Mercurial > repos > bgruening > hicup_mapper
annotate test-data/dataset.same_internal.filter.sam @ 3:f396b479c2f2 draft
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit e6a9507eb198c6bf2c63ddae387c262bfc8dbd16
author | bgruening |
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date | Thu, 09 Nov 2017 11:16:29 -0500 |
parents | 9ba09ebeb5aa |
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9ba09ebeb5aa
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da
bgruening
parents:
diff
changeset
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1 @HD VN:1.0 SO:unsorted |
9ba09ebeb5aa
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da
bgruening
parents:
diff
changeset
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2 @SQ SN:chr1 LN:199950 |
9ba09ebeb5aa
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da
bgruening
parents:
diff
changeset
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3 @PG ID:bowtie2 PN:bowtie2 VN:2.3.0 CL:"/home/wolffj/miniconda2/envs/hicup/bin/bowtie2-align-s --wrapper basic-0 --very-sensitive -x genome -p 1 - --passthrough" |
9ba09ebeb5aa
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da
bgruening
parents:
diff
changeset
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4 @PG ID:HiCUP Mapper VN:0.5.9 |
9ba09ebeb5aa
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da
bgruening
parents:
diff
changeset
|
5 @PG ID:HiCUP Truncater VN:0.5.9 DS:"Restriction enzyme --re1 A^AGCTT" |
9ba09ebeb5aa
planemo upload for repository https://github.com/joachimwolff/galaxytools/tree/hicup/tools/hicup commit b77cbc104261f8aa1524922f41c2a9a23052f5da
bgruening
parents:
diff
changeset
|
6 @PG ID:HiCUP Filter VN:0.5.9 DS:"Max insert 0 Min insert 0 Digest file digest_file.txt" |