Mercurial > repos > bgruening > hicexplorer_hicsummatrices
comparison hicSumMatrices.xml @ 8:c109622e0cf5 draft
planemo upload for repository https://github.com/maxplanck-ie/HiCExplorer/tree/master/galaxy/wrapper/ commit 0456f085bac2c88b8cbddfcf12b02776d2a0d457
| author | iuc |
|---|---|
| date | Wed, 07 Mar 2018 03:27:10 -0500 |
| parents | e0df60f3b0d5 |
| children | 0399cd2c25aa |
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| 7:e0df60f3b0d5 | 8:c109622e0cf5 |
|---|---|
| 1 <tool id="hicexplorer_hicsummatrices" name="@BINARY@" version="@WRAPPER_VERSION@.1"> | 1 <tool id="hicexplorer_hicsummatrices" name="@BINARY@" version="@WRAPPER_VERSION@.0"> |
| 2 <description>combines Hi-C matrices of the same size</description> | 2 <description>combines Hi-C matrices of the same size</description> |
| 3 <macros> | 3 <macros> |
| 4 <token name="@BINARY@">hicSumMatrices</token> | 4 <token name="@BINARY@">hicSumMatrices</token> |
| 5 <import>macros.xml</import> | 5 <import>macros.xml</import> |
| 6 </macros> | 6 </macros> |
| 7 <expand macro="requirements" /> | 7 <expand macro="requirements" /> |
| 8 <command detect_errors="exit_code"><![CDATA[ | 8 <command detect_errors="exit_code"><![CDATA[ |
| 9 | 9 |
| 10 #for $counter, $m in enumerate($matrix_h5_cooler_multiple): | 10 #for $counter, $m in enumerate($matrix_h5_cooler_multiple): |
| 11 ln -s '$m' ${counter}_matrix && | 11 ln -s '$m' ${counter}_matrix && |
| 12 #end for | 12 #end for |
| 13 #set $m = '" "'.join([ '%s_matrix' % $counter for $counter, $matrix in enumerate($matrix_h5_cooler_multiple) ]) | 13 #set $m = '" "'.join([ '%s_matrix' % $counter for $counter, $matrix in enumerate($matrix_h5_cooler_multiple) ]) |
| 14 | 14 |
| 15 hicSumMatrices | 15 hicSumMatrices |