hicup_filter: test-data/results.html annotate

annotate test-data/results.html @ 2:cfa9c047cda4 draft

planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit c546c919808a853d3e1556cb28bb4a5f7e1f9932

author	bgruening
date	Tue, 07 Nov 2017 02:48:10 -0500
parents	566da23a5a08
children

rev	line source
0 566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	1 <!DOCTYPE html>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	2 <html>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	3 <head>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	4 <meta http-equiv="content-type" content="text/html; charset=UTF-8">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	5 <title>HiCUP Processing Report - dataset_1265_4.dat</title>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	6 <style type="text/css">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	7 body {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	9 font-size:14px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	10 padding:0 20px 20px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	11 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	12 .container {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	14 max-width:1200px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	15 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	16 .header_title {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	18 }
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	21 text-align:right;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	22 margin-top:40px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	23 }
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	31 h2 {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	34 h3 {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	36 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	37 h4 {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	40 h3, h4, hr {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	43 hr {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	48 height:0;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	49 }
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	53 .data {
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	74 .data_table thead tr th,
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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	95
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	96 .plot {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	97 width:650px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	98 max-width:100%;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	99 float:left;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	100 margin-bottom:30px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	101 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	102 #ditag_length_plot {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	103 width:100%;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	104 height:600px;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	105 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	106
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	107 footer {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	108 color:#999;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	109 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	110 footer a {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	111 color:#999;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	112 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	113 </style>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	114 </head>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	115 <body>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	116 <script>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	117 /*! jQuery v1.10.2 \| (c) 2005, 2013 jQuery Foundation, Inc. \| jquery.org/license
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	118 //@ sourceMappingURL=jquery-1.10.2.min.map
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	119 */
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r=this.options,i=r.type;this.labelFormatter=r.labels.formatter\|\|this.defaultLabelFormatter;this.userOptions=t;this.minPixelPadding=0;this.chart=e;this.reversed=r.reversed;this.zoomEnabled=r.zoomEnabled!==!1;this.categories=r.categories\|\|i==="category";this.isLog=i==="logarithmic";this.isDatetimeAxis=i==="datetime";this.isLinked=l(r.linkedTo);this.tickmarkOffset=this.categories&&r.tickmarkPlacement==="between"?.5:0;this.ticks={};this.minorTicks={};this.plotLinesAndBands=[];this.alternateBands={};this.len=0;this.minRange=this.userMinRange=r.minRange\|\|r.maxZoom;this.range=r.range;this.offset=r.offset\|\|0;this.stacks={};this.oldStacks={};this.stacksMax={};this._stacksTouched=0;this.min=this.max=null;var s,r=this.options.events;nn(this,e.axes)===-1&&(e.axes.push(this),e[n?"xAxis":"yAxis"].push(this));this.series=this.series\|\|[];if(e.inverted&&n&&this.reversed===W)this.reversed=!0;this.removePlotLine=this.removePlotBand=this.removePlotBandOrLine;for(s in r)an(this,s,r[s]);if(this.isLog)this.val2lin=u,this.lin2val=a},setOptions:function(e){this.options=t(this.defaultOptions,this.isXAxis?{}:this.defaultYAxisOptions,[this.defaultTopAxisOptions,this.defaultRightAxisOptions,this.defaultBottomAxisOptions,this.defaultLeftAxisOptions][this.side],t(wt[this.isXAxis?"xAxis":"yAxis"],e))},update:function(n,r){var i=this.chart,n=i.options[this.xOrY+"Axis"][this.options.index]=t(this.userOptions,n);this.destroy(!0);this._addedPlotLB=!1;this.init(i,e(n,{events:W}));i.isDirtyBox=!0;p(r,!0)&&i.redraw()},remove:function(e){var t=this.chart,n=this.xOrY+"Axis";rn(this.series,function(e){e.remove(!1)});f(t.axes,this);f(t[n],this);t.options[n].splice(this.options.index,1);rn(t[n],function(e,t){e.options.index=t});this.destroy();t.isDirtyBox=!0;p(e,!0)&&t.redraw()},defaultLabelFormatter:function(){var e=this.axis,t=this.value,n=e.categories,r=this.dateTimeLabelFormat,i=wt.lang.numericSymbols,s=i&&i.length,o,u=e.options.labels.format,e=e.isLog?t:e.tickInterval;if(u)o=w(u,this);else if(n)o=t;else if(r)o=Et(r,t);else if(s&&e>=1e3)for(;s--&&o===W;)n=Math.pow(1e3,s+1),e>=n&&i[s]!==null&&(o=g(t/n,-1)+i[s]);o===W&&(o=t>=1e3?g(t,0):g(t,-1));return o},getSeriesExtremes:function(){var e=this,t=e.chart;e.hasVisibleSeries=!1;e.dataMin=e.dataMax=null;e.stacksMax={};e.buildStacks();rn(e.series,function(n){if(n.visible\|\|!t.options.chart.ignoreHiddenSeries){var r=n.options,i;i=r.threshold;e.hasVisibleSeries=!0;e.isLog&&i<=0&&(i=null);if(e.isXAxis){if(i=n.xData,i.length)e.dataMin=Y(p(e.dataMin,i[0]),k(i)),e.dataMax=G(p(e.dataMax,i[0]),L(i))}else{r=r.stacking;e.usePercentage=r==="percent";if(e.usePercentage)e.dataMin=0,e.dataMax=99;n.getExtremes();r=n.dataMax;n=n.dataMin;if(!e.usePercentage&&l(n)&&l(r))e.dataMin=Y(p(e.dataMin,n),n),e.dataMax=G(p(e.dataMax,r),r);if(l(i))if(e.dataMin>=i)e.dataMin=i,e.ignoreMinPadding=!0;else if(e.dataMax<i)e.dataMax=i,e.ignoreMaxPadding=!0}}})},translate:function(e,t,n,r,i,s){var u=this.len,a=1,f=0,l=r?this.oldTransA:this.transA,r=r?this.oldMin:this.min,c=this.minPixelPadding,i=(this.options.ordinal\|\|this.isLog&&i)&&this.lin2val;if(!l)l=this.transA;n&&(a=-1,f=u);this.reversed&&(a=-1,f-=au);t?(e=ea+f,e-=c,e=e/l+r,i&&(e=this.lin2val(e))):(i&&(e=this.val2lin(e)),s==="between"&&(s=.5),e=a(e-r)l+f+ac+(o(s)?lsthis.pointRange:0));return e},toPixels:function(e,t){return this.translate(e,!1,!this.horiz,null,!0)+(t?0:this.pos)},toValue:function(e,t){return this.translate(e-(t?0:this.pos),!0,!this.horiz,null,!0)},getPlotLinePath:function(e,t,n,r){var i=this.chart,s=this.left,o=this.top,u,a,f,e=this.translate(e,null,null,n),l=n&&i.oldChartHeight\|\|i.chartHeight,c=n&&i.oldChartWidth\|\|i.chartWidth,h;u=this.transB;n=a=J(e+u);u=f=J(l-e-u);if(isNaN(e))h=!0;else if(this.horiz){if(u=o,f=l-this.bottom,n<s\|\|n>s+this.width)h=!0}else if(n=s,a=c-this.right,u<o\|\|u>o+this.height)h=!0;return h&&!r?null:i.renderer.crispLine(["M",n,u,"L",a,f],t\|\|0)},getPlotBandPath:function(e,t){var n=this.getPlotLinePath(t),r=this.getPlotLinePath(e);r&&n?r.push(n[4],n[5],n[1],n[2]):r=null;return r},getLinearTickPositions:function(e,t,n){for(var r,t=_(K(t/e)e),n=_(Q(n/e)e),i=[];t<=n;){i.push(t);t=_(t+e);if(t===r)break;r=t}return i},getLogTickPositions:function(e,t,n,r){var i=this.options,s=this.len,o=[];if(!r)this._minorAutoInterval=null;if(e>=.5)e=J(e),o=this.getLinearTickPositions(e,t,n);else if(e>=.08)for(var s=K(t),f,l,c,h,d,i=e>.3?[1,2,4]:e>.15?[1,2,4,6,8]:[1,2,3,4,5,6,7,8,9];s<n+1&&!d;s++){l=i.length;for(f=0;f<l&&!d;f++)c=u(a(s)i[f]),c>t&&(!r\|\|h<=n)&&o.push(h),h>n&&(d=!0),h=c}else if(t=a(t),n=a(n),e=i[r?"minorTickInterval":"tickInterval"],e=p(e==="auto"?null:e,this._minorAutoInterval,(n-t)(i.tickPixelInterval/(r?5:1))/((r?s/this.tickPositions.length:s)\|\|1)),e=S(e,null,E(e)),o=un(this.getLinearTickPositions(e,t,n),u),!r)this._minorAutoInterval=e/5;if(!r)this.tickInterval=e;return o},getMinorTickPositions:function(){var e=this.options,t=this.tickPositions,n=this.minorTickInterval,r=[],i;if(this.isLog){i=t.length;for(e=1;e<i;e++)r=r.concat(this.getLogTickPositions(n,t[e-1],t[e],!0))}else if(this.isDatetimeAxis&&e.minorTickInterval==="auto")r=r.concat(T(x(n),this.min,this.max,e.startOfWeek)),r[0]<this.min&&r.shift();else for(t=this.min+(t[0]-this.min)%n;t<=this.max;t+=n)r.push(t);return r},adjustForMinRange:function(){var e=this.options,t=this.min,n=this.max,r,i=this.dataMax-this.dataMin>=this.minRange,s,o,u,a,f;if(this.isXAxis&&this.minRange===W&&!this.isLog)l(e.min)\|\|l(e.max)?this.minRange=null:(rn(this.series,function(e){a=e.xData;for(o=f=e.xIncrement?1:a.length-1;o>0;o--)if(u=a[o]-a[o-1],s===W\|\|u<s)s=u}),this.minRange=Y(s5,this.dataMax-this.dataMin));if(n-t<this.minRange){var c=this.minRange;r=(c-n+t)/2;r=[t-r,p(e.min,t-r)];if(i)r[2]=this.dataMin;t=L(r);n=[t+c,p(e.max,t+c)];if(i)n[2]=this.dataMax;n=k(n);n-t<c&&(r[0]=n-c,r[1]=p(e.min,n-c),t=L(r))}this.min=t;this.max=n},setAxisTranslation:function(e){var t=this.max-this.min,n=0,i,s=0,o=0,u=this.linkedParent,a=this.transA;if(this.isXAxis)u?