Mercurial > repos > bgruening > hicexplorer_hicsummatrices
view test-data/cHi-C/chicDifferentialTest/batch_mode_fisher_outfile/FL-E13-5_MB-E10-5_chr1_chr1_4487435_4487435_Sox17_H0_rejected.txt @ 21:36dfa2825a59 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/hicexplorer commit 07802a6bd441d9da888cfb8283f8c2135704f7c9
author | iuc |
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date | Wed, 18 Oct 2023 10:15:10 +0000 |
parents | 759f6bb1432f |
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# Differential analysis result file of HiCExplorer's chicDifferentialTest version 3.3.1 # This file contains the p-values computed by fisher test # To test the smoothed (float) values they were rounded up to the next integer # # Alpha level 0.5 # Degrees of freedom 1 # # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/FL-E13-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 810.0 # /home/wolffj/src/HiCExplorer/hicexplorer/test/test_data/cHi-C/MB-E10-5_chr1.cool chr1_4487435_4487435 4.29 Mbp 4.69 Mbp Sox17 Sum of interactions in fixate range: 978.0 #Chromosome Start End Gene Relative distance sum of interactions 1 target_1 raw sum of interactions 2 target_2 raw p-value chr1 4534000 4544000 Sox17 56000 810.00000 7.00000 978.00000 13.20000 0.37830 chr1 4585000 4590000 Sox17 102000 810.00000 8.00000 978.00000 2.40000 0.12513