Mercurial > repos > bgruening > keras_train_and_eval
diff test-data/keras02.json @ 0:03f61bb3ca43 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/sklearn commit 5b2ac730ec6d3b762faa9034eddd19ad1b347476"
| author | bgruening |
|---|---|
| date | Mon, 16 Dec 2019 05:36:53 -0500 |
| parents | |
| children | b3093f953091 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/keras02.json Mon Dec 16 05:36:53 2019 -0500 @@ -0,0 +1,385 @@ +{ + "class_name": "Model", + "config": { + "name": "model_1", + "layers": [ + { + "name": "main_input", + "class_name": "InputLayer", + "config": { + "batch_input_shape": [ + null, + 100 + ], + "dtype": "int32", + "sparse": false, + "name": "main_input" + }, + "inbound_nodes": [] + }, + { + "name": "embedding_1", + "class_name": "Embedding", + "config": { + "name": "embedding_1", + "trainable": true, + "batch_input_shape": [ + null, + 100 + ], + "dtype": "float32", + "input_dim": 10000, + "output_dim": 512, + "embeddings_initializer": { + "class_name": "RandomUniform", + "config": { + "minval": -0.05, + "maxval": 0.05, + "seed": null + } + }, + "embeddings_regularizer": null, + "activity_regularizer": null, + "embeddings_constraint": null, + "mask_zero": false, + "input_length": 100 + }, + "inbound_nodes": [ + [ + [ + "main_input", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "lstm_1", + "class_name": "LSTM", + "config": { + "name": "lstm_1", + "trainable": true, + "dtype": "float32", + "return_sequences": false, + "return_state": false, + "go_backwards": false, + "stateful": false, + "unroll": false, + "units": 32, + "activation": "tanh", + "recurrent_activation": "sigmoid", + "use_bias": true, + "kernel_initializer": { + "class_name": "VarianceScaling", + "config": { + "scale": 1.0, + "mode": "fan_avg", + "distribution": "uniform", + "seed": null + } + }, + "recurrent_initializer": { + "class_name": "Orthogonal", + "config": { + "gain": 1.0, + "seed": null + } + }, + "bias_initializer": { + "class_name": "Zeros", + "config": {} + }, + "unit_forget_bias": true, + "kernel_regularizer": null, + "recurrent_regularizer": null, + "bias_regularizer": null, + "activity_regularizer": null, + "kernel_constraint": null, + "recurrent_constraint": null, + "bias_constraint": null, + "dropout": 0.0, + "recurrent_dropout": 0.0, + "implementation": 2 + }, + "inbound_nodes": [ + [ + [ + "embedding_1", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "dense_1", + "class_name": "Dense", + "config": { + "name": "dense_1", + "trainable": true, + "dtype": "float32", + "units": 1, + "activation": "sigmoid", + "use_bias": true, + "kernel_initializer": { + "class_name": "VarianceScaling", + "config": { + "scale": 1.0, + "mode": "fan_avg", + "distribution": "uniform", + "seed": null + } + }, + "bias_initializer": { + "class_name": "Zeros", + "config": {} + }, + "kernel_regularizer": null, + "bias_regularizer": null, + "activity_regularizer": null, + "kernel_constraint": null, + "bias_constraint": null + }, + "inbound_nodes": [ + [ + [ + "lstm_1", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "aux_input", + "class_name": "InputLayer", + "config": { + "batch_input_shape": [ + null, + 5 + ], + "dtype": "float32", + "sparse": false, + "name": "aux_input" + }, + "inbound_nodes": [] + }, + { + "name": "concatenate_1", + "class_name": "Concatenate", + "config": { + "name": "concatenate_1", + "trainable": true, + "dtype": "float32", + "axis": -1 + }, + "inbound_nodes": [ + [ + [ + "dense_1", + 0, + 0, + {} + ], + [ + "aux_input", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "dense_2", + "class_name": "Dense", + "config": { + "name": "dense_2", + "trainable": true, + "dtype": "float32", + "units": 64, + "activation": "relu", + "use_bias": true, + "kernel_initializer": { + "class_name": "VarianceScaling", + "config": { + "scale": 1.0, + "mode": "fan_avg", + "distribution": "uniform", + "seed": null + } + }, + "bias_initializer": { + "class_name": "Zeros", + "config": {} + }, + "kernel_regularizer": null, + "bias_regularizer": null, + "activity_regularizer": null, + "kernel_constraint": null, + "bias_constraint": null + }, + "inbound_nodes": [ + [ + [ + "concatenate_1", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "dense_3", + "class_name": "Dense", + "config": { + "name": "dense_3", + "trainable": true, + "dtype": "float32", + "units": 64, + "activation": "relu", + "use_bias": true, + "kernel_initializer": { + "class_name": "VarianceScaling", + "config": { + "scale": 1.0, + "mode": "fan_avg", + "distribution": "uniform", + "seed": null + } + }, + "bias_initializer": { + "class_name": "Zeros", + "config": {} + }, + "kernel_regularizer": null, + "bias_regularizer": null, + "activity_regularizer": null, + "kernel_constraint": null, + "bias_constraint": null + }, + "inbound_nodes": [ + [ + [ + "dense_2", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "dense_4", + "class_name": "Dense", + "config": { + "name": "dense_4", + "trainable": true, + "dtype": "float32", + "units": 64, + "activation": "relu", + "use_bias": true, + "kernel_initializer": { + "class_name": "VarianceScaling", + "config": { + "scale": 1.0, + "mode": "fan_avg", + "distribution": "uniform", + "seed": null + } + }, + "bias_initializer": { + "class_name": "Zeros", + "config": {} + }, + "kernel_regularizer": null, + "bias_regularizer": null, + "activity_regularizer": null, + "kernel_constraint": null, + "bias_constraint": null + }, + "inbound_nodes": [ + [ + [ + "dense_3", + 0, + 0, + {} + ] + ] + ] + }, + { + "name": "dense_5", + "class_name": "Dense", + "config": { + "name": "dense_5", + "trainable": true, + "dtype": "float32", + "units": 1, + "activation": "sigmoid", + "use_bias": true, + "kernel_initializer": { + "class_name": "VarianceScaling", + "config": { + "scale": 1.0, + "mode": "fan_avg", + "distribution": "uniform", + "seed": null + } + }, + "bias_initializer": { + "class_name": "Zeros", + "config": {} + }, + "kernel_regularizer": null, + "bias_regularizer": null, + "activity_regularizer": null, + "kernel_constraint": null, + "bias_constraint": null + }, + "inbound_nodes": [ + [ + [ + "dense_4", + 0, + 0, + {} + ] + ] + ] + } + ], + "input_layers": [ + [ + "main_input", + 0, + 0 + ], + [ + "aux_input", + 0, + 0 + ] + ], + "output_layers": [ + [ + "dense_1", + 0, + 0 + ], + [ + "dense_5", + 0, + 0 + ] + ] + }, + "keras_version": "2.3.1", + "backend": "tensorflow" +} \ No newline at end of file