(s=u.minPointOffset,o=u.pointRangePadding):rn(this.series,function(e){var u=e.pointRange,a=e.options.pointPlacement,f=e.closestPointRange;u>t&&(u=0);n=G(n,u);s=G(s,r(a)?0:u/2);o=G(o,a==="on"?0:u);!e.noSharedTooltip&&l(f)&&(i=l(i)?Y(i,f):f)}),u=this.ordinalSlope&&i?this.ordinalSlope/i:1,this.minPointOffset=s=u,this.pointRangePadding=o=u,this.pointRange=Y(n,t),this.closestPointRange=i;if(e)this.oldTransA=a;this.translationSlope=this.transA=a=this.len/(t+o\|\|1);this.transB=this.horiz?this.left:this.bottom;this.minPixelPadding=as},setTickPositions:function(e){var t=this,n=t.chart,r=t.options,i=t.isLog,s=t.isDatetimeAxis,o=t.isXAxis,a=t.isLinked,f=t.options.tickPositioner,c=r.maxPadding,h=r.minPadding,d=r.tickInterval,v=r.minTickInterval,m=r.tickPixelInterval,g=t.categories;a?(t.linkedParent=n[o?"xAxis":"yAxis"][r.linkedTo],n=t.linkedParent.getExtremes(),t.min=p(n.min,n.dataMin),t.max=p(n.max,n.dataMax),r.type!==t.linkedParent.options.type&&M(11,1)):(t.min=p(t.userMin,r.min,t.dataMin),t.max=p(t.userMax,r.max,t.dataMax));if(i)!e&&Y(t.min,p(t.dataMin,t.min))<=0&&M(10,1),t.min=_(u(t.min)),t.max=_(u(t.max));if(t.range&&(t.userMin=t.min=G(t.min,t.max-t.range),t.userMax=t.max,e))t.range=null;t.beforePadding&&t.beforePadding();t.adjustForMinRange();if(!g&&!t.usePercentage&&!a&&l(t.min)&&l(t.max)&&(n=t.max-t.min)){if(!l(r.min)&&!l(t.userMin)&&h&&(t.dataMin<0\|\|!t.ignoreMinPadding))t.min-=nh;if(!l(r.max)&&!l(t.userMax)&&c&&(t.dataMax>0\|\|!t.ignoreMaxPadding))t.max+=nc}t.tickInterval=t.min===t.max\|\|t.min===void 0\|\|t.max===void 0?1:a&&!d&&m===t.linkedParent.options.tickPixelInterval?t.linkedParent.tickInterval:p(d,g?1:(t.max-t.min)m/(t.len\|\|1));o&&!e&&rn(t.series,function(e){e.processData(t.min!==t.oldMin\|\|t.max!==t.oldMax)});t.setAxisTranslation(!0);t.beforeSetTickPositions&&t.beforeSetTickPositions();if(t.postProcessTickInterval)t.tickInterval=t.postProcessTickInterval(t.tickInterval);if(t.pointRange)t.tickInterval=G(t.pointRange,t.tickInterval);if(!d&&t.tickInterval<v)t.tickInterval=v;if(!s&&!i&&!d)t.tickInterval=S(t.tickInterval,null,E(t.tickInterval),r);t.minorTickInterval=r.minorTickInterval==="auto"&&t.tickInterval?t.tickInterval/5:r.minorTickInterval;t.tickPositions=e=r.tickPositions?[].concat(r.tickPositions):f&&f.apply(t,[t.min,t.max]);if(!e)e=s?(t.getNonLinearTimeTicks\|\|T)(x(t.tickInterval,r.units),t.min,t.max,r.startOfWeek,t.ordinalPositions,t.closestPointRange,!0):i?t.getLogTickPositions(t.tickInterval,t.min,t.max):t.getLinearTickPositions(t.tickInterval,t.min,t.max),t.tickPositions=e;if(!a)i=e[0],s=e[e.length-1],a=t.minPointOffset\|\|0,r.startOnTick?t.min=i:t.min-a>i&&e.shift(),r.endOnTick?t.max=s:t.max+a<s&&e.pop(),e.length===1&&(t.min-=.001,t.max+=.001)},setMaxTicks:function(){var e=this.chart,t=e.maxTicks\|\|{},n=this.tickPositions,r=this._maxTicksKey=[this.xOrY,this.pos,this.len].join("-");if(!this.isLinked&&!this.isDatetimeAxis&&n&&n.length>(t[r]\|\|0)&&this.options.alignTicks!==!1)t[r]=n.length;e.maxTicks=t},adjustTickAmount:function(){var e=this._maxTicksKey,t=this.tickPositions,n=this.chart.maxTicks;if(n&&n[e]&&!this.isDatetimeAxis&&!this.categories&&!this.isLinked&&this.options.alignTicks!==!1){var r=this.tickAmount,i=t.length;this.tickAmount=e=n[e];if(i<e){for(;t.length<e;)t.push(_(t[t.length-1]+this.tickInterval));this.transA=(i-1)/(e-1);this.max=t[t.length-1]}if(l(r)&&e!==r)this.isDirty=!0}},setScale:function(){var e=this.stacks,t,n,r,i;this.oldMin=this.min;this.oldMax=this.max;this.oldAxisLength=this.len;this.setAxisSize();i=this.len!==this.oldAxisLength;rn(this.series,function(e){if(e.isDirtyData\|\|e.isDirty\|\|e.xAxis.isDirty)r=!0});if(i\|\|r\|\|this.isLinked\|\|this.forceRedraw\|\|this.userMin!==this.oldUserMin\|\|this.userMax!==this.oldUserMax){if(!this.isXAxis)for(t in e)for(n in e[t])e[t][n].total=null;this.forceRedraw=!1;this.getSeriesExtremes();this.setTickPositions();this.oldUserMin=this.userMin;this.oldUserMax=this.userMax;if(!this.isDirty)this.isDirty=i\|\|this.min!==this.oldMin\|\|this.max!==this.oldMax}else if(!this.isXAxis){if(this.oldStacks)e=this.stacks=this.oldStacks;for(t in e)for(n in e[t])e[t][n].cum=e[t][n].total}this.setMaxTicks()},setExtremes:function(t,n,r,i,s){var o=this,u=o.chart,r=p(r,!0),s=e(s,{min:t,max:n});ln(o,"setExtremes",s,function(){o.userMin=t;o.userMax=n;o.isDirtyExtremes=!0;r&&u.redraw(i)})},zoom:function(e,t){this.allowZoomOutside\|\|(l(this.dataMin)&&e<=this.dataMin&&(e=W),l(this.dataMax)&&t>=this.dataMax&&(t=W));this.displayBtn=e!==W\|\|t!==W;this.setExtremes(e,t,!1,W,{trigger:"zoom"});return!0},setAxisSize:function(){var e=this.chart,t=this.options,n=t.offsetLeft\|\|0,r=t.offsetRight\|\|0,i=this.horiz,s,o;this.left=o=p(t.left,e.plotLeft+n);this.top=s=p(t.top,e.plotTop);this.width=n=p(t.width,e.plotWidth-n+r);this.height=t=p(t.height,e.plotHeight);this.bottom=e.chartHeight-t-s;this.right=e.chartWidth-n-o;this.len=G(i?n:t,0);this.pos=i?o:s},getExtremes:function(){var e=this.isLog;return{min:e?_(a(this.min)):this.min,max:e?_(a(this.max)):this.max,dataMin:this.dataMin,dataMax:this.dataMax,userMin:this.userMin,userMax:this.userMax}},getThreshold:function(e){var t=this.isLog,n=t?a(this.min):this.min,t=t?a(this.max):this.max;n>e\|\|e===null?e=n:t<e&&(e=t);return this.translate(e,0,1,0,1)},addPlotBand:function(e){this.addPlotBandOrLine(e,"plotBands")},addPlotLine:function(e){this.addPlotBandOrLine(e,"plotLines")},addPlotBandOrLine:function(e,t){var n=(new j(this,e)).render(),r=this.userOptions;t&&(r[t]=r[t]\|\|[],r[t].push(e));this.plotLinesAndBands.push(n);return n},autoLabelAlign:function(e){e=(p(e,0)-this.side90+720)%360;return e>15&&e<165?"right":e>195&&e<345?"left":"center"},getOffset:function(){var e=this,t=e.chart,n=t.renderer,r=e.options,i=e.tickPositions,s=e.ticks,o=e.horiz,u=e.side,a=t.inverted?[1,0,3,2][u]:u,f,c=0,h,d=0,v=r.title,m=r.labels,g=0,y=t.axisOffset,b=t.clipOffset,w=[-1,1,1,-1][u],E,S=1,x=p(m.maxStaggerLines,5),T,N,C,k;e.hasData=f=e.hasVisibleSeries\|\|l(e.min)&&l(e.max)&&!!i;e.showAxis=t=f\|\|p(r.showEmpty,!0);e.staggerLines=e.horiz&&m.staggerLines;if(!e.axisGroup)e.gridGroup=n.g("grid").attr({zIndex:r.gridZIndex\|\|1}).add(),e.axisGroup=n.g("axis").attr({zIndex:r.zIndex\|\|2}).add(),e.labelGroup=n.g("axis-labels").attr({zIndex:m.zIndex\|\|7}).add();if(f\|\|e.isLinked){e.labelAlign=p(m.align\|\|e.autoLabelAlign(m.rotation));rn(i,function(t){s[t]?s[t].addLabel():s[t]=new B(e,t)});if(e.horiz&&!e.staggerLines&&x&&!m.rotation){for(E=e.reversed?[].concat(i).reverse():i;S<x;){f=[];T=!1;for(m=0;m<E.length;m++)N=E[m],C=(C=s[N].label&&s[N].label.bBox)?C.width:0,k=m%S,C&&(N=e.translate(N),f[k]!==W&&N<f[k]&&(T=!0),f[k]=N+C);if(T)S++;else break}if(S>1)e.staggerLines=S}rn(i,function(t){if(u===0\|\|u===2\|\|{1:"left",3:"right"}[u]===e.labelAlign)g=G(s[t].getLabelSize(),g)});if(e.staggerLines)g=e.staggerLines,e.labelOffset=g}else for(E in s)s[E].destroy(),delete s[E];if(v&&v.text&&v.enabled!==!1){if(!e.axisTitle)e.axisTitle=n.text(v.text,0,0,v.useHTML).attr({zIndex:7,rotation:v.rotation\|\|0,align:v.textAlign\|\|{low:"left",middle:"center",high:"right"}[v.align]}).css(v.style).add(e.axisGroup),e.axisTitle.isNew=!0;if(t)c=e.axisTitle.getBBox()[o?"height":"width"],d=p(v.margin,o?5:10),h=v.offset;e.axisTitle[t?"show":"hide"]()}e.offset=wp(r.offset,y[u]);e.axisTitleMargin=p(h,g+d+(u!==2&&g&&wr.labels[o?"y":"x"]));y[u]=G(y[u],e.axisTitleMargin+c+we.offset);b[a]=G(b[a],r.lineWidth)},getLinePath:function(e){var t=this.chart,n=this.opposite,r=this.offset,i=this.horiz,s=this.left+(n?this.width:0)+r;this.lineTop=r=t.chartHeight-this.bottom-(n?this.height:0)+r;n\|\|(e=-1);
