Mercurial > repos > bgruening > hicexplorer_hicplotviewpoint

diff hicPlotViewpoint.xml @ 9:84d4b83f092a draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 4b602d427e0fc0da5353a4510798349de98e4ae4"
author iuc
date Wed, 11 Mar 2020 07:00:21 -0400
parents 5e9c304c424c
children b637a1e3cb14
line wrap: on
line diff
--- a/hicPlotViewpoint.xml	Wed Feb 05 19:57:03 2020 -0500
+++ b/hicPlotViewpoint.xml	Wed Mar 11 07:00:21 2020 -0400
@@ -11,7 +11,7 @@
             ln -s '$m' ${counter}_matrix.$m.ext &&
         #end for
         #set $m = ' '.join([ '\'%s_matrix.%s\'' % ($counter, $matrix.ext) for $counter, $matrix in enumerate($matrix_h5_cooler_multiple) ])
-       
+
         @BINARY@ --matrix $m
         #if $interactionOutFileName:
             $interactionOutFileName interactions
@@ -20,9 +20,9 @@
         --region $region
         --referencePoint $referencePoint
         && mv plot.$image_file_format plot
-        
+
         #if $interactionOutFileName:
-            && mkdir interaction 
+            && mkdir interaction
             #for $counter, $matrix in enumerate($m.split(' ')):
                 && mv interactions_${matrix}.bedgraph interaction/${counter}_interactions.bedgraph
             #end for