diff test-data/raw_qc_report @ 11:50171f863420 draft default tip

"planemo upload for repository https://github.com/maxplanck-ie/HiCExplorer/tree/master/galaxy/wrapper/ commit 91a0182476a7fc26be7bef1677790518c4e88348-dirty"

--- a/test-data/raw_qc_report	Sat Jun 09 15:40:12 2018 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,29 +0,0 @@
-
-File	matrix.h5		
-Pairs considered	983		
-Min rest. site distance	300		
-Max library insert size	1000		
-
-#	count	(percentage w.r.t. total sequenced reads)
-Pairs mappable, unique and high quality	300	(30.52)
-Pairs used	215	(21.87)
-One mate unmapped	506	(51.48)
-One mate not unique	13	(1.32)
-One mate low quality	164	(16.68)
-
-#	count	(percentage w.r.t. mappable, unique and high quality pairs)
-dangling end	0	(0.00)
-self ligation (removed)	0	(0.00)
-One mate not close to rest site	0	(0.00)
-same fragment	85	(28.33)
-self circle	0	(0.00)
-duplicated pairs	0	(0.00)
-
-#	count	(percentage w.r.t. total valid pairs used)
-inter chromosomal	24	(11.16)
-short range < 20kb	61	(28.37)
-long range	130	(60.47)
-inward pairs	42	(19.53)
-outward pairs	66	(30.70)
-left pairs	48	(22.33)
-right pairs	35	(16.28)