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	128 return t.renderer.crispLine(["M",i?this.left:s,i?r:this.top,"L",i?t.chartWidth-this.right:s,i?r:t.chartHeight-this.bottom],e)},getTitlePosition:function(){var e=this.horiz,t=this.left,r=this.top,i=this.len,s=this.options.title,o=e?t:r,u=this.opposite,a=this.offset,f=n(s.style.fontSize\|\|12),i={low:o+(e?0:i),middle:o+i/2,high:o+(e?i:0)}[s.align],t=(e?r+this.height:t)+(e?1:-1)(u?-1:1)this.axisTitleMargin+(this.side===2?f:0);return{x:e?i:t+(u?this.width:0)+a+(s.x\|\|0),y:e?t-(u?this.height:0)+a:i+(s.y\|\|0)}},render:function(){var e=this,t=e.chart,n=t.renderer,r=e.options,i=e.isLog,s=e.isLinked,o=e.tickPositions,u=e.axisTitle,f=e.stacks,c=e.ticks,h=e.minorTicks,p=e.alternateBands,d=r.stackLabels,v=r.alternateGridColor,m=e.tickmarkOffset,g=r.lineWidth,y,b=t.hasRendered&&l(e.oldMin)&&!isNaN(e.oldMin);y=e.hasData;var w=e.showAxis,E,S;rn([c,h,p],function(e){for(var t in e)e[t].isActive=!1});if(y\|\|s)if(e.minorTickInterval&&!e.categories&&rn(e.getMinorTickPositions(),function(t){h[t]\|\|(h[t]=new B(e,t,"minor"));b&&h[t].isNew&&h[t].render(null,!0);h[t].render(null,!1,1)}),o.length&&(rn(o.slice(1).concat([o[0]]),function(t,n){n=n===o.length-1?0:n+1;if(!s\|\|t>=e.min&&t<=e.max)c[t]\|\|(c[t]=new B(e,t)),b&&c[t].isNew&&c[t].render(n,!0),c[t].render(n,!1,1)}),m&&e.min===0&&(c[-1]\|\|(c[-1]=new B(e,-1,null,!0)),c[-1].render(-1))),v&&rn(o,function(t,n){if(n%2===0&&t<e.max)p[t]\|\|(p[t]=new 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t=this.chart,n=t.hoverSeries,r=t.hoverPoint,i=t.tooltip,t=i&&i.shared?t.hoverPoints:r;(e=e&&i&&t)&&h(t)[0].plotX===W&&(e=!1);if(e)i.refresh(t);else{if(r)r.onMouseOut();if(n)n.onMouseOut();i&&(i.hide(),i.hideCrosshairs());this.hoverX=null}},scaleGroups:function(e,t){var n=this.chart,r;rn(n.series,function(i){r=e\|\|i.getPlotBox();i.xAxis&&i.xAxis.zoomEnabled&&(i.group.attr(r),i.markerGroup&&(i.markerGroup.attr(r),i.markerGroup.clip(t?n.clipRect:null)),i.dataLabelsGroup&&i.dataLabelsGroup.attr(r))});n.clipRect.attr(t\|\|n.clipBox)},pinchTranslateDirection:function(e,t,n,r,i,s,o){var u=this.chart,a=e?"x":"y",f=e?"X":"Y",l="chart"+f,c=e?"width":"height",h=u["plot"+(e?"Left":"Top")],p,d,v=1,m=u.inverted,g=u.bounds[e?"h":"v"],y=t.length===1,b=t[0][l],w=n[0][l],E=!y&&t[1][l],S=!y&&n[1][l],x,n=function(){!y&&Z(b-E)>20&&(v=Z(w-S)/Z(b-E));d=(h-w)/v+b;p=u["plot"+(e?"Width":"Height")]/v};n();t=d;t<g.min?(t=g.min,x=!0):t+p>g.max&&(t=g.max-p,x=!0);x?(w-=.8(w-o[a][0]),y\|\|(S-=.8(S-o[a][1])),n()):o[a]=[w,S];m\|\|(s[a]=d-h,s[c]=p);s=m?1/v:v;i[c]=p;i[a]=t;r[m?e?"scaleY":"scaleX":"scale"+f]=v;r["translate"+f]=sh+(w-sb)},pinch:function(t){var n=this,r=n.chart,i=n.pinchDown,s=r.tooltip&&r.tooltip.options.followTouchMove,o=t.touches,u=o.length,a=n.lastValidTouch,f=n.zoomHor\|\|n.pinchHor,l=n.zoomVert\|\|n.pinchVert,c=f\|\|l,h=n.selectionMarker,p={},d={};t.type==="touchstart"&&(s\|\|c)&&t.preventDefault();un(o,function(e){return 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t=this.chart,n=t.options.chart,r=e.chartX,e=e.chartY,i=this.zoomHor,s=this.zoomVert,o=t.plotLeft,u=t.plotTop,a=t.plotWidth,f=t.plotHeight,l,c=this.mouseDownX,h=this.mouseDownY;r<o?r=o:r>o+a&&(r=o+a);e<u?e=u:e>u+f&&(e=u+f);this.hasDragged=Math.sqrt(Math.pow(c-r,2)+Math.pow(h-e,2));if(this.hasDragged>10){l=t.isInsidePlot(c-o,h-u);if(t.hasCartesianSeries&&(this.zoomX\|\|this.zoomY)&&l&&!this.selectionMarker)this.selectionMarker=t.renderer.rect(o,u,i?1:a,s?1:f,0).attr({fill:n.selectionMarkerFill\|\|"rgba(69,114,167,0.25)",zIndex:7}).add();this.selectionMarker&&i&&(i=r-c,this.selectionMarker.attr({width:Z(i),x:(i>0?0:i)+c}));this.selectionMarker&&s&&(i=e-h,this.selectionMarker.attr({height:Z(i),y:(i>0?0:i)+h}));l&&!this.selectionMarker&&n.panning&&t.pan(r)}},drop:function(t){var n=this.chart,r=this.hasPinched;if(this.selectionMarker){var i={xAxis:[],yAxis:[],originalEvent:t.originalEvent\|\|t},s=this.selectionMarker,o=s.x,u=s.y,a;if(this.hasDragged\|\|r)rn(n.axes,function(e){if(e.zoomEnabled){var t=e.horiz,n=e.toValue(t?o:u),t=e.toValue(t?o+s.width:u+s.height);!isNaN(n)&&!isNaN(t)&&(i[e.xOrY+"Axis"].push({axis:e,min:Y(n,t),max:G(n,t)}),a=!0)}}),a&&ln(n,"selection",i,function(t){n.zoom(e(t,r?{animation:!1}:null))});this.selectionMarker=this.selectionMarker.destroy();r&&this.scaleGroups()}if(n)d(n.container,{cursor:n._cursor}),n.cancelClick=this.hasDragged>10,n.mouseIsDown=this.hasDragged=this.hasPinched=!1,this.pinchDown=[]},onContainerMouseDown:function(e){e=this.normalize(e);e.preventDefault&&e.preventDefault();this.dragStart(e)},onDocumentMouseUp:function(e){this.drop(e)},onDocumentMouseMove:function(e){var t=this.chart,n=this.chartPosition,r=t.hoverSeries,e=cn(e);n&&r&&r.isCartesian&&!t.isInsidePlot(e.pageX-n.left-t.plotLeft,e.pageY-n.top-t.plotTop)&&this.reset()},onContainerMouseLeave:function(){this.reset();this.chartPosition=null},onContainerMouseMove:function(e){var t=this.chart,e=this.normalize(e);e.returnValue=!1;t.mouseIsDown==="mousedown"&&this.drag(e);t.isInsidePlot(e.chartX-t.plotLeft,e.chartY-t.plotTop)&&!t.openMenu&&this.runPointActions(e)},inClass:function(e,t){for(var n;e;){if(n=c(e,"class"))if(n.indexOf(t)!==-1)return!0;else if(n.indexOf("highcharts-container")!==-1)return!1;e=e.parentNode}},onTrackerMouseOut:function(e){var t=this.chart.hoverSeries;if(t&&!t.options.stickyTracking&&!this.inClass(e.toElement\|\|e.relatedTarget,"highcharts-tooltip"))t.onMouseOut()},onContainerClick:function(t){var n=this.chart,r=n.hoverPoint,i=n.plotLeft,s=n.plotTop,o=n.inverted,u,a,f,t=this.normalize(t);t.cancelBubble=!0;if(!n.cancelClick)r&&this.inClass(t.target,"highcharts-tracker")?(u=this.chartPosition,a=r.plotX,f=r.plotY,e(r,{pageX:u.left+i+(o?n.plotWidth-f:a),pageY:u.top+s+(o?n.plotHeight-a:f)}),ln(r.series,"click",e(t,{point:r})),n.hoverPoint&&r.firePointEvent("click",t)):(e(t,this.getCoordinates(t)),n.isInsidePlot(t.chartX-i,t.chartY-s)&&ln(n,"click",t))},onContainerTouchStart:function(e){var t=this.chart;e.touches.length===1?(e=this.normalize(e),t.isInsidePlot(e.chartX-t.plotLeft,e.chartY-t.plotTop)?(this.runPointActions(e),this.pinch(e)):this.reset()):e.touches.length===2&&this.pinch(e)},onContainerTouchMove:function(e){(e.touches.length===1\|\|e.touches.length===2)&&this.pinch(e)},onDocumentTouchEnd:function(e){this.drop(e)},setDOMEvents:function(){var e=this,t=e.chart.container,n;this._events=n=[[t,"onmousedown","onContainerMouseDown"],[t,"onmousemove","onContainerMouseMove"],[t,"onclick","onContainerClick"],[t,"mouseleave","onContainerMouseLeave"],[X,"mousemove","onDocumentMouseMove"],[X,"mouseup","onDocumentMouseUp"]];mt&&n.push([t,"ontouchstart","onContainerTouchStart"],[t,"ontouchmove","onContainerTouchMove"],[X,"touchend","onDocumentTouchEnd"]);rn(n,function(t){e["_"+t[2]]=function(n){e[t[2]](n)};t[1].indexOf("on")===0?t[0][t[1]]=e["_"+t[2]]:an(t[0],t[1],e["_"+t[2]])})},destroy:function(){var e=this;rn(e._events,function(t){t[1].indexOf("on")===0?t[0][t[1]]=null:fn(t[0],t[1],e["_"+t[2]])});delete e._events;clearInterval(e.tooltipTimeout)}};U.prototype={init:function(e,r){var i=this,s=r.itemStyle,o=p(r.padding,8),u=r.itemMarginTop\|\|0;this.options=r;if(r.enabled)i.baseline=n(s.fontSize)+3+u,i.itemStyle=s,i.itemHiddenStyle=t(s,r.itemHiddenStyle),i.itemMarginTop=u,i.padding=o,i.initialItemX=o,i.initialItemY=o-5,i.maxItemWidth=0,i.chart=e,i.itemHeight=0,i.lastLineHeight=0,i.render(),an(i.chart,"endResize",function(){i.positionCheckboxes()})},colorizeItem:function(e,t){var n=this.options,r=e.legendItem,i=e.legendLine,s=e.legendSymbol,o=this.itemHiddenStyle.color,n=t?n.itemStyle.color:o,u=t?e.color:o,o=e.options&&e.options.marker,a={stroke:u,fill:u},f;r&&r.css({fill:n,color:n});i&&i.attr({stroke:u});if(s){if(o&&s.isMarker)for(f in o=e.convertAttribs(o),o)r=o[f],r!==W&&(a[f]=r);s.attr(a)}},positionItem:function(e){var t=this.options,n=t.symbolPadding,t=!t.rtl,r=e._legendItemPos,i=r[0],r=r[1],s=e.checkbox;e.legendGroup&&e.legendGroup.translate(t?i:this.legendWidth-i-2n-4,r);if(s)s.x=i,s.y=r},destroyItem:function(e){var t=e.checkbox;rn(["legendItem","legendLine","legendSymbol","legendGroup"],function(t){e[t]&&(e[t]=e[t].destroy())});t&&O(e.checkbox)},destroy:function(){var e=this.group,t=this.box;if(t)this.box=t.destroy();if(e)this.group=e.destroy()},positionCheckboxes:function(e){var t=this.group.alignAttr,n,r=this.clipHeight\|\|this.legendHeight;if(t)n=t.translateY,rn(this.allItems,function(i){var s=i.checkbox,o;s&&(o=n+s.y+(e\|\|0)+3,d(s,{left:t.translateX+i.legendItemWidth+s.x-20+"px",top:o+"px",display:o>n-6&&o<n+r-6?"":Lt}))})},renderTitle:function(){var e=this.padding,t=this.options.title,n=0;if(t.text){if(!this.title)this.title=this.chart.renderer.label(t.text,e-3,e-4,null,null,null,null,null,"legend-title").attr({zIndex:1}).css(t.style).add(this.group);e=this.title.getBBox();n=e.height;this.offsetWidth=e.width;this.contentGroup.attr({translateY:n})}this.titleHeight=n},renderItem:function(e){var n;var r=this,i=r.chart,s=i.renderer,o=r.options,u=o.layout==="horizontal",a=o.symbolWidth,f=o.symbolPadding,l=r.itemStyle,c=r.itemHiddenStyle,h=r.padding,d=u?p(o.itemDistance,8):0,m=!o.rtl,g=o.width,y=o.itemMarginBottom\|\|0,b=r.itemMarginTop,E=r.initialItemX,S=e.legendItem,x=e.series\|\|e,T=x.options,N=T.showCheckbox,C=o.useHTML;if(!S&&(e.legendGroup=s.g("legend-item").attr({zIndex:1}).add(r.scrollGroup),x.drawLegendSymbol(r,e),e.legendItem=S=s.text(o.labelFormat?w(o.labelFormat,e):o.labelFormatter.call(e),m?a+f:-f,r.baseline,C).css(t(e.visible?l:c)).attr({align:m?"left":"right",zIndex:2}).add(e.legendGroup),(C?S:e.legendGroup).on("mouseover",function(){e.setState("hover");S.css(r.options.itemHoverStyle)}).on("mouseout",function(){S.css(e.visible?l:c);e.setState()}).on("click",function(t){var n=function(){e.setVisible()},t={browserEvent:t};e.firePointEvent?e.firePointEvent("legendItemClick",t,n):ln(e,"legendItemClick",t,n)}),r.colorizeItem(e,e.visible),T&&N))e.checkbox=v("input",{type:"checkbox",checked:e.selected,defaultChecked:e.selected},o.itemCheckboxStyle,i.container),an(e.checkbox,"click",function(t){ln(e,"checkboxClick",{checked:t.target.checked},function(){e.select()})});s=S.getBBox();n=e.legendItemWidth=o.itemWidth\|\|a+f+s.width+d+(N?20:0),o=n;r.itemHeight=a=s.height;if(u&&r.itemX-E+o>(g\|\|i.chartWidth-2h-E))r.itemX=E,r.itemY+=b+r.lastLineHeight+y,r.lastLineHeight=0;r.maxItemWidth=G(r.maxItemWidth,o);r.lastItemY=b+r.itemY+y;r.lastLineHeight=G(a,r.lastLineHeight);e._legendItemPos=[r.itemX,r.itemY];u?r.itemX+=o:(r.itemY+=b+a+y,r.lastLineHeight=a);r.offsetWidth=g\|\|G((u?r.itemX-E-d:o)+h,r.offsetWidth)},render:function(){var t=this,n=t.chart,r=n.renderer,i=t.group,s,o,u,a,f=t.box,c=t.options,h=t.padding,p=c.borderWidth,d=c.backgroundColor;t.itemX=t.initialItemX;t.itemY=t.initialItemY;t.offsetWidth=0;t.lastItemY=0;if(!i)t.group=i=r.g("legend").attr({zIndex:7}).add(),t.contentGroup=r.g().attr({zIndex:1}).add(i),t.scrollGroup=r.g().add(t.contentGroup);t.renderTitle();s=[];rn(n.series,function(e){var t=e.options;t.showInLegend&&!l(t.linkedTo)&&(s=s.concat(e.legendItems\|\|(t.legendType==="point"?e.data:e)))});C(s,function(e,t){return(e.options&&e.options.legendIndex\|\|0)-(t.options&&t.options.legendIndex\|\|0)});c.reversed&&s.reverse();t.allItems=s;t.display=o=!!s.length;rn(s,function(e){t.renderItem(e)});u=c.width\|\|t.offsetWidth;a=t.lastItemY+t.lastLineHeight+t.titleHeight;a=t.handleOverflow(a);if(p\|\|d){u+=h;a+=h;if(f){if(u>0&&a>0)f[f.isNew?"attr":"animate"](f.crisp(null,null,null,u,a)),f.isNew=!1}else t.box=f=r.rect(0,0,u,a,c.borderRadius,p\|\|0).attr({stroke:c.borderColor,"stroke-width":p\|\|0,fill:d\|\|Lt}).add(i).shadow(c.shadow),f.isNew=!0;f[o?"show":"hide"]()}t.legendWidth=u;t.legendHeight=a;rn(s,function(e){t.positionItem(e)});o&&i.align(e({width:u,height:a},c),!0,"spacingBox");n.isResizing\|\|this.positionCheckboxes()},handleOverflow:function(e){var t=this,n=this.chart,r=n.renderer,i=this.options,s=i.y,s=n.spacingBox.height+(i.verticalAlign==="top"?