Mercurial > repos > bgruening > hicexplorer_hicpca
comparison hicPCA.xml @ 15:41dbf4d162a2 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit fa140a9f660eab2459e21b0b637b129d7de24c02
| author | iuc |
|---|---|
| date | Tue, 10 Jan 2023 18:56:55 +0000 |
| parents | 3b5b54ed6392 |
| children | 77919cc3618e |
comparison
equal
deleted
inserted
replaced
| 14:3b5b54ed6392 | 15:41dbf4d162a2 |
|---|---|
| 93 <change_format> | 93 <change_format> |
| 94 <when input="outputFormat" value="bedgraph" format="bedgraph" /> | 94 <when input="outputFormat" value="bedgraph" format="bedgraph" /> |
| 95 </change_format> | 95 </change_format> |
| 96 </data> | 96 </data> |
| 97 | 97 |
| 98 <data name="pearson_outfile" from_work_dir="pearson" format="cool"> | 98 <data name="pearson_outfile" from_work_dir="pearson" format="cool" label="${tool.name} on ${on_string}: Pearson matrix"> |
| 99 <filter>pearsonMatrix</filter> | 99 <filter>pearsonMatrix</filter> |
| 100 <change_format> | 100 <change_format> |
| 101 <when input_dataset="matrix_h5_cooler" attribute="ext" value="h5" format="h5" /> | 101 <when input_dataset="matrix_h5_cooler" attribute="ext" value="h5" format="h5"/> |
| 102 </change_format> | 102 </change_format> |
| 103 </data> | 103 </data> |
| 104 <data name="obsexp_outfile" from_work_dir="obsexp" format="cool"> | 104 <data name="obsexp_outfile" from_work_dir="obsexp" format="cool" label="${tool.name} on ${on_string}: observed / expected matrix"> |
| 105 <filter>obsexpMatrix</filter> | 105 <filter>obsexpMatrix</filter> |
| 106 <change_format> | 106 <change_format> |
| 107 <when input_dataset="matrix_h5_cooler" attribute="ext" value="h5" format="h5" /> | 107 <when input_dataset="matrix_h5_cooler" attribute="ext" value="h5" format="h5" /> |
| 108 </change_format> | 108 </change_format> |
| 109 </data> | 109 </data> |
| 226 _________________ | 226 _________________ |
| 227 | 227 |
| 228 | For more information about HiCExplorer please consider our documentation on readthedocs.io_ | 228 | For more information about HiCExplorer please consider our documentation on readthedocs.io_ |
| 229 | 229 |
| 230 .. _readthedocs.io: http://hicexplorer.readthedocs.io/en/latest/index.html | 230 .. _readthedocs.io: http://hicexplorer.readthedocs.io/en/latest/index.html |
| 231 .. _`Lieberman-Aiden et al. (2009)`: https://doi.org/10.1126%2Fscience.1181369 | 231 .. _`Lieberman-Aiden et al. (2009)`: https://doi.org/10.1126/science.1181369 |
| 232 ]]> </help> | 232 ]]> </help> |
| 233 <expand macro="citations" /> | 233 <expand macro="citations" /> |
| 234 </tool> | 234 </tool> |