Mercurial > repos > bgruening > hicexplorer_hicnormalize

diff test-data/hicHyperoptDetectLoops/loops.bedgraph @ 9:f34ab9882252 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 8586409c5f329eaf75902eedc3d29a6e82560788
author iuc
date Mon, 01 Jul 2024 19:55:26 +0000
parents 05257e5d5016
children 5e83c077e31d
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--- a/test-data/hicHyperoptDetectLoops/loops.bedgraph	Wed Oct 18 10:21:43 2023 +0000
+++ b/test-data/hicHyperoptDetectLoops/loops.bedgraph	Mon Jul 01 19:55:26 2024 +0000
@@ -1,3 +1,3 @@
-# Created by HiCExplorer hicHyperoptDetectLoops 3.6
+# Created by HiCExplorer hicHyperoptDetectLoops 3.7.3
 
-{'matrixFile': 'matrix.cool', 'maxLoopDistance': 2600000, 'maximumNumberOfLoops': 5, 'oet': 4.594451600287669, 'p': 0.07561093779253786, 'peakWidth': 2, 'pit': 68.07931954714506, 'pp': 0.021875258449572325, 'proteinFile': 'hicValidateLocations/GSM935376_hg19_Gm12878_Smc3.narrowPeak', 'resolution': 2, 'threads': 1, 'windowSize': 10}
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+{'chrPrefixLoops': None, 'matrixFile': 'matrix.cool', 'maxLoopDistance': 2300000, 'maximumNumberOfLoops': 5, 'oet': 1.230889168935347, 'p': 0.048940366161874596, 'peakWidth': 6, 'pit': 22.88867979095296, 'pp': 0.13365961880597724, 'proteinFile': '/tmp/tmpjkr0wi60/files/6/a/7/dataset_6a78c4eb-7f74-459b-9ed8-08972cc0c5f4.dat', 'resolution': 2, 'threads': 1, 'windowSize': 6}
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