136863136864	0.3956043956043956
+chr1	169619689	169619689	Lmx1a	0.11888111888111888	0.16783216783216784
+chr1	170362300	170362300	Pbx1	0.003996003996003996	0.002997002997002997
+chr1	180249284	180249284	Gm16586	0.0	0.0
+chr1	182823250	182823250	Lefty2	0.27472527472527475	0.33266733266733267
+chr1	182865170	182865170	Lefty1	0.25674325674325676	0.3086913086913087
+chr1	188529871	188529871	Tgfb2	0.13486513486513488	0.16583416583416583
+chr1	194979306	194979306	Irf6	0.12987012987012986	0.15284715284715283