-s:s)-this.padding,o=i.maxHeight,u=this.clipRect,a=i.navigation,f=p(a.animation,!0),l=a.arrowSize\|\|12,c=this.nav;i.layout==="horizontal"&&(s/=2);o&&(s=Y(s,o));if(e>s&&!i.useHTML){this.clipHeight=n=s-20-this.titleHeight;this.pageCount=Q(e/n);this.currentPage=p(this.currentPage,1);this.fullHeight=e;if(!u)u=t.clipRect=r.clipRect(0,0,9999,0),t.contentGroup.clip(u);u.attr({height:n});if(!c)this.nav=c=r.g().attr({zIndex:1}).add(this.group),this.up=r.symbol("triangle",0,0,l,l).on("click",function(){t.scroll(-1,f)}).add(c),this.pager=r.text("",15,10).css(a.style).add(c),this.down=r.symbol("triangle-down",0,0,l,l).on("click",function(){t.scroll(1,f)}).add(c);t.scroll(0);e=s}else if(c)u.attr({height:n.chartHeight}),c.hide(),this.scrollGroup.attr({translateY:1}),this.clipHeight=0;return e},scroll:function(e,t){var n=this.pageCount,r=this.currentPage+e,i=this.clipHeight,s=this.options.navigation,o=s.activeColor,u=s.inactiveColor,s=this.pager,a=this.padding;r>n&&(r=n);if(r>0)t!==W&&D(t,this.chart),this.nav.attr({translateX:a,translateY:i+7+this.titleHeight,visibility:"visible"}),this.up.attr({fill:r===1?u:o}).css({cursor:r===1?"default":"pointer"}),s.attr({text:r+"/"+this.pageCount}),this.down.attr({x:18+this.pager.getBBox().width,fill:r===n?u:o}).css({cursor:r===n?"default":"pointer"}),i=-Y(i*(r-1),this.fullHeight-i+a)+1,this.scrollGroup.animate({translateY:i}),s.attr({text:r+"/"+n}),this.currentPage=r,this.positionCheckboxes(i)}};z.prototype={init:function(e,n){var r,s=e.series;e.series=null;r=t(wt,e);r.series=e.series=s;var 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I(this,t(e,{index:this[s].length,isX:n}));o[s]=h(o[s]\|\|{});o[s].push(e);p(r,!0)&&this.redraw(i)},isInsidePlot:function(e,t,n){var r=n?t:e,e=n?e:t;return r>=0&&r<=this.plotWidth&&e>=0&&e<=this.plotHeight},adjustTickAmounts:function(){this.options.chart.alignTicks!==!1&&rn(this.axes,function(e){e.adjustTickAmount()});this.maxTicks=null},redraw:function(e){var t=this.axes,n=this.series,r=this.pointer,i=this.legend,s=this.isDirtyLegend,o,u,a=this.isDirtyBox,f=n.length,l=f,c=this.renderer,h=c.isHidden(),p=[];D(e,this);h&&this.cloneRenderTo();for(this.layOutTitles();l--;)if(e=n[l],e.options.stacking&&(o=!0,e.isDirty)){u=!0;break}if(u)for(l=f;l--;)if(e=n[l],e.options.stacking)e.isDirty=!0;rn(n,function(e){e.isDirty&&e.options.legendType==="point"&&(s=!0)});if(s&&i.options.enabled)i.render(),this.isDirtyLegend=!1;o&&this.getStacks();if(this.hasCartesianSeries){if(!this.isResizing)this.maxTicks=null,rn(t,function(e){e.setScale()});this.adjustTickAmounts();this.getMargins();rn(t,function(e){if(e.isDirtyExtremes)e.isDirtyExtremes=!1,p.push(function(){ln(e,"afterSetExtremes",e.getExtremes())});if(e.isDirty\|\|a\|\|o)e.redraw(),a=!0})}a&&this.drawChartBox();rn(n,function(e){e.isDirty&&e.visible&&(!e.isCartesian\|\|e.xAxis)&&e.redraw()});r&&r.reset&&r.reset(!0);c.draw();ln(this,"redraw");h&&this.cloneRenderTo(!0);rn(p,function(e){e.call()})},showLoading:function(t){var n=this.options,r=this.loadingDiv,i=n.loading;if(!r)this.loadingDiv=r=v(kt,{className:"highcharts-loading"},e(i.style,{zIndex:10,display:Lt}),this.container),this.loadingSpan=v("span",null,i.labelStyle,r);this.loadingSpan.innerHTML=t\|\|n.lang.loading;if(!this.loadingShown)d(r,{opacity:0,display:"",left:this.plotLeft+"px",top:this.plotTop+"px",width:this.plotWidth+"px",height:this.plotHeight+"px"}),hn(r,{opacity:i.style.opacity},{duration:i.showDuration\|\|0}),this.loadingShown=!0},hideLoading:function(){var e=this.options,t=this.loadingDiv;t&&hn(t,{opacity:0},{duration:e.loading.hideDuration\|\|100,complete:function(){d(t,{display:Lt})}});this.loadingShown=!1},get:function(e){var t=this.axes,n=this.series,r,i;for(r=0;r<t.length;r++)if(t[r].options.id===e)return t[r];for(r=0;r<n.length;r++)if(n[r].options.id===e)return n[r];for(r=0;r<n.length;r++){i=n[r].points\|\|[];for(t=0;t<i.length;t++)if(i[t].id===e)return i[t]}return null},getAxes:function(){var e=this,t=this.options,n=t.xAxis=h(t.xAxis\|\|{}),t=t.yAxis=h(t.yAxis\|\|{});rn(n,function(e,t){e.index=t;e.isX=!0});rn(t,function(e,t){e.index=t});n=n.concat(t);rn(n,function(t){new I(e,t)});e.adjustTickAmounts()},getSelectedPoints:function(){var e=[];rn(this.series,function(t){e=e.concat(sn(t.points\|\|[],function(e){return e.selected}))});return e},getSelectedSeries:function(){return sn(this.series,function(e){return e.selected})},getStacks:function(){var e=this;rn(e.yAxis,function(e){if(e.stacks&&e.hasVisibleSeries)e.oldStacks=e.stacks});rn(e.series,function(t){if(t.options.stacking&&(t.visible===!0\|\|e.options.chart.ignoreHiddenSeries===!1))t.stackKey=t.type+p(t.options.stack,"")})},showResetZoom:function(){var e=this,t=wt.lang,n=e.options.chart.resetZoomButton,r=n.theme,i=r.states,s=n.relativeTo==="chart"?null:"plotBox";this.resetZoomButton=e.renderer.button(t.resetZoom,null,null,function(){e.zoomOut()},r,i&&i.hover).attr({align:n.position.align,title:t.resetZoomTitle}).add().align(n.position,!1,s)},zoomOut:function(){var e=this;ln(e,"selection",{resetSelection:!0},function(){e.zoom()})},zoom:function(e){var t,n=this.pointer,r=!1,s;!e\|\|e.resetSelection?rn(this.axes,function(e){t=e.zoom()}):rn(e.xAxis.concat(e.yAxis),function(e){var i=e.axis,s=i.isXAxis;if(n[s?"zoomX":"zoomY"]\|\|n[s?"pinchX":"pinchY"])t=i.zoom(e.min,e.max),i.displayBtn&&(r=!0)});s=this.resetZoomButton;if(r&&!s)this.showResetZoom();else if(!r&&i(s))this.resetZoomButton=s.destroy();t&&this.redraw(p(this.options.chart.animation,e&&e.animation,this.pointCount<100))},pan:function(e){var t=this.xAxis[0],n=this.mouseDownX,r=t.pointRange/2,i=t.getExtremes(),s=t.translate(n-e,!0)+r,n=t.translate(n+this.plotWidth-e,!0)-r;(r=this.hoverPoints)&&rn(r,function(e){e.setState()});t.series.length&&s>Y(i.dataMin,i.min)&&n<G(i.dataMax,i.max)&&t.setExtremes(s,n,!0,!1,{trigger:"pan"});this.mouseDownX=e;d(this.container,{cursor:"move"})},setTitle:function(e,n){var r;var i=this,s=i.options,o;o=s.title=t(s.title,e);r=s.subtitle=t(s.subtitle,n),s=r;rn([["title",e,o],["subtitle",n,s]],function(e){var t=e[0],n=i[t],r=e[1],e=e[2];n&&r&&(i[t]=n=n.destroy());e&&e.text&&!n&&(i[t]=i.renderer.text(e.text,0,0,e.useHTML).attr({align:e.align,"class":"highcharts-"+t,zIndex:e.zIndex\|\|4}).css(e.style).add())});i.layOutTitles()},layOutTitles:function(){var t=0,n=this.title,r=this.subtitle,i=this.options,s=i.title,i=i.subtitle,o=this.spacingBox.width-44;if(n&&(n.css({width:(s.width\|\|o)+"px"}).align(e({y:15},s),!1,"spacingBox"),!s.floating&&!s.verticalAlign))t=n.getBBox().height,t>=18&&t<=25&&(t=15);r&&(r.css({width:(i.width\|\|o)+"px"}).align(e({y:t+s.margin},i),!1,"spacingBox"),!i.floating&&!i.verticalAlign&&(t=Q(t+r.getBBox().height)));this.titleOffset=t},getChartSize:function(){var e=this.options.chart,t=this.renderToClone\|\|this.renderTo;this.containerWidth=en(t,"width");this.containerHeight=en(t,"height");this.chartWidth=G(0,e.width\|\|this.containerWidth\|\|600);this.chartHeight=G(0,p(e.height,this.containerHeight>19?this.containerHeight:400))},cloneRenderTo:function(e){var t=this.renderToClone,n=this.container;e?t&&(this.renderTo.appendChild(n),O(t),delete this.renderToClone):(n&&n.parentNode===this.renderTo&&this.renderTo.removeChild(n),this.renderToClone=t=this.renderTo.cloneNode(0),d(t,{position:"absolute",top:"-9999px",display:"block"}),X.body.appendChild(t),n&&t.appendChild(n))},getContainer:function(){var t,i=this.options.chart,s,o,u;this.renderTo=t=i.renderTo;u="highcharts-"+yt++;if(r(t))this.renderTo=t=X.getElementById(t);t\|\|M(13,!0);s=n(c(t,"data-highcharts-chart"));!isNaN(s)&&Ct[s]&&Ct[s].destroy();c(t,"data-highcharts-chart",this.index);t.innerHTML="";t.offsetWidth\|\|this.cloneRenderTo();this.getChartSize();s=this.chartWidth;o=this.chartHeight;this.container=t=v(kt,{className:"highcharts-container"+(i.className?" "+i.className:""),id:u},e({position:"relative",overflow:"hidden",width:s+"px",height:o+"px",textAlign:"left",lineHeight:"normal",zIndex:0,"-webkit-tap-highlight-color":"rgba(0,0,0,0)"},i.style),this.renderToClone\|\|t);this._cursor=t.style.cursor;this.renderer=i.forExport?new mn(t,s,o,!0):new vt(t,s,o);dt&&this.renderer.create(this,t,s,o)},getMargins:function(){var e=this.options.chart,t=e.spacingTop,n=e.spacingRight,r=e.spacingBottom,e=e.spacingLeft,i,s=this.legend,o=this.optionsMarginTop,u=this.optionsMarginLeft,a=this.optionsMarginRight,f=this.optionsMarginBottom,c=this.options.legend,h=p(c.margin,10),d=c.x,v=c.y,m=c.align,g=c.verticalAlign,y=this.titleOffset;this.resetMargins();i=this.axisOffset;if(y&&!l(o))this.plotTop=G(this.plotTop,y+this.options.title.margin+t);if(s.display&&!c.floating)if(m==="right"){if(!l(a))this.marginRight=G(this.marginRight,s.legendWidth-d+h+n)}else if(m==="left"){if(!l(u))this.plotLeft=G(this.plotLeft,s.legendWidth+d+h+e)}else if(g==="top"){if(!l(o))this.plotTop=G(this.plotTop,s.legendHeight+v+h+t)}else if(g==="bottom"&&!l(f))this.marginBottom=G(this.marginBottom,s.legendHeight-v+h+r);this.extraBottomMargin&&(this.marginBottom+=this.extraBottomMargin);this.extraTopMargin&&(this.plotTop+=this.extraTopMargin);this.hasCartesianSeries&&rn(this.axes,function(e){e.getOffset()});l(u)\|\|(this.plotLeft+=i[3]);l(o)\|\|(this.plotTop+=i[0]);l(f)\|\|(this.marginBottom+=i[2]);l(a)\|\|(this.marginRight+=i[1]);this.setChartSize()},initReflow:function(){function e(e){var s=n.width\|\|en(r,"width"),o=n.height\|\|en(r,"height"),e=e?e.target:V;if(!t.hasUserSize&&s&&o&&(e===V\|\|e===X)){if(s!