diff hifiasm.xml @ 18:df25d4fb79b7 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/hifiasm commit 59abcbabcdbfb8b5bdb0abcd5d3f24fee19abd6f
author bgruening
date Wed, 17 Jan 2024 21:31:58 +0000
parents 0ee0c3089254
children 284a1cb82b61
line wrap: on
line diff
--- a/hifiasm.xml	Mon Nov 06 20:13:05 2023 +0000
+++ b/hifiasm.xml	Wed Jan 17 21:31:58 2024 +0000
@@ -2,7 +2,7 @@
     <description>haplotype-resolved de novo assembler for PacBio Hifi reads</description>
     <macros>
         <token name="@TOOL_VERSION@">0.19.8</token>
-        <token name="@VERSION_SUFFIX@">0</token>
+        <token name="@VERSION_SUFFIX@">1</token>
         <token name="@FORMATS@">fasta,fasta.gz,fastq,fastq.gz</token>
         <xml name="reads">
             <param name="reads" type="data" format="@FORMATS@" multiple="true" label="Input reads" />
@@ -270,7 +270,7 @@
             </param>
             <when value="blank" />
             <when value="set">
-                <param argument="--ul" type="data" format="fastq,fastq.gz,fasta,fasta.gz" multiple="true" label="Ultra-long (>10kb) reads" />
+                <param argument="--ul" type="data" format="fastq,fastq.gz,fasta,fasta.gz" multiple="true" label="Ultra-long (>100kb) reads" />
                 <param argument="--ul-rate" type="float" value="0.2" optional="true" label="error rate of ultra-long reads (default 0.2)" />
                 <param argument="--ul-tip" type="integer" value="6" optional="true" label="remove tip unitigs composed of less than (INT) reads for the UL assembly (default 6)" />
             </when>