Mercurial > repos > bgruening > nanopolish_eventalign
changeset 4:d219b6d8158a draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/nanopolish commit 25c22b467760e4784e199125292927bd2274a189-dirty
| author | bgruening |
|---|---|
| date | Sun, 23 Jun 2019 05:36:00 -0400 |
| parents | 0938217b3221 |
| children | 8fdb079ddaf0 |
| files | nanopolish_eventalign.xml |
| diffstat | 1 files changed, 4 insertions(+), 4 deletions(-) [+] |
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--- a/nanopolish_eventalign.xml Tue Jun 18 12:42:00 2019 -0400 +++ b/nanopolish_eventalign.xml Sun Jun 23 05:36:00 2019 -0400 @@ -1,4 +1,4 @@ -<tool id="nanopolish_eventalign" name="Nanopolish eventalign" version="0.1.0"> +<tool id="nanopolish_eventalign" name="Nanopolish eventalign" version="0.11.1"> <description>- Align nanopore events to reference k-mers</description> <macros> <import>macros.xml</import> @@ -67,7 +67,7 @@ <inputs> <!-- index inputs --> <param type="data" name="input_merged" format="fasta,fastq" label="Basecalled merged reads.fa"/> - <param type="data" name="input_reads_raw" format="h5,fast5.tar.gz,fast5.tar.bz2,fast5.tar" label="Flat archive file of raw fast5 files"/> + <param type="data" name="input_reads_raw" format="fast5.tar.gz,fast5.tar.bz2,fast5.tar" label="Flat archive file of raw fast5 files"/> <!-- variants consensus inputs --> <param type="data" argument="-b" format="bam" label="Reads aligned to the reference genome" /> @@ -161,8 +161,8 @@ <param name="input_merged" ftype="fasta" value="reads.fasta" /> <param name="input_reads_raw" ftype="fast5.tar.gz" value="fast5_files.tar.gz" /> <param name="b" value="reads.sorted.bam" /> - <param name="reference_source_selector" value="cached" /> - <param name="ref_file" value="draft"/> + <param name="reference_source_selector" value="history" /> + <param name="ref_file" value="draft.fa"/> <param name="w" value="tig00000001:200000-200010" /> <param name="sam" value="false" /> <param name="summary" value="false" />