Mercurial > repos > bgruening > hicexplorer_hicmergematrixbins
diff test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.bed @ 12:faab8edcaac9 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 5744259254d4254a29cb7a6687fbbfd103301064"
| author | bgruening |
|---|---|
| date | Wed, 05 Feb 2020 20:00:33 -0500 |
| parents | 49c8055f6830 |
| children |
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--- a/test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.bed Mon Dec 16 15:46:21 2019 -0500 +++ b/test-data/cHi-C/chicDifferentialTest/regular_mode_fisher/FL-E13-5_MB-E10-5_chr1_chr1_14300280_14300280_Eya1_H0_accepted.bed Wed Feb 05 20:00:33 2020 -0500 @@ -1,12 +1,10 @@ -# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3 +# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 # This file contains the p-values computed by fisher test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # -# FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 -# MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 +# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 673.0 +# /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_14300280_14300280 14.10 Mbp 14.50 Mbp Eya1 Sum of interactions in fixate range: 832.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value -chr1 14285000 14308000 Eya1 7000 673.00000 389.40000 832.00000 479.80000 0.96586 -chr1 14460000 14465000 Eya1 164000 673.00000 3.20000 832.00000 7.60000 0.56425