==t.containerWidth\|\|o!==t.containerHeight)clearTimeout(i),t.reflowTimeout=i=setTimeout(function(){if(t.container)t.setSize(s,o,!1),t.hasUserSize=null},100);t.containerWidth=s;t.containerHeight=o}}var t=this,n=t.options.chart,r=t.renderTo,i;an(V,"resize",e);an(t,"destroy",function(){fn(V,"resize",e)})},setSize:function(e,t,n){var r=this,i,s,o;r.isResizing+=1;o=function(){r&&ln(r,"endResize",null,function(){r.isResizing-=1})};D(n,r);r.oldChartHeight=r.chartHeight;r.oldChartWidth=r.chartWidth;if(l(e))r.chartWidth=i=G(0,J(e)),r.hasUserSize=!!i;if(l(t))r.chartHeight=s=G(0,J(t));d(r.container,{width:i+"px",height:s+"px"});r.setChartSize(!0);r.renderer.setSize(i,s,n);r.maxTicks=null;rn(r.axes,function(e){e.isDirty=!0;e.setScale()});rn(r.series,function(e){e.isDirty=!0});r.isDirtyLegend=!0;r.isDirtyBox=!0;r.getMargins();r.redraw(n);r.oldChartHeight=null;ln(r,"resize");St===!1?o():setTimeout(o,St&&St.duration\|\|500)},setChartSize:function(e){var t=this.inverted,n=this.renderer,r=this.chartWidth,i=this.chartHeight,s=this.options.chart,o=s.spacingTop,u=s.spacingRight,a=s.spacingBottom,f=s.spacingLeft,l=this.clipOffset,c,h,p,d;this.plotLeft=c=J(this.plotLeft);this.plotTop=h=J(this.plotTop);this.plotWidth=p=G(0,J(r-c-this.marginRight));this.plotHeight=d=G(0,J(i-h-this.marginBottom));this.plotSizeX=t?d:p;this.plotSizeY=t?p:d;this.plotBorderWidth=t=s.plotBorderWidth\|\|0;this.spacingBox=n.spacingBox={x:f,y:o,width:r-f-u,height:i-o-a};this.plotBox=n.plotBox={x:c,y:h,width:p,height:d};n=Q(G(t,l[3])/2);r=Q(G(t,l[0])/2);this.clipBox={x:n,y:r,width:K(this.plotSizeX-G(t,l[1])/2-n),height:K(this.plotSizeY-G(t,l[2])/2-r)};e\|\|rn(this.axes,function(e){e.setAxisSize();e.setAxisTranslation()})},resetMargins:function(){var e=this.options.chart,t=e.spacingRight,n=e.spacingBottom,r=e.spacingLeft;this.plotTop=p(this.optionsMarginTop,e.spacingTop);this.marginRight=p(this.optionsMarginRight,t);this.marginBottom=p(this.optionsMarginBottom,n);this.plotLeft=p(this.optionsMarginLeft,r);this.axisOffset=[0,0,0,0];
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	129 this.clipOffset=[0,0,0,0]},drawChartBox:function(){var e=this.options.chart,t=this.renderer,n=this.chartWidth,r=this.chartHeight,i=this.chartBackground,s=this.plotBackground,o=this.plotBorder,u=this.plotBGImage,a=e.borderWidth\|\|0,f=e.backgroundColor,l=e.plotBackgroundColor,c=e.plotBackgroundImage,h=e.plotBorderWidth\|\|0,p,d=this.plotLeft,v=this.plotTop,m=this.plotWidth,g=this.plotHeight,y=this.plotBox,b=this.clipRect,w=this.clipBox;p=a+(e.shadow?8:0);if(a\|\|f)if(i)i.animate(i.crisp(null,null,null,n-p,r-p));else{i={fill:f\|\|Lt};if(a)i.stroke=e.borderColor,i["stroke-width"]=a;this.chartBackground=t.rect(p/2,p/2,n-p,r-p,e.borderRadius,a).attr(i).add().shadow(e.shadow)}if(l)s?s.animate(y):this.plotBackground=t.rect(d,v,m,g,0).attr({fill:l}).add().shadow(e.plotShadow);if(c)u?u.animate(y):this.plotBGImage=t.image(c,d,v,m,g).add();b?b.animate({width:w.width,height:w.height}):this.clipRect=t.clipRect(w);if(h)o?o.animate(o.crisp(null,d,v,m,g)):this.plotBorder=t.rect(d,v,m,g,0,h).attr({stroke:e.plotBorderColor,"stroke-width":h,zIndex:1}).add();this.isDirtyBox=!1},propFromSeries:function(){var e=this,t=e.options.chart,n,r=e.options.series,i,s;rn(["inverted","angular","polar"],function(o){n=Gt[t.type\|\|t.defaultSeriesType];s=e[o]\|\|t[o]\|\|n&&n.prototype[o];for(i=r&&r.length;!s&&i--;)(n=Gt[r[i].type])&&n.prototype[o]&&(s=!0);e[o]=s})},render:function(){var t=this,r=t.axes,i=t.renderer,s=t.options,o=s.labels,u=s.credits,a;t.setTitle();t.legend=new U(t,s.legend);t.getStacks();rn(r,function(e){e.setScale()});t.getMargins();t.maxTicks=null;rn(r,function(e){e.setTickPositions(!0);e.setMaxTicks()});t.adjustTickAmounts();t.getMargins();t.drawChartBox();t.hasCartesianSeries&&rn(r,function(e){e.render()});if(!t.seriesGroup)t.seriesGroup=i.g("series-group").attr({zIndex:3}).add();rn(t.series,function(e){e.translate();e.setTooltipPoints();e.render()});o.items&&rn(o.items,function(r){var s=e(o.style,r.style),u=n(s.left)+t.plotLeft,a=n(s.top)+t.plotTop+12;delete s.left;delete s.top;i.text(r.html,u,a).attr({zIndex:2}).css(s).add()});if(u.enabled&&!t.credits)a=u.href,t.credits=i.text(u.text,0,0).on("click",function(){if(a)location.href=a}).attr({align:u.position.align,zIndex:8}).css(u.style).add().align(u.position);t.hasRendered=!0},destroy:function(){var e=this,t=e.axes,n=e.series,r=e.container,i,s=r&&r.parentNode;ln(e,"destroy");Ct[e.index]=W;e.renderTo.removeAttribute("data-highcharts-chart");fn(e);for(i=t.length;i--;)t[i]=t[i].destroy();for(i=n.length;i--;)n[i]=n[i].destroy();rn("title,subtitle,chartBackground,plotBackground,plotBGImage,plotBorder,seriesGroup,clipRect,credits,pointer,scroller,rangeSelector,legend,resetZoomButton,tooltip,renderer".split(","),function(t){var n=e[t];n&&n.destroy&&(e[t]=n.destroy())});if(r)r.innerHTML="",fn(r),s&&O(r);for(i in e)delete e[i]},isReadyToRender:function(){var e=this;return!ht&&V==V.top&&X.readyState!=="complete"\|\|dt&&!V.canvg?(dt?bn.push(function(){e.firstRender()},e.options.global.canvasToolsURL):X.attachEvent("onreadystatechange",function(){X.detachEvent("onreadystatechange",e.firstRender);X.readyState==="complete"&&e.firstRender()}),!1):!0},firstRender:function(){var e=this,t=e.options,n=e.callback;if(e.isReadyToRender())e.getContainer(),ln(e,"init"),e.resetMargins(),e.setChartSize(),e.propFromSeries(),e.getAxes(),rn(t.series\|\|[],function(t){e.initSeries(t)}),ln(e,"beforeRender"),e.pointer=new R(e,t),e.render(),e.renderer.draw(),n&&n.apply(e,[e]),rn(e.callbacks,function(t){t.apply(e,[e])}),e.cloneRenderTo(!0),ln(e,"load")}};z.prototype.callbacks=[];var wn=function(){};wn.prototype={init:function(e,t,n){this.series=e;this.applyOptions(t,n);this.pointAttr={};if(e.options.colorByPoint&&(t=e.options.colors\|\|e.chart.options.colors,this.color=this.color\|\|t[e.colorCounter++],e.colorCounter===t.length))e.colorCounter=0;e.chart.pointCount++;return this},applyOptions:function(t,n){var r=this.series,i=r.pointValKey,t=wn.prototype.optionsToObject.call(this,t);e(this,t);this.options=this.options?e(this.options,t):t;if(i)this.y=this[i];if(this.x===W&&r)this.x=n===W?r.autoIncrement():n;return this},optionsToObject:function(e){var t,n=this.series,r=n.pointArrayMap\|\|["y"],i=r.length,o=0,u=0;if(typeof e==="number"\|\|e===null)t={y:e};else if(s(e)){t={};if(e.length>i){n=typeof e[0];if(n==="string")t.name=e[0];else if(n==="number")t.x=e[0];o++}for(;u<i;)t[r[u++]]=e[o++]}else if(typeof e==="object"){t=e;if(e.dataLabels)n._hasPointLabels=!0;if(e.marker)n._hasPointMarkers=!0}return t},destroy:function(){var e=this.series.chart,t=e.hoverPoints,n;e.pointCount--;if(t&&(this.setState(),f(t,this),!t.length))e.hoverPoints=null;if(this===e.hoverPoint)this.onMouseOut();if(this.graphic\|\|this.dataLabel)fn(this),this.destroyElements();this.legendItem&&e.legend.destroyItem(this);for(n in this)this[n]=null},destroyElements:function(){for(var e="graphic,dataLabel,dataLabelUpper,group,connector,shadowGroup".split(","),t,n=6;n--;)t=e[n],this[t]&&(this[t]=this[t].destroy())},getLabelConfig:function(){return{x:this.category,y:this.y,key:this.name\|\|this.category,series:this.series,point:this,percentage:this.percentage,total:this.total\|\|this.stackTotal}},select:function(e,t){var n=this,r=n.series,i=r.chart,e=p(e,!n.selected);n.firePointEvent(e?"select":"unselect",{accumulate:t},function(){n.selected=n.options.selected=e;r.options.data[nn(n,r.data)]=n.options;n.setState(e&&"select");t\|\|rn(i.getSelectedPoints(),function(e){if(e.selected&&e!==n)e.selected=e.options.selected=!1,r.options.data[nn(e,r.data)]=e.options,e.setState(""),e.firePointEvent("unselect")})})},onMouseOver:function(e){var t=this.series,n=t.chart,r=n.tooltip,i=n.hoverPoint;if(i&&i!==this)i.onMouseOut();this.firePointEvent("mouseOver");r&&(!r.shared\|\|t.noSharedTooltip)&&r.refresh(this,e);this.setState("hover");n.hoverPoint=this},onMouseOut:function(){var e=this.series.chart,t=e.hoverPoints;if(!t\|\|nn(this,t)===-1)this.firePointEvent("mouseOut"),this.setState(),e.hoverPoint=null},tooltipFormatter:function(e){var t=this.series,n=t.tooltipOptions,r=p(n.valueDecimals,""),i=n.valuePrefix\|\|"",s=n.valueSuffix\|\|"";rn(t.pointArrayMap\|\|["y"],function(t){t="{point."+t;if(i\|\|s)e=e.replace(t+"}",i+t+"}"+s);e=e.replace(t+"}",t+":,."