# HG changeset patch # User bgruening # Date 1707045452 0 # Node ID 2da980d606cb29a0edf5c17f7c2e145233248eb8 # Parent a2e75bad2872a3691055a409ce417acf5fd0d323 planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hictk commit c33dc6079f56bc640902043efb5e88c73c6a44f3 diff -r a2e75bad2872 -r 2da980d606cb hictk.xml --- a/hictk.xml Sat Feb 03 19:38:30 2024 +0000 +++ b/hictk.xml Sun Feb 04 11:17:32 2024 +0000 @@ -32,10 +32,19 @@ This repository hosts `hictk`: a set of CLI tools to work with Cooler, as well as `libhictk`: the C++ library underlying `hictk`. - hictk is capable of reading files in `.cool`, `.mcool`, `.scool` and `.hic` format (including hic v9) as well as writing `.cool` and `.mcool` files. + hictk_ is capable of reading files in `.cool`, `.mcool`, `.scool` and `.juicebox_hic` format (including hic v9) as well as writing `.cool` and `.mcool` files + but this tool only writes `juicebox_hic` at present. + +.. _hictk: https://github.com/paulsengroup/hictk ]]> - 10.1093/bioinformatics/bts573 - + @article{hictk, +author = {Roberto Rossini}, +year = {2023}, +url = {https://github.com/paulsengroup/hictk}, +title = {hictk: blazing fast toolkit to work with .hic and .cool files} +} + 10.1093/bioinformatics/bts573 +