Mercurial > repos > bgruening > keras_model_config
comparison test-data/keras_batch_params01.tabular @ 0:1046cf73236b draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 60f0fbc0eafd7c11bc60fb6c77f2937782efd8a9-dirty
author | bgruening |
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date | Fri, 09 Aug 2019 07:14:22 -0400 |
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children | c3813c64d678 |
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1 Parameter Value | |
2 @ amsgrad amsgrad: None | |
3 @ batch_size batch_size: 32 | |
4 @ beta_1 beta_1: None | |
5 @ beta_2 beta_2: None | |
6 @ callbacks callbacks: [{'callback_selection': {'callback_type': 'None'}}] | |
7 @ class_positive_factor class_positive_factor: 1.0 | |
8 @ config config: {'name': 'sequential_1', 'layers': [{'class_name': 'Dense', 'config': {'name': 'dense_1', 'trainable | |
9 @ data_batch_generator "data_batch_generator: FastaDNABatchGenerator(fasta_path='to_be_determined', seed=999, | |
10 seq_length=1000, shuffle=True)" | |
11 @ decay decay: 0.0 | |
12 @ epochs epochs: 100 | |
13 @ epsilon epsilon: None | |
14 @ layers_0_Dense layers_0_Dense: {'class_name': 'Dense', 'config': {'name': 'dense_1', 'trainable': True, 'batch_input_shape': [None, | |
15 @ layers_1_Activation layers_1_Activation: {'class_name': 'Activation', 'config': {'name': 'activation_1', 'trainable': True, 'activation': 're | |
16 @ layers_2_Dense layers_2_Dense: {'class_name': 'Dense', 'config': {'name': 'dense_2', 'trainable': True, 'units': 10, 'activation': | |
17 @ layers_3_Activation layers_3_Activation: {'class_name': 'Activation', 'config': {'name': 'activation_2', 'trainable': True, 'activation': 'so | |
18 @ loss loss: 'binary_crossentropy' | |
19 @ lr lr: 0.01 | |
20 @ metrics metrics: ['acc'] | |
21 @ model_type model_type: 'sequential' | |
22 @ momentum momentum: 0.0 | |
23 * n_jobs n_jobs: 1 | |
24 @ nesterov nesterov: False | |
25 @ optimizer optimizer: 'sgd' | |
26 @ prediction_steps prediction_steps: None | |
27 @ rho rho: None | |
28 @ schedule_decay schedule_decay: None | |
29 @ seed seed: None | |
30 @ steps_per_epoch steps_per_epoch: None | |
31 @ validation_data validation_data: None | |
32 @ validation_steps validation_steps: None | |
33 @ verbose verbose: 0 | |
34 * data_batch_generator__fasta_path data_batch_generator__fasta_path: 'to_be_determined' | |
35 @ data_batch_generator__seed data_batch_generator__seed: 999 | |
36 @ data_batch_generator__seq_length data_batch_generator__seq_length: 1000 | |
37 @ data_batch_generator__shuffle data_batch_generator__shuffle: True | |
38 * layers_0_Dense__class_name layers_0_Dense__class_name: 'Dense' | |
39 @ layers_0_Dense__config layers_0_Dense__config: {'name': 'dense_1', 'trainable': True, 'batch_input_shape': [None, 784], 'dtype': 'float32', 'units' | |
40 @ layers_0_Dense__config__activation layers_0_Dense__config__activation: 'linear' | |
41 @ layers_0_Dense__config__activity_regularizer layers_0_Dense__config__activity_regularizer: None | |
42 @ layers_0_Dense__config__batch_input_shape layers_0_Dense__config__batch_input_shape: [None, 784] | |
43 @ layers_0_Dense__config__bias_constraint layers_0_Dense__config__bias_constraint: None | |
44 @ layers_0_Dense__config__bias_initializer layers_0_Dense__config__bias_initializer: {'class_name': 'Zeros', 'config': {}} | |
45 * layers_0_Dense__config__bias_initializer__class_name layers_0_Dense__config__bias_initializer__class_name: 'Zeros' | |
46 @ layers_0_Dense__config__bias_initializer__config layers_0_Dense__config__bias_initializer__config: {} | |
47 @ layers_0_Dense__config__bias_regularizer layers_0_Dense__config__bias_regularizer: None | |
48 @ layers_0_Dense__config__dtype layers_0_Dense__config__dtype: 'float32' | |
49 @ layers_0_Dense__config__kernel_constraint layers_0_Dense__config__kernel_constraint: None | |
50 @ layers_0_Dense__config__kernel_initializer layers_0_Dense__config__kernel_initializer: {'class_name': 'VarianceScaling', 'config': {'scale': 1.0, 'mode': 'fan_avg', 'distribution': 'unifo | |
51 * layers_0_Dense__config__kernel_initializer__class_name layers_0_Dense__config__kernel_initializer__class_name: 'VarianceScaling' | |
52 @ layers_0_Dense__config__kernel_initializer__config layers_0_Dense__config__kernel_initializer__config: {'scale': 1.0, 'mode': 'fan_avg', 'distribution': 'uniform', 'seed': None} | |
53 @ layers_0_Dense__config__kernel_initializer__config__distribution layers_0_Dense__config__kernel_initializer__config__distribution: 'uniform' | |