+r+"f}")});return w(e,{point:this,series:this.series})},update:function(e,t,n){var r=this,s=r.series,o=r.graphic,u,a=s.data,f=s.chart,l=s.options,t=p(t,!0);r.firePointEvent("update",{options:e},function(){r.applyOptions(e);i(e)&&(s.getAttribs(),o&&o.attr(r.pointAttr[s.state]));u=nn(r,a);s.xData[u]=r.x;s.yData[u]=s.toYData?s.toYData(r):r.y;s.zData[u]=r.z;l.data[u]=r.options;s.isDirty=s.isDirtyData=f.isDirtyBox=!0;l.legendType==="point"&&f.legend.destroyItem(r);t&&f.redraw(n)})},remove:function(e,t){var n=this,r=n.series,i=r.chart,s,o=r.data;D(t,i);e=p(e,!0);n.firePointEvent("remove",null,function(){s=nn(n,o);o.splice(s,1);r.options.data.splice(s,1);r.xData.splice(s,1);r.yData.splice(s,1);r.zData.splice(s,1);n.destroy();r.isDirty=!0;r.isDirtyData=!0;e&&i.redraw()})},firePointEvent:function(e,t,n){var r=this,i=this.series.options;(i.point.events[e]\|\|r.options&&r.options.events&&r.options.events[e])&&this.importEvents();e==="click"&&i.allowPointSelect&&(n=function(e){r.select(null,e.ctrlKey\|\|e.metaKey\|\|e.shiftKey)});ln(this,e,t,n)},importEvents:function(){if(!this.hasImportedEvents){var e=t(this.series.options.point,this.options).events,n;this.events=e;for(n in e)an(this,n,e[n]);this.hasImportedEvents=!0}},setState:function(e){var n=this.plotX,r=this.plotY,i=this.series,s=i.options.states,o=dn[i.type].marker&&i.options.marker,u=o&&!o.enabled,a=o&&o.states[e],f=a&&a.enabled===!1,l=i.stateMarkerGraphic,c=this.marker\|\|{},h=i.chart,p=this.pointAttr,e=e\|\|"";if(!(e===this.state\|\|this.selected&&e!=="select"\|\|s[e]&&s[e].enabled===!1\|\|e&&(f\|\|u&&!a.enabled))){if(this.graphic)s=o&&this.graphic.symbolName&&p[e].r,this.graphic.attr(t(p[e],s?{x:n-s,y:r-s,width:2s,height:2s}:{}));else{if(e&&a)s=a.radius,c=c.symbol\|\|i.symbol,l&&l.currentSymbol!==c&&(l=l.destroy()),l?l.attr({x:n-s,y:r-s}):(i.stateMarkerGraphic=l=h.renderer.symbol(c,n-s,r-s,2s,2s).attr(p[e]).add(i.markerGroup),l.currentSymbol=c);if(l)l[e&&h.isInsidePlot(n,r)?"show":"hide"]()}this.state=e}}};var En=function(){};En.prototype={isCartesian:!0,type:"line",pointClass:wn,sorted:!0,requireSorting:!0,pointAttrToOptions:{stroke:"lineColor","stroke-width":"lineWidth",fill:"fillColor",r:"radius"},colorCounter:0,init:function(t,n){var i,s,o=t.series;this.chart=t;this.options=n=this.setOptions(n);this.bindAxes();e(this,{name:n.name,state:"",pointAttr:{},visible:n.visible!==!1,selected:n.selected===!0});if(dt)n.animation=!1;s=n.events;for(i in s)an(this,i,s[i]);if(s&&s.click\|\|n.point&&n.point.events&&n.point.events.click\|\|n.allowPointSelect)t.runTrackerClick=!0;this.getColor();this.getSymbol();this.setData(n.data,!1);if(this.isCartesian)t.hasCartesianSeries=!0;o.push(this);this._i=o.length-1;C(o,function(e,t){return p(e.options.index,e._i)-p(t.options.index,e._i)});rn(o,function(e,t){e.index=t;e.name=e.name\|\|"Series "+(t+1)});i=n.linkedTo;this.linkedSeries=[];if(r(i)&&(i=i===":previous"?o[this.index-1]:t.get(i)))i.linkedSeries.push(this),this.linkedParent=i},bindAxes:function(){var e=this,t=e.options,n=e.chart,r;e.isCartesian&&rn(["xAxis","yAxis"],function(i){rn(n[i],function(n){r=n.options;if(t[i]===r.index\|\|t[i]!==W&&t[i]===r.id\|\|t[i]===W&&r.index===0)n.series.push(e),e[i]=n,n.isDirty=!0});e[i]\|\|M(18,!0)})},autoIncrement:function(){var e=this.options,t=this.xIncrement,t=p(t,e.pointStart,0);this.pointInterval=p(this.pointInterval,e.pointInterval,1);this.xIncrement=t+this.pointInterval;return t},getSegments:function(){var e=-1,t=[],n,r=this.points,i=r.length;if(i)if(this.options.connectNulls){for(n=i;n--;)r[n].y===null&&r.splice(n,1);r.length&&(t=[r])}else rn(r,function(n,s){n.y===null?(s>e+1&&t.push(r.slice(e+1,s)),e=s):s===i-1&&t.push(r.slice(e+1,s+1))});this.segments=t},setOptions:function(e){var n=this.chart.options,r=n.plotOptions,i=r[this.type];this.userOptions=e;e=t(i,r.series,e);this.tooltipOptions=t(n.tooltip,e.tooltip);i.marker===null&&delete e.marker;return e},getColor:function(){var e=this.options,t=this.userOptions,n=this.chart.options.colors,r=this.chart.counters,i;i=e.color\|\|dn[this.type].color;if(!i&&!e.colorByPoint)l(t._colorIndex)?e=t._colorIndex:(t._colorIndex=r.color,e=r.color++),i=n[e];this.color=i;r.wrapColor(n.length)},getSymbol:function(){var e=this.userOptions,t=this.options.marker,n=this.chart,r=n.options.symbols,n=n.counters;this.symbol=t.symbol;if(!this.symbol)l(e._symbolIndex)?e=e._symbolIndex:(e._symbolIndex=n.symbol,e=n.symbol++),this.symbol=r[e];if(/^url/.test(this.symbol))t.radius=0;n.wrapSymbol(r.length)},drawLegendSymbol:function(e){var t=this.options,n=t.marker,r=e.options,i;i=r.symbolWidth;var s=this.chart.renderer,o=this.legendGroup,e=e.baseline-J(s.fontMetrics(r.itemStyle.fontSize).b.3);if(t.lineWidth){r={"stroke-width":t.lineWidth};if(t.dashStyle)r.dashstyle=t.dashStyle;this.legendLine=s.path(["M",0,e,"L",i,e]).attr(r).add(o)}if(n&&n.enabled)t=n.radius,this.legendSymbol=i=s.symbol(this.symbol,i/2-t,e-t,2t,2t).add(o),i.isMarker=!0},addPoint:function(e,t,n,r){var i=this.options,s=this.data,o=this.graph,u=this.area,a=this.chart,f=this.xData,l=this.yData,c=this.zData,h=this.names,d=o&&o.shift\|\|0,v=i.data;D(r,a);n&&rn([o,u,this.graphNeg,this.areaNeg],function(e){if(e)e.shift=d+1});if(u)u.isArea=!0;t=p(t,!0);r={series:this};this.pointClass.prototype.applyOptions.apply(r,[e]);f.push(r.x);l.push(this.toYData?this.toYData(r):r.y);c.push(r.z);if(h)h[r.x]=r.name;v.push(e);i.legendType==="point"&&this.generatePoints();n&&(s[0]&&s[0].remove?s[0].remove(!1):(s.shift(),f.shift(),l.shift(),c.shift(),v.shift()));this.isDirtyData=this.isDirty=!0;t&&(this.getAttribs(),a.redraw())},setData:function(e,t){var n=this.points,i=this.options,u=this.chart,a=null,f=this.xAxis,l=f&&f.categories&&!f.categories.length?[]:null,c;this.xIncrement=null;this.pointRange=f&&f.categories?1:i.pointRange;this.colorCounter=0;var h=[],d=[],v=[],m=e?e.length:[];c=p(i.turboThreshold,1e3);var 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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	130 rn(e.points,function(s){var o=s.plotY,u=s.graphic;if(o!==W&&!isNaN(o)&&s.y!==null)i=s.shapeArgs,u?(pn(u),u.animate(t(i))):s.graphic=r[s.shapeType](i).attr(s.pointAttr[s.selected?"select":""]).add(e.group).shadow(n.shadow,null,n.stacking&&!n.borderRadius);else if(u)s.graphic=u.destroy()})},drawTracker:function(){var e=this,t=e.chart,n=t.pointer,r=e.options.cursor,i=r&&{cursor:r},s=function(n){var 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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	131
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	132 $(function () {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	133 $('table tbody tr td, table tfoot tr td').each(function(){
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	134 if(isNumber($(this).text())){
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	135 $(this).text(addCommas($(this).text()));
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	136 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	137 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	138 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	139
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	140 function isNumber(n) {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	141 return !isNaN(parseFloat(n)) && isFinite(n);
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	142 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	143
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	144 function addCommas(nStr) {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	145 nStr += '';
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	146 x = nStr.split('.');
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	147 x1 = x[0];
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	148 x2 = x.length > 1 ? '.' + x[1] : '';
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	149 var rgx = /(\d+)(\d{3})/;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	150 while (rgx.test(x1)) {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	151 x1 = x1.replace(rgx, '$1' + ',' + '$2');
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	152 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	153 return x1 + x2;
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	154 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	155
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	156 </script>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	157 <script type='text/javascript'>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	158
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	159 // Mapping Analysis
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	160 $(function () {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	161 $('#truncating_mapping_plot').highcharts({
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	162 colors: [
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	163 '#0d233a',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	164 '#2f7ed8',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	165 '#8bbc21',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	166 '#910000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	167 '#1aadce',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	168 '#492970',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	169 '#f28f43',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	170 '#77a1e5',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	171 '#c42525',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	172 '#a6c96a'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	173 ],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	174 chart: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	175 type: 'column',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	176 marginRight:0
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	177 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	178 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	179 text: ''
