diff test-data/keras02.json @ 0:03f61bb3ca43 draft

"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 5b2ac730ec6d3b762faa9034eddd19ad1b347476"
author bgruening
date Mon, 16 Dec 2019 05:36:53 -0500
parents
children b3093f953091
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/keras02.json	Mon Dec 16 05:36:53 2019 -0500
@@ -0,0 +1,385 @@
+{
+  "class_name": "Model",
+  "config": {
+    "name": "model_1",
+    "layers": [
+      {
+        "name": "main_input",
+        "class_name": "InputLayer",
+        "config": {
+          "batch_input_shape": [
+            null,
+            100
+          ],
+          "dtype": "int32",
+          "sparse": false,
+          "name": "main_input"
+        },
+        "inbound_nodes": []
+      },
+      {
+        "name": "embedding_1",
+        "class_name": "Embedding",
+        "config": {
+          "name": "embedding_1",
+          "trainable": true,
+          "batch_input_shape": [
+            null,
+            100
+          ],
+          "dtype": "float32",
+          "input_dim": 10000,
+          "output_dim": 512,
+          "embeddings_initializer": {
+            "class_name": "RandomUniform",
+            "config": {
+              "minval": -0.05,
+              "maxval": 0.05,
+              "seed": null
+            }
+          },
+          "embeddings_regularizer": null,
+          "activity_regularizer": null,
+          "embeddings_constraint": null,
+          "mask_zero": false,
+          "input_length": 100
+        },
+        "inbound_nodes": [
+          [
+            [
+              "main_input",
+              0,
+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
+        "name": "lstm_1",
+        "class_name": "LSTM",
+        "config": {
+          "name": "lstm_1",
+          "trainable": true,
+          "dtype": "float32",
+          "return_sequences": false,
+          "return_state": false,
+          "go_backwards": false,
+          "stateful": false,
+          "unroll": false,
+          "units": 32,
+          "activation": "tanh",
+          "recurrent_activation": "sigmoid",
+          "use_bias": true,
+          "kernel_initializer": {
+            "class_name": "VarianceScaling",
+            "config": {
+              "scale": 1.0,
+              "mode": "fan_avg",
+              "distribution": "uniform",
+              "seed": null
+            }
+          },
+          "recurrent_initializer": {
+            "class_name": "Orthogonal",
+            "config": {
+              "gain": 1.0,
+              "seed": null
+            }
+          },
+          "bias_initializer": {
+            "class_name": "Zeros",
+            "config": {}
+          },
+          "unit_forget_bias": true,
+          "kernel_regularizer": null,
+          "recurrent_regularizer": null,
+          "bias_regularizer": null,
+          "activity_regularizer": null,
+          "kernel_constraint": null,
+          "recurrent_constraint": null,
+          "bias_constraint": null,
+          "dropout": 0.0,
+          "recurrent_dropout": 0.0,
+          "implementation": 2
+        },
+        "inbound_nodes": [
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+              0,
+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
+        "name": "dense_1",
+        "class_name": "Dense",
+        "config": {
+          "name": "dense_1",
+          "trainable": true,
+          "dtype": "float32",
+          "units": 1,
+          "activation": "sigmoid",
+          "use_bias": true,
+          "kernel_initializer": {
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+              "mode": "fan_avg",
+              "distribution": "uniform",
+              "seed": null
+            }
+          },
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+          "activity_regularizer": null,
+          "kernel_constraint": null,
+          "bias_constraint": null
+        },
+        "inbound_nodes": [
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+              "lstm_1",
+              0,
+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
+        "name": "aux_input",
+        "class_name": "InputLayer",
+        "config": {
+          "batch_input_shape": [
+            null,
+            5
+          ],
+          "dtype": "float32",
+          "sparse": false,
+          "name": "aux_input"
+        },
+        "inbound_nodes": []
+      },
+      {
+        "name": "concatenate_1",
+        "class_name": "Concatenate",
+        "config": {
+          "name": "concatenate_1",
+          "trainable": true,
+          "dtype": "float32",
+          "axis": -1
+        },
+        "inbound_nodes": [
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+              0,
+              {}
+            ],
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+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
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+        "class_name": "Dense",
+        "config": {
+          "name": "dense_2",
+          "trainable": true,
+          "dtype": "float32",
+          "units": 64,
+          "activation": "relu",
+          "use_bias": true,
+          "kernel_initializer": {
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+            "config": {
+              "scale": 1.0,
+              "mode": "fan_avg",
+              "distribution": "uniform",
+              "seed": null
+            }
+          },
+          "bias_initializer": {
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+            "config": {}
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+          "kernel_regularizer": null,
+          "bias_regularizer": null,
+          "activity_regularizer": null,
+          "kernel_constraint": null,
+          "bias_constraint": null
+        },
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+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
+        "name": "dense_3",
+        "class_name": "Dense",
+        "config": {
+          "name": "dense_3",
+          "trainable": true,
+          "dtype": "float32",
+          "units": 64,
+          "activation": "relu",
+          "use_bias": true,
+          "kernel_initializer": {
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+            "config": {
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+              "mode": "fan_avg",
+              "distribution": "uniform",
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+          "kernel_constraint": null,
+          "bias_constraint": null
+        },
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+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
+        "name": "dense_4",
+        "class_name": "Dense",
+        "config": {
+          "name": "dense_4",
+          "trainable": true,
+          "dtype": "float32",
+          "units": 64,
+          "activation": "relu",
+          "use_bias": true,
+          "kernel_initializer": {
+            "class_name": "VarianceScaling",
+            "config": {
+              "scale": 1.0,
+              "mode": "fan_avg",
+              "distribution": "uniform",
+              "seed": null
+            }
+          },
+          "bias_initializer": {
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+          "kernel_regularizer": null,
+          "bias_regularizer": null,
+          "activity_regularizer": null,
+          "kernel_constraint": null,
+          "bias_constraint": null
+        },
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+              0,
+              0,
+              {}
+            ]
+          ]
+        ]
+      },
+      {
+        "name": "dense_5",
+        "class_name": "Dense",
+        "config": {
+          "name": "dense_5",
+          "trainable": true,
+          "dtype": "float32",
+          "units": 1,
+          "activation": "sigmoid",
+          "use_bias": true,
+          "kernel_initializer": {
+            "class_name": "VarianceScaling",
+            "config": {
+              "scale": 1.0,
+              "mode": "fan_avg",
+              "distribution": "uniform",
+              "seed": null
+            }
+          },
+          "bias_initializer": {
+            "class_name": "Zeros",
+            "config": {}
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+          "kernel_regularizer": null,
+          "bias_regularizer": null,
+          "activity_regularizer": null,
+          "kernel_constraint": null,
+          "bias_constraint": null
+        },
+        "inbound_nodes": [
+          [
+            [
+              "dense_4",
+              0,
+              0,
+              {}
+            ]
+          ]
+        ]
+      }
+    ],
+    "input_layers": [
+      [
+        "main_input",
+        0,
+        0
+      ],
+      [
+        "aux_input",
+        0,
+        0
+      ]
+    ],
+    "output_layers": [
+      [
+        "dense_1",
+        0,
+        0
+      ],
+      [
+        "dense_5",
+        0,
+        0
+      ]
+    ]
+  },
+  "keras_version": "2.3.1",
+  "backend": "tensorflow"
+}
\ No newline at end of file