54 @ layers_0_Dense__config__kernel_initializer__config__mode layers_0_Dense__config__kernel_initializer__config__mode: 'fan_avg' | |
55 @ layers_0_Dense__config__kernel_initializer__config__scale layers_0_Dense__config__kernel_initializer__config__scale: 1.0 | |
56 @ layers_0_Dense__config__kernel_initializer__config__seed layers_0_Dense__config__kernel_initializer__config__seed: None | |
57 @ layers_0_Dense__config__kernel_regularizer layers_0_Dense__config__kernel_regularizer: None | |
58 * layers_0_Dense__config__name layers_0_Dense__config__name: 'dense_1' | |
59 @ layers_0_Dense__config__trainable layers_0_Dense__config__trainable: True | |
60 @ layers_0_Dense__config__units layers_0_Dense__config__units: 32 | |
61 @ layers_0_Dense__config__use_bias layers_0_Dense__config__use_bias: True | |
62 * layers_1_Activation__class_name layers_1_Activation__class_name: 'Activation' | |
63 @ layers_1_Activation__config layers_1_Activation__config: {'name': 'activation_1', 'trainable': True, 'activation': 'relu'} | |
64 @ layers_1_Activation__config__activation layers_1_Activation__config__activation: 'relu' | |
65 * layers_1_Activation__config__name layers_1_Activation__config__name: 'activation_1' | |
66 @ layers_1_Activation__config__trainable layers_1_Activation__config__trainable: True | |
67 * layers_2_Dense__class_name layers_2_Dense__class_name: 'Dense' | |
68 @ layers_2_Dense__config layers_2_Dense__config: {'name': 'dense_2', 'trainable': True, 'units': 10, 'activation': 'linear', 'use_bias': True, 'kerne | |
69 @ layers_2_Dense__config__activation layers_2_Dense__config__activation: 'linear' | |
70 @ layers_2_Dense__config__activity_regularizer layers_2_Dense__config__activity_regularizer: None | |
71 @ layers_2_Dense__config__bias_constraint layers_2_Dense__config__bias_constraint: None | |
72 @ layers_2_Dense__config__bias_initializer layers_2_Dense__config__bias_initializer: {'class_name': 'Zeros', 'config': {}} | |
73 * layers_2_Dense__config__bias_initializer__class_name layers_2_Dense__config__bias_initializer__class_name: 'Zeros' | |
74 @ layers_2_Dense__config__bias_initializer__config layers_2_Dense__config__bias_initializer__config: {} | |
75 @ layers_2_Dense__config__bias_regularizer layers_2_Dense__config__bias_regularizer: None | |
76 @ layers_2_Dense__config__kernel_constraint layers_2_Dense__config__kernel_constraint: None | |
77 @ layers_2_Dense__config__kernel_initializer layers_2_Dense__config__kernel_initializer: {'class_name': 'VarianceScaling', 'config': {'scale': 1.0, 'mode': 'fan_avg', 'distribution': 'unifo | |
78 * layers_2_Dense__config__kernel_initializer__class_name layers_2_Dense__config__kernel_initializer__class_name: 'VarianceScaling' | |
79 @ layers_2_Dense__config__kernel_initializer__config layers_2_Dense__config__kernel_initializer__config: {'scale': 1.0, 'mode': 'fan_avg', 'distribution': 'uniform', 'seed': None} | |
80 @ layers_2_Dense__config__kernel_initializer__config__distribution layers_2_Dense__config__kernel_initializer__config__distribution: 'uniform' | |
81 @ layers_2_Dense__config__kernel_initializer__config__mode layers_2_Dense__config__kernel_initializer__config__mode: 'fan_avg' | |
82 @ layers_2_Dense__config__kernel_initializer__config__scale layers_2_Dense__config__kernel_initializer__config__scale: 1.0 | |
83 @ layers_2_Dense__config__kernel_initializer__config__seed layers_2_Dense__config__kernel_initializer__config__seed: None | |
84 @ layers_2_Dense__config__kernel_regularizer layers_2_Dense__config__kernel_regularizer: None | |
85 * layers_2_Dense__config__name layers_2_Dense__config__name: 'dense_2' | |
86 @ layers_2_Dense__config__trainable layers_2_Dense__config__trainable: True | |
87 @ layers_2_Dense__config__units layers_2_Dense__config__units: 10 | |
88 @ layers_2_Dense__config__use_bias layers_2_Dense__config__use_bias: True | |
89 * layers_3_Activation__class_name layers_3_Activation__class_name: 'Activation' | |
90 @ layers_3_Activation__config layers_3_Activation__config: {'name': 'activation_2', 'trainable': True, 'activation': 'softmax'} | |
91 @ layers_3_Activation__config__activation layers_3_Activation__config__activation: 'softmax' | |
92 * layers_3_Activation__config__name layers_3_Activation__config__name: 'activation_2' | |
93 @ layers_3_Activation__config__trainable layers_3_Activation__config__trainable: True | |
94 Note: @, params eligible for search in searchcv tool. |