Mercurial > repos > bgruening > interproscan
comparison interproscan.xml @ 7:1207025b9b9c draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/interproscan commit 3e5aef1ff8f33003ae2314b8df52c4f4187c37ef"
| author | iuc |
|---|---|
| date | Tue, 18 Jan 2022 12:08:42 +0000 |
| parents | 0cd163d805e3 |
| children | c55643c3d813 |
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| 6:0cd163d805e3 | 7:1207025b9b9c |
|---|---|
| 127 | 127 |
| 128 <tests> | 128 <tests> |
| 129 <test expect_num_outputs="1"> | 129 <test expect_num_outputs="1"> |
| 130 <param name="input" value="prots.fa" /> | 130 <param name="input" value="prots.fa" /> |
| 131 <param name="seqtype" value="p" /> | 131 <param name="seqtype" value="p" /> |
| 132 <param name="database" value="5.52-86.0" /> | 132 <param name="database" value="@TOOL_VERSION@" /> |
| 133 <param name="applications" value="MobiDBLite" /> | 133 <param name="applications" value="MobiDBLite" /> |
| 134 <param name="oformat" value="TSV" /> | 134 <param name="oformat" value="TSV" /> |
| 135 <output name="outfile_tsv"> | 135 <output name="outfile_tsv"> |
| 136 <assert_contents> | 136 <assert_contents> |
| 137 <has_text text="FUN_000011-T1" /> | 137 <has_text text="FUN_000011-T1" /> |
| 142 </output> | 142 </output> |
| 143 </test> | 143 </test> |
| 144 <test expect_num_outputs="4"> | 144 <test expect_num_outputs="4"> |
| 145 <param name="input" value="prots.fa" /> | 145 <param name="input" value="prots.fa" /> |
| 146 <param name="seqtype" value="p" /> | 146 <param name="seqtype" value="p" /> |
| 147 <param name="database" value="5.52-86.0" /> | 147 <param name="database" value="@TOOL_VERSION@" /> |
| 148 <param name="applications" value="MobiDBLite" /> | 148 <param name="applications" value="MobiDBLite" /> |
| 149 <param name="oformat" value="TSV,GFF3,XML,JSON" /> | 149 <param name="oformat" value="TSV,GFF3,XML,JSON" /> |
| 150 <output name="outfile_tsv"> | 150 <output name="outfile_tsv"> |
| 151 <assert_contents> | 151 <assert_contents> |
| 152 <has_text text="FUN_000011-T1" /> | 152 <has_text text="FUN_000011-T1" /> |
| 179 </output> | 179 </output> |
| 180 </test> | 180 </test> |
| 181 <test expect_num_outputs="4"> | 181 <test expect_num_outputs="4"> |
| 182 <param name="input" value="transcripts.fa" /> | 182 <param name="input" value="transcripts.fa" /> |
| 183 <param name="seqtype" value="n" /> | 183 <param name="seqtype" value="n" /> |
| 184 <param name="database" value="5.52-86.0" /> | 184 <param name="database" value="@TOOL_VERSION@" /> |
| 185 <param name="applications" value="MobiDBLite" /> | 185 <param name="applications" value="MobiDBLite" /> |
| 186 <param name="oformat" value="TSV,GFF3,XML,JSON" /> | 186 <param name="oformat" value="TSV,GFF3,XML,JSON" /> |
| 187 <output name="outfile_tsv"> | 187 <output name="outfile_tsv"> |
| 188 <assert_contents> | 188 <assert_contents> |
| 189 <has_text text="FUN_000018-T1_orf336" /> | 189 <has_text text="FUN_000018-T1_orf336" /> |
| 216 </output> | 216 </output> |
| 217 </test> | 217 </test> |
| 218 <test expect_failure="true" expect_num_outputs="1"> | 218 <test expect_failure="true" expect_num_outputs="1"> |
| 219 <param name="input" value="prots.fa" /> | 219 <param name="input" value="prots.fa" /> |
| 220 <param name="seqtype" value="p" /> | 220 <param name="seqtype" value="p" /> |
| 221 <param name="database" value="5.52-86.0" /> | 221 <param name="database" value="@TOOL_VERSION@" /> |
| 222 <param name="applications" value="MobiDBLite" /> | 222 <param name="applications" value="MobiDBLite" /> |
| 223 <conditional name="licensed"> | 223 <conditional name="licensed"> |
| 224 <param name="use" value="true" /> | 224 <param name="use" value="true" /> |
| 225 <param name="applications_licensed" value="Phobius,TMHMM" /> | 225 <param name="applications_licensed" value="Phobius,TMHMM" /> |
| 226 </conditional> | 226 </conditional> |