Mercurial > repos > bgruening > hicup_digester

directory /test-data/ @ 7:e79c38f1752c draft default tip

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file HiCUP_summary_report_aQdQORylpl_22-59-39_22-02-2023.txt 1001 -rw-r--r--
file chr21And22FromHg38.fasta 99479035 -rw-r--r--
file dataset1.fastq 20442648 -rw-r--r--
file dataset1.fastq.truncation_barchart.svg 60806 -rw-r--r--
file dataset1.trunc.fastq.gz 3515514 -rw-r--r--
file dataset1.trunc.fastq.gz.mapper_barchart.svg 63206 -rw-r--r--
file dataset1_2.ditag_size_distribution.svg 60905 -rw-r--r--
file dataset1_2.ditag_size_distribution_report.txt 581 -rw-r--r--
file dataset1_2.filt.bam 45110 -rw-r--r--
file dataset1_2.filt.bam.deduplicator_cis_trans_piechart.svg 56552 -rw-r--r--
file dataset1_2.filt.bam.deduplicator_uniques_barchart.svg 57395 -rw-r--r--
file dataset1_2.filt.sam 225488 -rw-r--r--
file dataset1_2.hicup.bam 44930 -rw-r--r--
file dataset1_2.hicup.bam.prejuicer1 25860 -rw-r--r--
file dataset1_2.hicup.bam.prejuicer2 29171 -rw-r--r--
file dataset1_2.pair.bam 89729 -rw-r--r--
file dataset1_2.pair.bam.filter_piechart.svg 74135 -rw-r--r--
file dataset1_2_contiguous.filter.bam 537 -rw-r--r--
file dataset1_2_invalid.filter.bam 537 -rw-r--r--
file dataset1_2_re_ligation.filter.bam 3841 -rw-r--r--
file dataset1_2_same_circularised.filter.bam 2342 -rw-r--r--
file dataset1_2_same_dangling_ends.filter.bam 5896 -rw-r--r--
file dataset1_2_same_internal.filter.bam 36101 -rw-r--r--
file dataset2.fastq 20442648 -rw-r--r--
file dataset2.fastq.truncation_barchart.svg 62406 -rw-r--r--
file dataset2.trunc.fastq.gz 3526883 -rw-r--r--
file dataset2.trunc.fastq.gz.mapper_barchart.svg 65970 -rw-r--r--
file digest_file.txt 833855 -rw-r--r--