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	180 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	181 xAxis: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	182 categories: ['Total Reads',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	183 'Not Truncated',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	184 'Truncated',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	185 'Too short to map',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	186 'Unique Alignments',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	187 'Multiple Alignments',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	188 'Failed To Align',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	189 'Paired']
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	190 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	191 yAxis: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	192 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	193 text: 'Number of Reads'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	194 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	195 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	196 credits: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	197 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	198 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	199 tooltip: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	200 formatter: function() {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	201 if(this.series.name == 'Read 1'){
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	202 return '<b>'+ this.series.name + '</b><br/>'+
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	203 this.x + ': ' +((this.y / 1000) * 100).toFixed(1) + '%';
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	204 } else {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	205 return '<b>'+ this.series.name + '</b><br/>'+
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	206 this.x + ': ' +((this.y / 1000) * 100).toFixed(1) + '%';
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	207 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	208 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	209 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	210 legend: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	211 align: 'right',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	212 verticalAlign: 'top',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	213 y: 10
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	214 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	215 series: [{
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	216 name: 'Read 1',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	217 data: [1000, 923, 77, 35, 14, 13, 938, 1]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	218 }, {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	219 name: 'Read 2',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	220 data: [1000, 939, 61, 24, 23, 7, 946, 1]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	221 }]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	222 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	223 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	224
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	225
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	226 // Di-Tag Analysis
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	227
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	228 $(function () {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	229 $('#ditag_plot').highcharts({
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	230 colors: [
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	231 '#0d233a',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	232 '#2f7ed8',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	233 '#8bbc21',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	234 '#910000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	235 '#1aadce',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	236 '#492970',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	237 '#f28f43',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	238 '#77a1e5',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	239 '#c42525',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	240 '#a6c96a'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	241 ],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	242 chart: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	243 plotBackgroundColor: null,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	244 plotBorderWidth: null,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	245 plotShadow: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	246 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	247 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	248 text: ''
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	249 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	250 plotOptions: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	251 pie: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	252 allowPointSelect: true,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	253 cursor: 'pointer',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	254 dataLabels: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	255 enabled: true,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	256 color: '#000000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	257 connectorColor: '#000000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	258 format: '<b>{point.name}</b>'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	259 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	260 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	261 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	262 credits: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	263 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	264 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	265 tooltip: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	266 formatter: function() {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	267 return '<b>'+ this.point.name + ':</b>'+this.percentage.toFixed(1) + '%';
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	268 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	269 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	270 series: [{
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	271 type: 'pie',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	272 name: 'Types of Pairs',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	273 data: [
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	274 {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	275 name: 'Valid Pairs',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	276 y: 1,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	277 sliced: true,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	278 selected: true
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	279 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	280 ['Same Fragment - Circularised', 0],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	281 ['Same Fragment - Dangling Ends', 0],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	282 ['Same Fragment - Internal', 0],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	283 ['Re-ligation', 0],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	284 ['Contiguous Sequence', 0],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	285 ['Wrong Size', 0]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	286 ]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	287 }]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	288 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	289 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	290
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	291
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	292
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	293
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	294
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	295
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	296
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	297
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	298
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	299 // Di-tag length plot
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	300 $(function () {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	301 $('#ditag_length_plot').highcharts({
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	302 colors: [
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	303 '#0d233a'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	304 ],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	305 chart: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	306 zoomType: 'x',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	307 marginRight: 80,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	308 alignTicks: false,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	309 plotBorderWidth:1
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	310 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	311 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	312 text: ''
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	313 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	314 subtitle: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	315 text: document.ontouchstart === undefined ?
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	316 'Click and drag in the plot area to zoom in' :
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	317 'Drag your finger over the plot to zoom in'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	318 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	319 xAxis: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	320 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	321 text: 'Di-tag size (bp)'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	322 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	323 // tickInterval: 50,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	324 minTickInterval: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	325 min: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	326
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	327 plotLines: [{
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	328 color: '#FF0000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	329 width: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	330 value: 0
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	331 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	332
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	333 {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	334 color: '#FF0000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	335 width: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	336 value: 0
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	337 }]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	338
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	339 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	340 yAxis: [{
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	341 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	342 text: 'Frequency (ditags per 10bp bin)'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	343 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	344 min: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	345 // max: 100,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	346 gridLineWidth: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	347 tickWidth: 1,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	348 lineWidth: 1
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	349 }],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	350 credits: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	351 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	352 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	353 tooltip: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	354 shared: true,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	355 headerFormat: '<b>Ditag size {point.x}</b><table>',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	356 pointFormat: '<tr><td><span style="color:{series.color};">{series.name} (ditags per 10bp bin)</span></td><td>{point.y}</td></tr>',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	357 footerFormat: '</table>',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	358 useHTML: true
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	359 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	360 legend: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	361 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	362 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	363 plotOptions: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	364 line: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	365 lineWidth: 1,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	366 marker: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	367 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	368 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	369 shadow: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	370 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	371 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	372
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	373 // Reverse order to get lines stacked correctly
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	374 series: [{
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	375 name: 'Frequency',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	376 yAxis: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	377 lineWidth: 3,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	378 legendIndex: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	379 data: [
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	380
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	381 ]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	382 }]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	383 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	384 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	385
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	386
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	387
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	388
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	389
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	390
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	391
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	392
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	393
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	394
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	395 // De-duplication Plot
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	396 $(function () {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	397 $('#deduplication_plot').highcharts({
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	398 colors: [
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	399 '#0d233a',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	400 '#2f7ed8',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	401 '#8bbc21',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	402 '#910000',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	403 '#1aadce',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	404 '#492970',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	405 '#f28f43',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	406 '#77a1e5',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	407 '#c42525',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	408 '#a6c96a'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	409 ],
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	410 chart: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	411 type: 'column'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	412 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	413 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	414 text: ''
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	415 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	416 xAxis: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	417 categories: ['All Di-Tags', 'Unique Di-Tags']
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	418 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	419 yAxis: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	420 min: 0,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	421 title: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	422 text: 'Number of Di-Tags'
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	423 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	424 stackLabels: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	425 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	426 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	427 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	428 legend: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	429 align: 'center',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	430 verticalAlign: 'bottom',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	431 y: 10,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	432 floating: false,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	433 backgroundColor: (Highcharts.theme && Highcharts.theme.legendBackgroundColorSolid) \|\| 'white',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	434 borderColor: '#CCC',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	435 borderWidth: 1,
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	436 shadow: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	437 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	438 tooltip: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	439 formatter: function() {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	440 return '<b>'+ this.series.name + ':</b>'+this.percentage.toFixed(1) + '%';
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	441 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	442 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	443 credits: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	444 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	445 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	446 plotOptions: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	447 column: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	448 stacking: 'normal',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	449 dataLabels: {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	450 enabled: false
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	451 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	452 }
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	453 },
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	454 series: [{
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	455 name: 'cis lt 10Kbp',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	456 data: [0, 0]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	457 }, {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	458 name: 'cis gt 10Kbp',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	459 data: [1, 1]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	460 }, {
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	461 name: 'trans',
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	462 data: [0, 0]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	463 }]
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	464 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	465 });
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	466
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	467 </script>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	468
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	469 <div class="container">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	470 <div class="header_title">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	471 <h1><a href="http://www.bioinformatics.babraham.ac.uk/projects/hicup/" target="_blank"><img alt="" src="data:image/png;base64,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" /></a></h1>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	472 <h2>Processing Report</h2>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	473 </div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	474 <div class="header_subtitle">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	475 <h4 WRAP CHAR>dataset_1265_4.dat</h4>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	476 <p>17-02-51_23-01-2017</p>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	477 </div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	478 <hr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	479
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	480 <h3>Truncating and Mapping </h3>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	481 <div class="data">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	482 <table class="data_table">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	483 <thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	484 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	485 <th> </th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	486 <th>Read 1</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	487 <th>Read 2</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	488 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	489 </thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	490 <tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	491 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	492 <th>Total Reads</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	493 <td>1000</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	494 <td>1000</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	495 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	496 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	497 <th>Not Truncated</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	498 <td>923</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	499 <td>939</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	500 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	501 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	502 <th>Truncated</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	503 <td>77</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	504 <td>61</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	505 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	506 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	507 <th>Too short to map</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	508 <td>35</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	509 <td>24</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	510 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	511 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	512 <th>Average length of truncated sequence</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	513 <td>21.39</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	514 <td>22.21</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	515 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	516 </tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	517 </table>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	518 <table class="data_table">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	519 <thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	520 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	521 <th> </th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	522 <th>Read 1</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	523 <th>Read 2</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	524 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	525 </thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	526 <tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	527 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	528 <th>Unique Alignments</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	529 <td>14</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	530 <td>23</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	531 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	532 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	533 <th>Multiple Alignments</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	534 <td>13</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	535 <td>7</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	536 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	537 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	538 <th>Failed To Align</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	539 <td>938</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	540 <td>946</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	541 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	542 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	543 <th>Paired</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	544 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	545 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	546 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	547 </tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	548 </table>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	549 </div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	550 <div id="truncating_mapping_plot" class="plot"></div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	551 <hr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	552
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	553
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	554 <h3>Filtering</h3>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	555 <table class="data data_table">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	556 <thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	557 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	558 <th> </th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	559 <th>Di-Tag Count</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	560 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	561 </thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	562 <tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	563 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	564 <th>Valid Pairs</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	565 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	566 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	567 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	568 <th>Invalid Pairs</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	569 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	570 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	571 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	572 <th>Same Circularised</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	573 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	574 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	575 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	576 <th>Same Fragment Dangling Ends</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	577 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	578 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	579 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	580 <th>Same Fragment Internal</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	581 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	582 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	583 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	584 <th>Re-ligation</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	585 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	586 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	587
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	588 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	589 <th>Contiguous Sequence</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	590 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	591 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	592 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	593 <th>Wrong Size</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	594 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	595 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	596 </tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	597 <tfoot>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	598 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	599 <th>Total Pairs</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	600 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	601 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	602 </tfoot>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	603 </table>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	604 <div id="ditag_plot" class="plot"></div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	605
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	606
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	607
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	608
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	609
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	610
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	611 <hr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	612 <h3>Di-tag length Distribution</h3>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	613 <div id="ditag_length_plot" class="plot"></div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	614 <hr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	615
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	616 <h3>De-duplication</h3>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	617 <h4>Percentage uniques: 100.00</h4>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	618 <table class="data data_table">
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	619 <thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	620 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	621 <th> </th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	622 <th>All Di-Tags</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	623 <th>Unique Di-Tags</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	624 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	625 </thead>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	626 <tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	627 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	628 <th>Read Pairs</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	629 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	630 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	631 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	632 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	633 <th>Cis-close (< 10Kbp)</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	634 <td>0 </td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	635 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	636 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	637 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	638 <th>Cis-far (> 10Kbp)</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	639 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	640 <td>1</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	641 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	642 <tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	643 <th>Trans</th>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	644 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	645 <td>0</td>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	646 </tr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	647 </tbody>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	648 </table>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	649 <div id="deduplication_plot" class="plot"></div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	650
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	651 <hr>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	652
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	653 <footer>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	654 <a style="float:right;" href="http://www.bioinformatics.babraham.ac.uk/"><img alt="Babraham Bioinformatics" 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" 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566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	655 <p>Analysis produced by <a href="http://www.bioinformatics.babraham.ac.uk/projects/hicup/"><strong>HiCUP</strong></a> (0.5.9) - a tool for mapping and performing quality control on Hi-C data.</p>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	656 <p>Report graphs rendered using <a href="http://jquery.com/">jQuery</a> and <a href="http://www.highcharts.com/">Highcharts</a>.</p>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	657 </footer>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	658 </div>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	659 </body>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	660 </html>
566da23a5a08 planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da bgruening parents: diff changeset	661

Mercurial > repos > bgruening > hicup_filter

annotate test-data/results.html @ 2:cfa9c047cda4 draft